RNA–Protein interactions for RNA: ENSMUST00000036579.13

Vps13d-202, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Vps13d, Length 15,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-202ENSMUST00000036579 Sh3bp5Q9Z131 463 aa5,99□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Dusp9Q7TNL7 452 aa5,99□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Smarce1O54941 411 aaKnown RBP5,98□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Prm3Q62100 101 aa5,98□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Atp6v1dP57746 247 aa5,98□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Tpm3-rs7D3Z2H9 248 aa5,98□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Exosc9Q9JHI7 438 aaKnown RBP5,98□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Eif4g2Q62448 906 aaKnown RBP5,98□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Mre11Q61216 706 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 R3hcc1Q8BSI6 488 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Hsp90b1P08113 802 aaKnown RBP5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Ubl4bQ9CQ84 188 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Chmp5Q9D7S9 219 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Tpm2P58774 284 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Noc3lQ8VI84 807 aaKnown RBP5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Setd5Q5XJV7 1441 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 AampJ3QN89 436 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Card11Q8CIS0 1159 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Kiaa0754Q69ZZ9 979 aa5,97□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Pcmtd1P59913 357 aa5,96□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Anapc15P60007 132 aa5,96□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Rassf8Q8CJ96 419 aa5,96□□□□□ -1,45
Vps13d-202ENSMUST00000036579 MyclP10166 368 aa5,96□□□□□ -1,45
Vps13d-202ENSMUST00000036579 Mical1Q8VDP3 1048 aa5,96□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Sart3Q9JLI8 962 aaKnown RBP5,96□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Eea1Q8BL66 1411 aa5,96□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Trim30aP15533 496 aa5,96□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Srpk2O54781 681 aaKnown RBP5,95□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Taf3Q5HZG4 932 aa5,95□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Stk24Q99KH8 431 aa5,95□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Cnga1P29974 684 aa5,95□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Zrsr2Q62377 462 aaKnown RBP5,95□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Plin1Q8CGN5 517 aa5,95□□□□□ -1,46
Vps13d-202ENSMUST00000036579 SafbD3YXK2 937 aaKnown RBP5,95□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Gpatch11Q3UFS4 262 aa5,94□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Ccdc34Q3UI66 367 aa5,94□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Mroh3A0A1D5RM54 893 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Gm35339A0A140LHH9 1649 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Rsph3aQ3UFY4 516 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Gtf2a1Q99PM3 378 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 PrkcshO08795 521 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Tmf1B9EKI3 1091 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Ipo4Q8VI75 1082 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Q8BT18 775 aa5,93□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Kif3aP28741 701 aa5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Cwc15Q9JHS9 229 aaKnown RBP5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Phf14Q9D4H9 881 aa5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Anp32eP97822 260 aaKnown RBP5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 CgnP59242 1191 aa5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Fam43aQ8BUP8 424 aa5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Abcc8B2RUS7 1588 aa5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Stag3O70576 1240 aa5,92□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Tnnt1O88346 262 aa5,91□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Cgnl1Q6AW69 1298 aa5,91□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Isy1Q69ZQ2 285 aaKnown RBP5,91□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Podxl2Q8CAE9 603 aa5,91□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Senp3Q9EP97 568 aaKnown RBP5,9□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Tpm3P21107 285 aaKnown RBP5,9□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Ftsj3Q9DBE9 838 aaKnown RBP5,9□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Fhad1A6PWD2 1420 aa5,9□□□□□ -1,46
Vps13d-202ENSMUST00000036579 Zscan21Q07231 555 aa5,9□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Mtus2Q3UHD3 1353 aa5,9□□□□□ -1,47
Vps13d-202ENSMUST00000036579 U2surpQ6NV83 1029 aaKnown RBP5,89□□□□□ -1,47
Vps13d-202ENSMUST00000036579 A0A1L1SQF0 893 aa5,89□□□□□ -1,47
Vps13d-202ENSMUST00000036579 St18Q80TY4 1045 aa5,89□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Stard8Q8K031 1019 aa5,89□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Tpm4Q6IRU2 248 aa5,89□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Iffo2Q8R2V2 512 aa5,89□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Chaf1aQ9QWF0 911 aa5,89□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Chmp4cQ9D7F7 232 aa5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Rrp7aQ9D1C9 280 aaKnown RBP5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Plcd4Q8K3R3 807 aa5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Ccdc173A0JLY1 547 aa5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Ccdc47Q9D024 483 aaKnown RBP5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Rock2P70336 1388 aa5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Nolc1E9Q5C9 702 aaKnown RBP5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Tpm1P58771 284 aa5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 IbspQ61711 324 aa5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 CrebrfQ8CDG5 640 aaKnown RBP5,88□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Dhx8A2A4P0 1244 aaKnown RBP5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Ubap1lG3UW59 384 aa5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Ralbp1Q62172 648 aa5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Rb1cc1Q9ESK9 1588 aa5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 EzrP26040 586 aaKnown RBP5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Samd1D3YXK1 519 aa5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Rtf1A2AQ19 715 aaKnown RBP5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Ggt6Q6PDE7 497 aa5,87□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Stk26Q99JT2 416 aa5,86□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Vps53Q8CCB4 832 aa5,86□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Arid4aF8VPQ2 1261 aaKnown RBP5,86□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Arhgap27A2AB59 869 aa5,86□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Mrvi1Q9WUX5 899 aaKnown RBP5,86□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Nol10Q5RJG1 687 aaKnown RBP5,86□□□□□ -1,47
Vps13d-202ENSMUST00000036579 MecomP14404 1042 aa5,85□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Kif3cO35066 796 aa5,85□□□□□ -1,47
Vps13d-202ENSMUST00000036579 SlkO54988 1233 aa5,85□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Hook1Q8BIL5 728 aa5,85□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Gps2Q921N8 327 aa5,85□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Znf330Q922H9 316 aa5,85□□□□□ -1,47
Vps13d-202ENSMUST00000036579 Ncbp3Q8BZR9 615 aaKnown RBP5,85□□□□□ -1,47
Retrieved 100 of 22,080 RNA–protein pairs in 21,6 ms