RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W ATR1P13090 542 aa2.18□□□□□ -2.06
SEC16YPL085W PRP6P19735 899 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W ARG1P22768 420 aa2.18□□□□□ -2.06
SEC16YPL085W GID7P25569 745 aa2.18□□□□□ -2.06
SEC16YPL085W AAR2P32357 355 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W AEP1P32493 518 aa2.18□□□□□ -2.06
SEC16YPL085W MRP4P32902 394 aa2.18□□□□□ -2.06
SEC16YPL085W ARN2P38724 620 aa2.18□□□□□ -2.06
SEC16YPL085W ALG5P40350 334 aa2.18□□□□□ -2.06
SEC16YPL085W ORM1P53224 222 aa2.18□□□□□ -2.06
SEC16YPL085W SEC10Q06245 871 aa2.18□□□□□ -2.06
SEC16YPL085W YDL114WQ07530 308 aa2.18□□□□□ -2.06
SEC16YPL085W DDC1Q08949 612 aa2.18□□□□□ -2.06
SEC16YPL085W CBP6P07253 162 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W SRP101P32916 621 aa2.18□□□□□ -2.06
SEC16YPL085W RPT5P33297 434 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W ECM31P38122 312 aa2.18□□□□□ -2.06
SEC16YPL085W PPS1P38148 807 aa2.18□□□□□ -2.06
SEC16YPL085W STS1P38637 319 aa2.18□□□□□ -2.06
SEC16YPL085W GCV1P48015 400 aa2.18□□□□□ -2.06
SEC16YPL085W PYK2P52489 506 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W NMA111P53920 997 aa2.18□□□□□ -2.06
SEC16YPL085W YNL095CP53932 642 aa2.18□□□□□ -2.06
SEC16YPL085W NAM8Q00539 523 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W RPN4Q03465 531 aa2.18□□□□□ -2.06
SEC16YPL085W GPI17Q04080 534 aa2.18□□□□□ -2.06
SEC16YPL085W SWA2Q06677 668 aa2.18□□□□□ -2.06
SEC16YPL085W CHS5Q12114 671 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W PKH2Q12236 1081 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W YOL163WP0CF20 169 aa2.18□□□□□ -2.06
SEC16YPL085W HOM2P13663 365 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W YCR101CP25607 182 aa2.18□□□□□ -2.06
SEC16YPL085W PDB1P32473 366 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W PRP21P32524 280 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W SFC1P33303 322 aa2.18□□□□□ -2.06
SEC16YPL085W DOA1P36037 715 aa2.18□□□□□ -2.06
SEC16YPL085W YPC1P38298 316 aa2.18□□□□□ -2.06
SEC16YPL085W RCK1P38622 512 aa2.18□□□□□ -2.06
SEC16YPL085W NUP85P46673 744 aa2.18□□□□□ -2.06
SEC16YPL085W GET1P53192 235 aa2.18□□□□□ -2.06
SEC16YPL085W ARK1P53974 638 aa2.18□□□□□ -2.06
SEC16YPL085W RPL6AQ02326 176 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W UME1Q03010 460 aa2.18□□□□□ -2.06
SEC16YPL085W ASR1Q06834 288 aa2.18□□□□□ -2.06
SEC16YPL085W MUM3Q08750 479 aa2.18□□□□□ -2.06
SEC16YPL085W SPO24Q3E752 67 aa2.18□□□□□ -2.06
SEC16YPL085W ILV2P07342 687 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W YAK1P14680 807 aa2.18□□□□□ -2.06
SEC16YPL085W SCL1P21243 252 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W RAM2P29703 316 aa2.18□□□□□ -2.06
SEC16YPL085W STE13P33894 931 aa2.18□□□□□ -2.06
SEC16YPL085W SEC31P38968 1273 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W SWD1P39706 426 aa2.18□□□□□ -2.06
SEC16YPL085W ULP2P40537 1034 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W ROK1P45818 564 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W TAM41P53230 385 aa2.18□□□□□ -2.06
SEC16YPL085W ASI3P53983 676 aa2.18□□□□□ -2.06
SEC16YPL085W YMR160WQ03823 816 aa2.18□□□□□ -2.06
SEC16YPL085W RKM2Q03942 479 aa2.18□□□□□ -2.06
SEC16YPL085W CIA1Q05583 330 aa2.18□□□□□ -2.06
SEC16YPL085W NEJ1Q06148 342 aa2.18□□□□□ -2.06
SEC16YPL085W ATG31Q12421 196 aa2.18□□□□□ -2.06
SEC16YPL085W TAO3P40468 2376 aa2.18□□□□□ -2.06
SEC16YPL085W SCEIP03882 235 aa2.18□□□□□ -2.06
SEC16YPL085W RAP1P11938 827 aa2.18□□□□□ -2.06
SEC16YPL085W TUP1P16649 713 aa2.18□□□□□ -2.06
SEC16YPL085W PHO80P20052 293 aa2.18□□□□□ -2.06
SEC16YPL085W ESS1P22696 170 aa2.18□□□□□ -2.06
SEC16YPL085W ATP3P38077 311 aaKnown RBP2.18□□□□□ -2.06
SEC16YPL085W CCZ1P38273 704 aa2.18□□□□□ -2.06
SEC16YPL085W SMF1P38925 575 aa2.18□□□□□ -2.06
SEC16YPL085W TMA22P47089 198 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W SMA1Q02651 245 aa2.18□□□□□ -2.06
SEC16YPL085W YDR248CQ03786 193 aa2.18□□□□□ -2.06
SEC16YPL085W MCM21Q06675 368 aa2.18□□□□□ -2.06
SEC16YPL085W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SEC16YPL085W FMP40Q08968 688 aaPredicted RBP2.18□□□□□ -2.06
SEC16YPL085W MSH5Q12175 901 aa2.18□□□□□ -2.06
SEC16YPL085W SWI5P08153 709 aa2.17□□□□□ -2.06
SEC16YPL085W CLB2P24869 491 aa2.17□□□□□ -2.06
SEC16YPL085W PTP1P25044 335 aa2.17□□□□□ -2.06
SEC16YPL085W PGS1P25578 521 aa2.17□□□□□ -2.06
SEC16YPL085W SYP1P25623 870 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W KAR9P32526 644 aa2.17□□□□□ -2.06
SEC16YPL085W TRS65P32893 560 aa2.17□□□□□ -2.06
SEC16YPL085W ASC1P38011 319 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W REG2P38232 338 aa2.17□□□□□ -2.06
SEC16YPL085W TSL1P38427 1098 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W RIM11P38615 370 aa2.17□□□□□ -2.06
SEC16YPL085W YER186CP40101 306 aa2.17□□□□□ -2.06
SEC16YPL085W CIN1P40987 1014 aa2.17□□□□□ -2.06
SEC16YPL085W YGR210CP42942 411 aa2.17□□□□□ -2.06
SEC16YPL085W PRP24P49960 444 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W COS6P53344 381 aa2.17□□□□□ -2.06
SEC16YPL085W NOG2P53742 486 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W COS1P53822 381 aa2.17□□□□□ -2.06
SEC16YPL085W EFR3Q03653 782 aaKnown RBP2.17□□□□□ -2.06
SEC16YPL085W AIM36Q03798 255 aa2.17□□□□□ -2.06
SEC16YPL085W CSN9Q03981 162 aa2.17□□□□□ -2.06
SEC16YPL085W PEX12Q04370 399 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms