RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 PEP5P12868 1029 aa-0.5□□□□□ -2.49
snR38snR38 EST1P17214 699 aaPredicted RBP-0.5□□□□□ -2.49
snR38snR38 RPI1P23250 407 aaKnown RBP-0.5□□□□□ -2.49
snR38snR38 AAT2P23542 418 aaKnown RBP-0.5□□□□□ -2.49
snR38snR38 PGS1P25578 521 aa-0.5□□□□□ -2.49
snR38snR38 RML2P32611 393 aa-0.5□□□□□ -2.49
snR38snR38 YBL081WP38180 368 aaKnown RBP-0.5□□□□□ -2.49
snR38snR38 ARP1P38696 384 aa-0.5□□□□□ -2.49
snR38snR38 PFS1P38872 237 aa-0.5□□□□□ -2.49
snR38snR38 YIL161WP40449 235 aaKnown RBP-0.5□□□□□ -2.49
snR38snR38 VHS2P40463 436 aa-0.5□□□□□ -2.49
snR38snR38 YGR237CP50089 785 aa-0.5□□□□□ -2.49
snR38snR38 PYK2P52489 506 aaKnown RBP-0.5□□□□□ -2.49
snR38snR38 PCP1P53259 346 aa-0.5□□□□□ -2.49
snR38snR38 CBK1P53894 756 aa-0.5□□□□□ -2.49
snR38snR38 ADA2Q02336 434 aa-0.5□□□□□ -2.49
snR38snR38 SHR3Q02774 210 aa-0.5□□□□□ -2.49
snR38snR38 SLD5Q03406 294 aa-0.5□□□□□ -2.49
snR38snR38 YDR239CQ03780 787 aa-0.5□□□□□ -2.49
snR38snR38 NTG2Q08214 380 aa-0.5□□□□□ -2.49
snR38snR38 RPS19AP07280 144 aaKnown RBP-0.51□□□□□ -2.49
snR38snR38 RPS19BP07281 144 aaPredicted RBP-0.51□□□□□ -2.49
snR38snR38 PET122P10355 254 aa-0.51□□□□□ -2.49
snR38snR38 SPO16P17122 198 aa-0.51□□□□□ -2.49
snR38snR38 PRR1P28708 518 aa-0.51□□□□□ -2.49
snR38snR38 RTC2P38279 296 aa-0.51□□□□□ -2.49
snR38snR38 DBP8P38719 431 aa-0.51□□□□□ -2.49
snR38snR38 AVT4P50944 713 aa-0.51□□□□□ -2.49
snR38snR38 DUG3P53871 357 aa-0.51□□□□□ -2.49
snR38snR38 EMI2Q04409 500 aaKnown RBP-0.51□□□□□ -2.49
snR38snR38 TAF7Q05021 590 aa-0.51□□□□□ -2.49
snR38snR38 PEX15Q08215 383 aa-0.51□□□□□ -2.49
snR38snR38 PHO81P17442 1178 aa-0.52□□□□□ -2.49
snR38snR38 CDC15P27636 974 aa-0.52□□□□□ -2.49
snR38snR38 CBF5P33322 483 aaKnown RBP RIP-Chip data-0.52□□□□□ -2.49not detected
snR38snR38 SER1P33330 395 aaKnown RBP-0.52□□□□□ -2.49
snR38snR38 YKL023WP36103 277 aaKnown RBP-0.52□□□□□ -2.49
snR38snR38 ANS1P38832 159 aa-0.52□□□□□ -2.49
snR38snR38 FAU1P40099 211 aa-0.52□□□□□ -2.49
snR38snR38 NUP82P40368 713 aa-0.52□□□□□ -2.49
snR38snR38 CAB2P40506 365 aa-0.52□□□□□ -2.49
snR38snR38 OST1P41543 476 aaKnown RBP-0.52□□□□□ -2.49
snR38snR38 DPB11P47027 764 aaPredicted RBP-0.52□□□□□ -2.49
snR38snR38 YGR067CP53243 804 aa-0.52□□□□□ -2.49
snR38snR38 MTQ2Q03920 221 aaPredicted RBP-0.52□□□□□ -2.49
snR38snR38 PDS5Q04264 1277 aa-0.52□□□□□ -2.49
snR38snR38 VIP1Q06685 1146 aaKnown RBP-0.52□□□□□ -2.49
snR38snR38 JID1Q12350 301 aa-0.52□□□□□ -2.49
snR38snR38 NKP1Q12493 238 aa-0.52□□□□□ -2.49
snR38snR38 RMP1Q12530 201 aa-0.52□□□□□ -2.49
snR38snR38 TFS1P14306 219 aa-0.53□□□□□ -2.49
snR38snR38 APE2P32454 952 aaKnown RBP-0.53□□□□□ -2.49
snR38snR38 GLC7P32598 312 aaKnown RBP-0.53□□□□□ -2.49
snR38snR38 SDS22P36047 338 aa-0.53□□□□□ -2.49
snR38snR38 RRT5P43607 289 aa-0.53□□□□□ -2.49
snR38snR38 STR3P53101 465 aaKnown RBP-0.53□□□□□ -2.49
snR38snR38 SPC105P53148 917 aa-0.53□□□□□ -2.49
snR38snR38 POP6P53218 158 aa-0.53□□□□□ -2.49
snR38snR38 CAF130P53280 1122 aaPredicted RBP-0.53□□□□□ -2.49
snR38snR38 MTM1P53320 366 aa-0.53□□□□□ -2.49
snR38snR38 OGG1P53397 376 aaPredicted RBP-0.53□□□□□ -2.49
snR38snR38 YNR029CP53729 429 aaKnown RBP-0.53□□□□□ -2.49
snR38snR38 YOL057WQ08225 711 aa-0.53□□□□□ -2.49
snR38snR38 THP1Q08231 455 aa-0.53□□□□□ -2.49
snR38snR38 ICL2Q12031 575 aa-0.53□□□□□ -2.49
snR38snR38 IZH2Q12442 317 aa-0.53□□□□□ -2.49
snR38snR38 VCX1Q99385 411 aa-0.53□□□□□ -2.49
snR38snR38 TRP1P00912 224 aa-0.54□□□□□ -2.5
snR38snR38 UTR4P32626 227 aa-0.54□□□□□ -2.5
snR38snR38 SRB2P34162 210 aa-0.54□□□□□ -2.5
snR38snR38 TGL1P34163 548 aa-0.54□□□□□ -2.5
snR38snR38 NUP120P35729 1037 aa-0.54□□□□□ -2.5
snR38snR38 RIB5P38145 238 aa-0.54□□□□□ -2.5
snR38snR38 DPH1P40487 425 aaKnown RBP-0.54□□□□□ -2.5
snR38snR38 SWP82P43554 623 aa-0.54□□□□□ -2.5
snR38snR38 SSN8P47821 323 aa-0.54□□□□□ -2.5
snR38snR38 HST4P53688 370 aa-0.54□□□□□ -2.5
snR38snR38 MIX17Q03667 156 aa-0.54□□□□□ -2.5
snR38snR38 BRE1Q07457 700 aaKnown RBP-0.54□□□□□ -2.5
snR38snR38 ZIP1P31111 875 aa-0.55□□□□□ -2.5
snR38snR38 CSE2P33308 149 aa-0.55□□□□□ -2.5
snR38snR38 FRE2P36033 711 aa-0.55□□□□□ -2.5
snR38snR38 SDH4P37298 181 aa-0.55□□□□□ -2.5
snR38snR38 STP2P38704 541 aa-0.55□□□□□ -2.5
snR38snR38 AXL2P38928 823 aa-0.55□□□□□ -2.5
snR38snR38 UIP3P39547 235 aa-0.55□□□□□ -2.5
snR38snR38 GCD10P41814 478 aa-0.55□□□□□ -2.5
snR38snR38 YFR054CP43622 192 aa-0.55□□□□□ -2.5
snR38snR38 YJR154WP47181 346 aa-0.55□□□□□ -2.5
snR38snR38 SLD3P53135 668 aa-0.55□□□□□ -2.5
snR38snR38 ART5P53244 586 aaKnown RBP-0.55□□□□□ -2.5
snR38snR38 GPI1P53306 609 aa-0.55□□□□□ -2.5
snR38snR38 MYO5Q04439 1219 aaKnown RBP-0.55□□□□□ -2.5
snR38snR38 ECM30Q06673 1274 aa-0.55□□□□□ -2.5
snR38snR38 MUM3Q08750 479 aa-0.55□□□□□ -2.5
snR38snR38 SUC2P00724 532 aa-0.56□□□□□ -2.5
snR38snR38 MIS1P09440 975 aaKnown RBP-0.56□□□□□ -2.5
snR38snR38 DAL5P15365 543 aa-0.56□□□□□ -2.5
snR38snR38 SUI2P20459 304 aaKnown RBP-0.56□□□□□ -2.5
snR38snR38 YBR225WP38321 900 aa-0.56□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms