RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C UBA1P22515 1024 aaKnown RBP2.09□□□□□ -2.08
ATG11YPR049C YCR102CP25608 368 aa2.09□□□□□ -2.08
ATG11YPR049C SDS22P36047 338 aa2.09□□□□□ -2.08
ATG11YPR049C YHL041WP38730 149 aa2.09□□□□□ -2.08
ATG11YPR049C TMN3P40071 706 aa2.09□□□□□ -2.08
ATG11YPR049C YNL143CP53908 130 aa2.09□□□□□ -2.08
ATG11YPR049C GFD1Q04839 188 aaKnown RBP2.09□□□□□ -2.08
ATG11YPR049C YDL218WQ07629 317 aa2.09□□□□□ -2.08
ATG11YPR049C TEN1Q07921 160 aa2.09□□□□□ -2.08
ATG11YPR049C SIL1Q08199 421 aa2.09□□□□□ -2.08
ATG11YPR049C IMG1P25626 169 aa2.08□□□□□ -2.08
ATG11YPR049C YMR262WP38430 313 aa2.08□□□□□ -2.08
ATG11YPR049C STL1P39932 569 aa2.08□□□□□ -2.08
ATG11YPR049C AIP1P46680 615 aaKnown RBP2.08□□□□□ -2.08
ATG11YPR049C NBP35P52920 328 aa2.08□□□□□ -2.08
ATG11YPR049C SPG3Q04398 127 aaPredicted RBP2.08□□□□□ -2.08
ATG11YPR049C MDM30Q05930 598 aa2.08□□□□□ -2.08
ATG11YPR049C YPR114WQ06107 315 aa2.08□□□□□ -2.08
ATG11YPR049C LYS21Q12122 440 aaKnown RBP2.08□□□□□ -2.08
ATG11YPR049C UPC2Q12151 913 aa2.08□□□□□ -2.08
ATG11YPR049C YOR342CQ12182 319 aa2.08□□□□□ -2.08
ATG11YPR049C NTO1Q12311 748 aa2.08□□□□□ -2.08
ATG11YPR049C GTT2Q12390 233 aa2.08□□□□□ -2.08
ATG11YPR049C OCA6Q12454 224 aa2.08□□□□□ -2.08
ATG11YPR049C CPA2P03965 1118 aaKnown RBP2.08□□□□□ -2.08
ATG11YPR049C PHO81P17442 1178 aa2.08□□□□□ -2.08
ATG11YPR049C VPS34P22543 875 aa2.08□□□□□ -2.08
ATG11YPR049C YJU2P28320 278 aaPredicted RBP2.08□□□□□ -2.08
ATG11YPR049C SNZ3P43545 298 aa2.08□□□□□ -2.08
ATG11YPR049C SNZ2P53824 298 aa2.08□□□□□ -2.08
ATG11YPR049C ASI2P53895 289 aa2.08□□□□□ -2.08
ATG11YPR049C NGL2Q03264 515 aaKnown RBP2.08□□□□□ -2.08
ATG11YPR049C TSR1Q07381 788 aaKnown RBP2.08□□□□□ -2.08
ATG11YPR049C SLX4Q12098 748 aa2.08□□□□□ -2.08
ATG11YPR049C YRA1Q12159 226 aaKnown RBP2.08□□□□□ -2.08
ATG11YPR049C YER145C-AA0A023PYF4 145 aa2.08□□□□□ -2.08
ATG11YPR049C YJR096WP47137 282 aa2.08□□□□□ -2.08
ATG11YPR049C COG8Q04632 607 aa2.08□□□□□ -2.08
ATG11YPR049C RMD5Q12508 421 aa2.08□□□□□ -2.08
ATG11YPR049C ELM1P32801 640 aa2.07□□□□□ -2.08
ATG11YPR049C AIM18P38884 321 aa2.07□□□□□ -2.08
ATG11YPR049C PMT6P42934 759 aa2.07□□□□□ -2.08
ATG11YPR049C YJL107CP42947 387 aa2.07□□□□□ -2.08
ATG11YPR049C YDR209CQ03480 137 aa2.07□□□□□ -2.08
ATG11YPR049C TUF1P02992 437 aaKnown RBP2.07□□□□□ -2.08
ATG11YPR049C SUI3P09064 285 aaKnown RBP2.07□□□□□ -2.08
ATG11YPR049C COS111P38308 924 aa2.07□□□□□ -2.08
ATG11YPR049C RRP3P38712 501 aaKnown RBP2.07□□□□□ -2.08
ATG11YPR049C YHL037CP38733 133 aa2.07□□□□□ -2.08
ATG11YPR049C SIT1P39980 628 aa2.07□□□□□ -2.08
ATG11YPR049C SIP4P46954 829 aa2.07□□□□□ -2.08
ATG11YPR049C YGL081WP53156 320 aa2.07□□□□□ -2.08
ATG11YPR049C NUP116Q02630 1113 aa2.07□□□□□ -2.08
ATG11YPR049C CIA1Q05583 330 aa2.07□□□□□ -2.08
ATG11YPR049C AKR2Q12013 749 aa2.07□□□□□ -2.08
ATG11YPR049C YOR032W-AQ8TGS1 66 aa2.07□□□□□ -2.08
ATG11YPR049C VPS5Q92331 675 aa2.07□□□□□ -2.08
ATG11YPR049C ERG11P10614 530 aa2.07□□□□□ -2.08
ATG11YPR049C ACO1P19414 778 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
ATG11YPR049C SSH4P32343 579 aa2.07□□□□□ -2.08
ATG11YPR049C AEP1P32493 518 aa2.07□□□□□ -2.08
ATG11YPR049C SPS19P32573 292 aaKnown RBP2.07□□□□□ -2.08
ATG11YPR049C YJR142WP47173 342 aa2.07□□□□□ -2.08
ATG11YPR049C COS5P47187 383 aa2.07□□□□□ -2.08
ATG11YPR049C EMC4P53073 190 aa2.07□□□□□ -2.08
ATG11YPR049C MRS2Q01926 470 aa2.07□□□□□ -2.08
ATG11YPR049C GLO2Q05584 274 aa2.07□□□□□ -2.08
ATG11YPR049C BLS1Q06071 122 aa2.07□□□□□ -2.08
ATG11YPR049C OMS1Q06668 471 aa2.07□□□□□ -2.08
ATG11YPR049C CHS5Q12114 671 aaKnown RBP2.07□□□□□ -2.08
ATG11YPR049C PLC1P32383 869 aa2.06□□□□□ -2.08
ATG11YPR049C RSM22P36056 628 aa2.06□□□□□ -2.08
ATG11YPR049C MAL33P38157 468 aa2.06□□□□□ -2.08
ATG11YPR049C VHC1P38329 1120 aa2.06□□□□□ -2.08
ATG11YPR049C SAP1P39955 897 aaKnown RBP2.06□□□□□ -2.08
ATG11YPR049C YIL067CP40514 678 aa2.06□□□□□ -2.08
ATG11YPR049C TCB2P48231 1178 aa2.06□□□□□ -2.08
ATG11YPR049C IGO1P53897 168 aa2.06□□□□□ -2.08
ATG11YPR049C KTR6P54070 446 aa2.06□□□□□ -2.08
ATG11YPR049C MOT3P54785 490 aaKnown RBP2.06□□□□□ -2.08
ATG11YPR049C ASM4Q05166 528 aa2.06□□□□□ -2.08
ATG11YPR049C ADY3Q07732 790 aa2.06□□□□□ -2.08
ATG11YPR049C ARP7Q12406 477 aa2.06□□□□□ -2.08
ATG11YPR049C Q0297Q9ZZV8 51 aa2.06□□□□□ -2.08
ATG11YPR049C FLO9P39712 1322 aa2.06□□□□□ -2.08
ATG11YPR049C RDS1P25611 832 aa2.06□□□□□ -2.08
ATG11YPR049C XRS2P33301 854 aa2.06□□□□□ -2.08
ATG11YPR049C SRB2P34162 210 aa2.06□□□□□ -2.08
ATG11YPR049C CKB2P38930 258 aa2.06□□□□□ -2.08
ATG11YPR049C TRM9P49957 279 aa2.06□□□□□ -2.08
ATG11YPR049C SLD3P53135 668 aa2.06□□□□□ -2.08
ATG11YPR049C ATP25Q03153 612 aa2.06□□□□□ -2.08
ATG11YPR049C YMR178WQ03219 274 aaKnown RBP2.06□□□□□ -2.08
ATG11YPR049C RNH1Q04740 348 aa2.06□□□□□ -2.08
ATG11YPR049C ATG33Q06485 197 aa2.06□□□□□ -2.08
ATG11YPR049C TGS1Q12052 315 aa2.06□□□□□ -2.08
ATG11YPR049C YKL033W-AQ86ZR7 236 aa2.06□□□□□ -2.08
ATG11YPR049C CDC39P25655 2108 aaKnown RBP2.06□□□□□ -2.08
ATG11YPR049C SCH9P11792 824 aaKnown RBP2.05□□□□□ -2.08
ATG11YPR049C MSP1P28737 362 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms