RNA–Protein interactions for RNA: ENST00000423296.6

WDR48-204, Transcript of WD repeat domain 48, humanhuman

TSL 4

Gene WDR48, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-204ENST00000423296 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
WDR48-204ENST00000423296 CHIC1Q5VXU3 224 aa22.03■■□□□ 1.12
WDR48-204ENST00000423296 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
WDR48-204ENST00000423296 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
WDR48-204ENST00000423296 FOXD1Q16676 465 aa18.63■□□□□ 0.57
WDR48-204ENST00000423296 MSH5O43196 834 aa17.56■□□□□ 0.4
WDR48-204ENST00000423296 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
WDR48-204ENST00000423296 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
WDR48-204ENST00000423296 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
WDR48-204ENST00000423296 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
WDR48-204ENST00000423296 ADRA2BP18089 450 aa17.2■□□□□ 0.34
WDR48-204ENST00000423296 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
WDR48-204ENST00000423296 DMRT2Q9Y5R5 561 aa15.82■□□□□ 0.12
WDR48-204ENST00000423296 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
WDR48-204ENST00000423296 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
WDR48-204ENST00000423296 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
WDR48-204ENST00000423296 CACNB1Q02641 598 aaPredicted RBP15.18■□□□□ 0.02
WDR48-204ENST00000423296 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
WDR48-204ENST00000423296 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
WDR48-204ENST00000423296 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
WDR48-204ENST00000423296 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
WDR48-204ENST00000423296 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
WDR48-204ENST00000423296 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
WDR48-204ENST00000423296 DNAJC5BQ9UF47 199 aa14.69□□□□□ -0.06
WDR48-204ENST00000423296 NISCHQ9Y2I1 1504 aa14.54□□□□□ -0.08
WDR48-204ENST00000423296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
WDR48-204ENST00000423296 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
WDR48-204ENST00000423296 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
WDR48-204ENST00000423296 KCNA4P22459 653 aa14.02□□□□□ -0.17
WDR48-204ENST00000423296 CAPN15O75808 1086 aa13.99□□□□□ -0.17
WDR48-204ENST00000423296 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
WDR48-204ENST00000423296 DSG3P32926 999 aa13.92□□□□□ -0.18
WDR48-204ENST00000423296 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
WDR48-204ENST00000423296 APLP2Q06481 763 aa13.79□□□□□ -0.2
WDR48-204ENST00000423296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
WDR48-204ENST00000423296 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
WDR48-204ENST00000423296 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
WDR48-204ENST00000423296 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
WDR48-204ENST00000423296 ABCB7O75027 752 aa13.63□□□□□ -0.23
WDR48-204ENST00000423296 POTEHQ6S545 545 aa13.62□□□□□ -0.23
WDR48-204ENST00000423296 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
WDR48-204ENST00000423296 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
WDR48-204ENST00000423296 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
WDR48-204ENST00000423296 POLA2Q14181 598 aa13.3□□□□□ -0.28
WDR48-204ENST00000423296 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
WDR48-204ENST00000423296 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
WDR48-204ENST00000423296 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
WDR48-204ENST00000423296 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
WDR48-204ENST00000423296 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
WDR48-204ENST00000423296 ABCC9O60706 1549 aa13.03□□□□□ -0.32
WDR48-204ENST00000423296 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
WDR48-204ENST00000423296 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
WDR48-204ENST00000423296 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
WDR48-204ENST00000423296 ZBTB22O15209 634 aa12.86□□□□□ -0.35
WDR48-204ENST00000423296 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
WDR48-204ENST00000423296 ATXN8OSP0DMR3 200 aa12.8□□□□□ -0.36
WDR48-204ENST00000423296 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
WDR48-204ENST00000423296 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
WDR48-204ENST00000423296 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
WDR48-204ENST00000423296 FBLN2P98095 1184 aa12.66□□□□□ -0.38
WDR48-204ENST00000423296 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
WDR48-204ENST00000423296 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
WDR48-204ENST00000423296 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
WDR48-204ENST00000423296 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
WDR48-204ENST00000423296 HAX1O00165 279 aa12.58□□□□□ -0.4
WDR48-204ENST00000423296 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
WDR48-204ENST00000423296 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
WDR48-204ENST00000423296 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
WDR48-204ENST00000423296 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
WDR48-204ENST00000423296 DCAF8L2P0C7V8 631 aa12.41□□□□□ -0.42
WDR48-204ENST00000423296 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
WDR48-204ENST00000423296 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
WDR48-204ENST00000423296 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
WDR48-204ENST00000423296 EVX2Q03828 476 aa12.33□□□□□ -0.44
WDR48-204ENST00000423296 NACADO15069 1562 aa12.32□□□□□ -0.44
WDR48-204ENST00000423296 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
WDR48-204ENST00000423296 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
WDR48-204ENST00000423296 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
WDR48-204ENST00000423296 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
WDR48-204ENST00000423296 MYO15BQ96JP2 1530 aa12.15□□□□□ -0.46
WDR48-204ENST00000423296 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
WDR48-204ENST00000423296 GABBR2O75899 941 aa12.09□□□□□ -0.47
WDR48-204ENST00000423296 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
WDR48-204ENST00000423296 ZCCHC6Q5VYS8 1495 aaKnown RBP12.03□□□□□ -0.48
WDR48-204ENST00000423296 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
WDR48-204ENST00000423296 DCAF1Q9Y4B6 1507 aa12□□□□□ -0.49
WDR48-204ENST00000423296 BICRAQ9NZM4 1560 aa12□□□□□ -0.49
WDR48-204ENST00000423296 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
WDR48-204ENST00000423296 LHX8Q68G74 356 aa11.9□□□□□ -0.5
WDR48-204ENST00000423296 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
WDR48-204ENST00000423296 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
WDR48-204ENST00000423296 CLCN6P51797 869 aa11.89□□□□□ -0.51
WDR48-204ENST00000423296 SCRIBQ14160 1630 aa11.87□□□□□ -0.51
WDR48-204ENST00000423296 SHROOM4Q9ULL8 1493 aa11.85□□□□□ -0.51
WDR48-204ENST00000423296 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
WDR48-204ENST00000423296 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
WDR48-204ENST00000423296 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
WDR48-204ENST00000423296 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
WDR48-204ENST00000423296 ZNF579Q8NAF0 562 aaKnown RBP11.77□□□□□ -0.53
WDR48-204ENST00000423296 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms