RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 AI481877A2ALV5 1481 aa29,93■■■□□ 2,38
Trim47-201ENSMUST00000021120 Igf1rQ60751 1373 aa29,93■■■□□ 2,38
Trim47-201ENSMUST00000021120 1700123L14RikQ3V2K7 440 aa29,91■■■□□ 2,38
Trim47-201ENSMUST00000021120 Wdr7Q920I9 1489 aa29,88■■■□□ 2,37
Trim47-201ENSMUST00000021120 Fam208aQ69ZR9 1610 aaKnown RBP29,88■■■□□ 2,37
Trim47-201ENSMUST00000021120 Adcy10Q8C0T9 1614 aa29,87■■■□□ 2,37
Trim47-201ENSMUST00000021120 Col17a1Q07563 1470 aa29,86■■■□□ 2,37
Trim47-201ENSMUST00000021120 Ifnlr1Q8CGK5 535 aa29,86■■■□□ 2,37
Trim47-201ENSMUST00000021120 Gm156Q58A37 223 aa29,85■■■□□ 2,37
Trim47-201ENSMUST00000021120 Adgrl3Q80TS3 1537 aa29,85■■■□□ 2,37
Trim47-201ENSMUST00000021120 Atp10dQ8K2X1 1416 aa29,85■■■□□ 2,37
Trim47-201ENSMUST00000021120 Arhgef40Q3UPH7 1517 aa29,82■■■□□ 2,36
Trim47-201ENSMUST00000021120 Abca8bQ8K440 1620 aa29,82■■■□□ 2,36
Trim47-201ENSMUST00000021120 A2mQ6GQT1 1474 aa29,81■■■□□ 2,36
Trim47-201ENSMUST00000021120 Lrrc9Q8CDN9 1456 aa29,81■■■□□ 2,36
Trim47-201ENSMUST00000021120 Znf608Q56A10 1511 aa29,8■■■□□ 2,36
Trim47-201ENSMUST00000021120 Fam50aQ9WV03 339 aaKnown RBP29,77■■■□□ 2,36
Trim47-201ENSMUST00000021120 Mlh3A0A1Y7VMP7 1443 aa29,77■■■□□ 2,36
Trim47-201ENSMUST00000021120 Aebp2Q9Z248 504 aaKnown RBP29,74■■■□□ 2,35
Trim47-201ENSMUST00000021120 Rnf17Q99MV7 1640 aa29,73■■■□□ 2,35
Trim47-201ENSMUST00000021120 Kdm6bQ5NCY0 1641 aa29,73■■■□□ 2,35
Trim47-201ENSMUST00000021120 ClspnQ80YR7 1315 aa29,72■■■□□ 2,35
Trim47-201ENSMUST00000021120 Caskin1Q6P9K8 1431 aa29,72■■■□□ 2,35
Trim47-201ENSMUST00000021120 Naip2Q9QUK4 1447 aa29,7■■■□□ 2,35
Trim47-201ENSMUST00000021120 Ak9G3UYQ4 1894 aa29,69■■■□□ 2,34
Trim47-201ENSMUST00000021120 Arhgap5P97393 1501 aa29,69■■■□□ 2,34
Trim47-201ENSMUST00000021120 Plekhh2Q8C115 1491 aa29,69■■■□□ 2,34
Trim47-201ENSMUST00000021120 Setbp1Q9Z180 1582 aa29,68■■■□□ 2,34
Trim47-201ENSMUST00000021120 Tdrd9Q14BI7 1383 aa29,68■■■□□ 2,34
Trim47-201ENSMUST00000021120 Cdk11bP24788 784 aaKnown RBP29,67■■■□□ 2,34
Trim47-201ENSMUST00000021120 Abcc5Q9R1X5 1436 aa29,66■■■□□ 2,34
Trim47-201ENSMUST00000021120 Csrnp3P59055 597 aa29,66■■■□□ 2,34
Trim47-201ENSMUST00000021120 Mia2Q91ZV0 1396 aa29,64■■■□□ 2,34
Trim47-201ENSMUST00000021120 Arid3cA6PWV5 409 aa29,64■■■□□ 2,34
Trim47-201ENSMUST00000021120 Mtus2Q3UHD3 1353 aa29,63■■■□□ 2,33
Trim47-201ENSMUST00000021120 Wdr66E9Q743 1299 aa29,61■■■□□ 2,33
Trim47-201ENSMUST00000021120 UacaQ8CGB3 1411 aa29,6■■■□□ 2,33
Trim47-201ENSMUST00000021120 Chic2Q9D9G3 165 aa29,6■■■□□ 2,33
Trim47-201ENSMUST00000021120 Fhad1A6PWD2 1420 aa29,58■■■□□ 2,33
Trim47-201ENSMUST00000021120 Gm32742A0A1B0GT42 1604 aa29,58■■■□□ 2,33
Trim47-201ENSMUST00000021120 Pprc1Q6NZN1 1644 aa29,56■■■□□ 2,32
Trim47-201ENSMUST00000021120 Pdcd11Q6NS46 1862 aaKnown RBP29,56■■■□□ 2,32
Trim47-201ENSMUST00000021120 Cfap74Q3UY96 1578 aa29,55■■■□□ 2,32
Trim47-201ENSMUST00000021120 Vps8Q0P5W1 1427 aa29,54■■■□□ 2,32
Trim47-201ENSMUST00000021120 Nop58Q6DFW4 536 aaKnown RBP29,53■■■□□ 2,32
Trim47-201ENSMUST00000021120 Cabp1Q9JLK7 227 aa29,52■■■□□ 2,32
Trim47-201ENSMUST00000021120 Zfyve16Q80U44 1528 aa29,51■■■□□ 2,31
Trim47-201ENSMUST00000021120 Aplp2Q06335 707 aa29,49■■■□□ 2,31
Trim47-201ENSMUST00000021120 Rfx7F8VPJ6 1459 aa29,49■■■□□ 2,31
Trim47-201ENSMUST00000021120 Trappc8E9PWG2 1437 aa29,48■■■□□ 2,31
Trim47-201ENSMUST00000021120 DiexfQ8BTT6 772 aaKnown RBP29,47■■■□□ 2,31
Trim47-201ENSMUST00000021120 Il16O54824 1322 aa29,46■■■□□ 2,31
Trim47-201ENSMUST00000021120 Kdm3bQ6ZPY7 1562 aa29,44■■■□□ 2,3
Trim47-201ENSMUST00000021120 Abcc3B2RX12 1523 aa29,43■■■□□ 2,3
Trim47-201ENSMUST00000021120 SphkapQ6NSW3 1687 aa29,43■■■□□ 2,3
Trim47-201ENSMUST00000021120 Ttbk1Q6PCN3 1308 aa29,42■■■□□ 2,3
Trim47-201ENSMUST00000021120 Clasp1Q80TV8 1535 aaKnown RBP29,41■■■□□ 2,3
Trim47-201ENSMUST00000021120 TonslQ6NZL6 1363 aa29,4■■■□□ 2,3
Trim47-201ENSMUST00000021120 NclP09405 707 aaKnown RBP29,4■■■□□ 2,3
Trim47-201ENSMUST00000021120 Abca9Q8K449 1623 aa29,4■■■□□ 2,3
Trim47-201ENSMUST00000021120 Hecw1Q8K4P8 1604 aa29,39■■■□□ 2,3
Trim47-201ENSMUST00000021120 Kidins220E9Q9B7 1793 aa29,39■■■□□ 2,3
Trim47-201ENSMUST00000021120 Adgrb2Q8CGM1 1561 aa29,37■■■□□ 2,29
Trim47-201ENSMUST00000021120 Fmn2Q9JL04 1578 aa29,37■■■□□ 2,29
Trim47-201ENSMUST00000021120 Sart1Q9Z315 806 aaKnown RBP29,36■■■□□ 2,29
Trim47-201ENSMUST00000021120 Ppp1r18Q8BQ30 594 aa29,34■■■□□ 2,29
Trim47-201ENSMUST00000021120 Dennd4bQ3U1Y4 1499 aa29,33■■■□□ 2,29
Trim47-201ENSMUST00000021120 Depdc5P61460 1591 aa29,32■■■□□ 2,28
Trim47-201ENSMUST00000021120 Ube2uB1AUC4 352 aa29,31■■■□□ 2,28
Trim47-201ENSMUST00000021120 Cdc42bpbQ7TT50 1713 aa29,31■■■□□ 2,28
Trim47-201ENSMUST00000021120 Mast1Q9R1L5 1570 aa29,3■■■□□ 2,28
Trim47-201ENSMUST00000021120 Ttc37F8VPK0 1563 aa29,29■■■□□ 2,28
Trim47-201ENSMUST00000021120 Ccer2J3QPU5 274 aa29,28■■■□□ 2,28
Trim47-201ENSMUST00000021120 AglF8VPN4 1532 aa29,28■■■□□ 2,28
Trim47-201ENSMUST00000021120 Neurl4Q5NCX5 1563 aa29,28■■■□□ 2,28
Trim47-201ENSMUST00000021120 Adgrl2Q8JZZ7 1487 aa29,25■■■□□ 2,27
Trim47-201ENSMUST00000021120 Dnajc5P60904 198 aa29,22■■■□□ 2,27
Trim47-201ENSMUST00000021120 Lemd3Q9WU40 921 aa29,21■■■□□ 2,27
Trim47-201ENSMUST00000021120 Rrp7aQ9D1C9 280 aaKnown RBP29,2■■■□□ 2,26
Trim47-201ENSMUST00000021120 Fhod3Q76LL6 1578 aa29,18■■■□□ 2,26
Trim47-201ENSMUST00000021120 AlkP97793 1621 aa29,16■■■□□ 2,26
Trim47-201ENSMUST00000021120 OvosQ3UU35 1456 aa29,14■■■□□ 2,25
Trim47-201ENSMUST00000021120 Prdm16A2A935 1275 aa29,13■■■□□ 2,25
Trim47-201ENSMUST00000021120 Eid3Q3V124 375 aa29,13■■■□□ 2,25
Trim47-201ENSMUST00000021120 Zfp644E9QA22 1323 aa29,11■■■□□ 2,25
Trim47-201ENSMUST00000021120 Ankrd36D3Z4K0 1415 aa29,1■■■□□ 2,25
Trim47-201ENSMUST00000021120 AdgbG3UZ78 1657 aa29,09■■■□□ 2,25
Trim47-201ENSMUST00000021120 Map3k5O35099 1380 aa29,09■■■□□ 2,25
Trim47-201ENSMUST00000021120 Ssh2Q5SW75 1423 aa29,08■■■□□ 2,25
Trim47-201ENSMUST00000021120 Kdm5cP41230 1554 aa29,08■■■□□ 2,25
Trim47-201ENSMUST00000021120 Ppargc1bQ8VHJ7 1014 aa29,06■■■□□ 2,24
Trim47-201ENSMUST00000021120 Kiaa0556Q8C753 1610 aa29,06■■■□□ 2,24
Trim47-201ENSMUST00000021120 Bcl11aQ9QYE3 773 aa29,03■■■□□ 2,24
Trim47-201ENSMUST00000021120 Trpm2Q91YD4 1506 aa29,02■■■□□ 2,24
Trim47-201ENSMUST00000021120 Mphosph9A6H5Y1 991 aa29,02■■■□□ 2,24
Trim47-201ENSMUST00000021120 Xrn1P97789 1719 aaKnown RBP29,02■■■□□ 2,24
Trim47-201ENSMUST00000021120 Nup155Q99P88 1391 aaKnown RBP29,01■■■□□ 2,23
Trim47-201ENSMUST00000021120 Lamc1P02468 1607 aaKnown RBP29■■■□□ 2,23
Trim47-201ENSMUST00000021120 Abca17E9PX95 1733 aa29■■■□□ 2,23
Trim47-201ENSMUST00000021120 Atp10aO54827 1508 aa28,99■■■□□ 2,23
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms