RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Ftsj3Q9DBE9 838 aaKnown RBP11.42□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Slc4a3P16283 1227 aa11.42□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Card11Q8CIS0 1159 aa11.42□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Iqcf3Q9D498 203 aa11.4□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Tpm3-rs7D3Z2H9 248 aa11.4□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Tpm3P21107 285 aaKnown RBP11.4□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Rgl3Q3UYI5 709 aa11.4□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Neurod2Q62414 383 aa11.4□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Rsph3aQ3UFY4 516 aa11.39□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Rtn4Q99P72 1162 aaKnown RBP11.39□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Cwc15Q9JHS9 229 aaKnown RBP11.39□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Setd5Q5XJV7 1441 aa11.37□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Zrsr2Q62377 462 aaKnown RBP11.37□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Gm6268A2A3U9 297 aa11.37□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Kif3aP28741 701 aa11.37□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Gpatch11Q3UFS4 262 aa11.36□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Armcx1Q9CX83 456 aa11.36□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Fam43aQ8BUP8 424 aa11.36□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Q8BT18 775 aa11.36□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Mia2Q91ZV0 1396 aa11.35□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Ralbp1Q62172 648 aa11.35□□□□□ -0.59
Ptpre-204ENSMUST00000209979 IqubQ8CDK3 788 aa11.35□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Ipo4Q8VI75 1082 aa11.35□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Gtf2a1Q99PM3 378 aa11.35□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Anp32eP97822 260 aaKnown RBP11.35□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Sart3Q9JLI8 962 aaKnown RBP11.34□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Anapc15P60007 132 aa11.34□□□□□ -0.59
Ptpre-204ENSMUST00000209979 Mrvi1Q9WUX5 899 aaKnown RBP11.33□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Fhad1A6PWD2 1420 aa11.33□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Plcd4Q8K3R3 807 aa11.33□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Ccdc173A0JLY1 547 aa11.32□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Sh3bp5Q9Z131 463 aa11.32□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Nolc1E9Q5C9 702 aaKnown RBP11.31□□□□□ -0.6
Ptpre-204ENSMUST00000209979 CgnP59242 1191 aa11.31□□□□□ -0.6
Ptpre-204ENSMUST00000209979 AampJ3QN89 436 aa11.31□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Iffo2Q8R2V2 512 aa11.31□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Mfap1aC0HKD8 439 aaKnown RBP11.31□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Mfap1bC0HKD9 439 aaKnown RBP11.31□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Zscan21Q07231 555 aa11.3□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Sf3a1Q8K4Z5 791 aaKnown RBP11.3□□□□□ -0.6
Ptpre-204ENSMUST00000209979 ChgaP26339 463 aaKnown RBP11.28□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Znf771Q8BJ90 317 aa11.28□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Chaf1aQ9QWF0 911 aa11.28□□□□□ -0.6
Ptpre-204ENSMUST00000209979 EzrP26040 586 aaKnown RBP11.28□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Tpm1P58771 284 aa11.27□□□□□ -0.6
Ptpre-204ENSMUST00000209979 Cgnl1Q6AW69 1298 aa11.27□□□□□ -0.61
Ptpre-204ENSMUST00000209979 CntlnA2AM05 1397 aa11.27□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Srpk2O54781 681 aaKnown RBP11.27□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Golga3P55937 1487 aa11.27□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Dnai2A2AC93 623 aa11.27□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Isy1Q69ZQ2 285 aaKnown RBP11.27□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Rsf1E9PWW9 1441 aaKnown RBP11.27□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Eea1Q8BL66 1411 aa11.26□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Ylpm1Q9R0I7 1386 aaKnown RBP11.26□□□□□ -0.61
Ptpre-204ENSMUST00000209979 St18Q80TY4 1045 aa11.25□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Exosc9Q9JHI7 438 aaKnown RBP11.25□□□□□ -0.61
Ptpre-204ENSMUST00000209979 NacadQ5SWP3 1504 aa11.25□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Safb2Q80YR5 991 aaKnown RBP11.25□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Rassf8Q8CJ96 419 aa11.25□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Phf14Q9D4H9 881 aa11.25□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Hmgn5Q9JL35 406 aa11.25□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Def6Q8C2K1 630 aa11.24□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Speer4f1Q9D5Q6 258 aa11.24□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Ipo7Q9EPL8 1038 aaKnown RBP11.24□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Kif3cO35066 796 aa11.24□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Znhit6Q3UFB2 460 aaKnown RBP11.24□□□□□ -0.61
Ptpre-204ENSMUST00000209979 IbspQ61711 324 aa11.24□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Pnmal2G3X9N3 661 aa11.24□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Mroh3A0A1D5RM54 893 aa11.23□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Dctn1O08788 1281 aa11.23□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Casq1O09165 405 aa11.23□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Grwd1Q810D6 446 aaKnown RBP11.23□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Exoc6Q8R313 802 aa11.23□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Gps2Q921N8 327 aa11.23□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Kif4P33174 1231 aa11.23□□□□□ -0.61
Ptpre-204ENSMUST00000209979 NaspQ99MD9 773 aaKnown RBP11.22□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Gm20521D3Z5F7 333 aa11.22□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Gripap1Q8VD04 806 aa11.22□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Tpd52l1O54818 204 aa11.22□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Trim55G3X8Y1 545 aa11.21□□□□□ -0.61
Ptpre-204ENSMUST00000209979 Ccdc18Q640L5 1455 aa11.21□□□□□ -0.61
Ptpre-204ENSMUST00000209979 A0A1L1SQF0 893 aa11.21□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Rufy1Q8BIJ7 712 aa11.2□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Tomm22Q9CPQ3 142 aa11.2□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Nap1l3Q794H2 544 aa11.2□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Ccer1Q9CQL2 403 aa11.2□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Sh3bgrQ9WUZ7 214 aa11.2□□□□□ -0.62
Ptpre-204ENSMUST00000209979 MecomP14404 1042 aa11.19□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Fam13bQ8K2H3 851 aa11.19□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Kif15Q6P9L6 1387 aa11.19□□□□□ -0.62
Ptpre-204ENSMUST00000209979 CrebrfQ8CDG5 640 aaKnown RBP11.18□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Baz1aO88379 1555 aa11.18□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Eif4g2Q62448 906 aaKnown RBP11.18□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Irx6Q9ER75 438 aa11.18□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Filip1lQ6P6L0 1131 aa11.18□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Dhx8A2A4P0 1244 aaKnown RBP11.18□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Mns1Q61884 491 aa11.18□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Kdm2aP59997 1161 aa11.17□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Utp3Q9JI13 469 aaKnown RBP11.17□□□□□ -0.62
Ptpre-204ENSMUST00000209979 Srek1Q8BZX4 494 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms