RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C SSE2P32590 693 aaKnown RBP5.38□□□□□ -1.55
NUP1YOR098C PHO11P35842 467 aa5.38□□□□□ -1.55
NUP1YOR098C GLY1P37303 387 aaKnown RBP5.38□□□□□ -1.55
NUP1YOR098C PHO12P38693 467 aa5.38□□□□□ -1.55
NUP1YOR098C GCD14P46959 383 aaPredicted RBP5.38□□□□□ -1.55
NUP1YOR098C MPP6P53725 186 aaPredicted RBP5.38□□□□□ -1.55
NUP1YOR098C YFH1Q07540 174 aa5.38□□□□□ -1.55
NUP1YOR098C VPS3P23643 1011 aa5.38□□□□□ -1.55
NUP1YOR098C CEM1P39525 442 aa5.38□□□□□ -1.55
NUP1YOR098C YIL077CP40508 320 aa5.38□□□□□ -1.55
NUP1YOR098C YJL107CP42947 387 aa5.38□□□□□ -1.55
NUP1YOR098C SEG1Q04279 960 aa5.38□□□□□ -1.55
NUP1YOR098C CSI1Q04368 295 aa5.38□□□□□ -1.55
NUP1YOR098C TLG2Q08144 397 aa5.38□□□□□ -1.55
NUP1YOR098C YKL068W-AQ3E826 78 aa5.38□□□□□ -1.55
NUP1YOR098C BCK1Q01389 1478 aa5.38□□□□□ -1.55
NUP1YOR098C STE2D6VTK4 431 aa5.38□□□□□ -1.55
NUP1YOR098C KGD1P20967 1014 aaKnown RBP5.38□□□□□ -1.55
NUP1YOR098C SEC15P22224 910 aa5.38□□□□□ -1.55
NUP1YOR098C SWP82P43554 623 aa5.38□□□□□ -1.55
NUP1YOR098C TEX1P53851 422 aaKnown RBP5.38□□□□□ -1.55
NUP1YOR098C RSM28Q03430 361 aa5.38□□□□□ -1.55
NUP1YOR098C ARR1Q06596 294 aa5.38□□□□□ -1.55
NUP1YOR098C YFT2Q06676 274 aa5.38□□□□□ -1.55
NUP1YOR098C BUG1Q12191 341 aa5.38□□□□□ -1.55
NUP1YOR098C NDJ1Q12366 352 aa5.38□□□□□ -1.55
NUP1YOR098C LYS2P07702 1392 aa5.37□□□□□ -1.55
NUP1YOR098C AUS1Q08409 1394 aa5.37□□□□□ -1.55
NUP1YOR098C ILV2P07342 687 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C SCH9P11792 824 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C CLN1P20437 546 aa5.37□□□□□ -1.55
NUP1YOR098C VMA16P23968 213 aa5.37□□□□□ -1.55
NUP1YOR098C UGP1P32861 499 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C PXL1P36166 706 aa5.37□□□□□ -1.55
NUP1YOR098C YBR139WP38109 508 aa5.37□□□□□ -1.55
NUP1YOR098C MSG5P38590 489 aa5.37□□□□□ -1.55
NUP1YOR098C MND2P40577 368 aa5.37□□□□□ -1.55
NUP1YOR098C HYR1P40581 163 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C GCN20P43535 752 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C RPA34P47006 233 aaPredicted RBP5.37□□□□□ -1.55
NUP1YOR098C NET1P47035 1189 aa5.37□□□□□ -1.55
NUP1YOR098C SCW11P53189 542 aa5.37□□□□□ -1.55
NUP1YOR098C PRM1P53835 661 aa5.37□□□□□ -1.55
NUP1YOR098C MRS2Q01926 470 aa5.37□□□□□ -1.55
NUP1YOR098C SKO1Q02100 647 aa5.37□□□□□ -1.55
NUP1YOR098C FIN1Q03898 291 aa5.37□□□□□ -1.55
NUP1YOR098C ILV5P06168 395 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C FRS2P15625 503 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C PRE10P21242 288 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
NUP1YOR098C VPS34P22543 875 aa5.37□□□□□ -1.55
NUP1YOR098C EMC1P25574 760 aa5.37□□□□□ -1.55
NUP1YOR098C RPC37P36121 282 aa5.37□□□□□ -1.55
NUP1YOR098C ATP3P38077 311 aaKnown RBP5.37□□□□□ -1.55
NUP1YOR098C ULP2P40537 1034 aaPredicted RBP5.37□□□□□ -1.55
NUP1YOR098C YGR079WP53249 370 aa5.37□□□□□ -1.55
NUP1YOR098C SMA2Q04658 369 aa5.37□□□□□ -1.55
NUP1YOR098C BOP2Q06150 570 aa5.37□□□□□ -1.55
NUP1YOR098C ECM7Q06200 448 aa5.37□□□□□ -1.55
NUP1YOR098C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
NUP1YOR098C AEP3Q12089 606 aa5.37□□□□□ -1.55
NUP1YOR098C MF(ALPHA)1P01149 165 aa5.36□□□□□ -1.55
NUP1YOR098C NDI1P32340 513 aa5.36□□□□□ -1.55
NUP1YOR098C BZZ1P38822 633 aa5.36□□□□□ -1.55
NUP1YOR098C RTT107P38850 1070 aa5.36□□□□□ -1.55
NUP1YOR098C HOP2P53187 214 aa5.36□□□□□ -1.55
NUP1YOR098C ATG23Q06671 453 aa5.36□□□□□ -1.55
NUP1YOR098C DIB1Q06819 143 aaPredicted RBP5.36□□□□□ -1.55
NUP1YOR098C TAF3Q12297 353 aa5.36□□□□□ -1.55
NUP1YOR098C YIM1P28625 365 aa5.36□□□□□ -1.55
NUP1YOR098C ARO9P38840 513 aaPredicted RBP5.36□□□□□ -1.55
NUP1YOR098C FKH2P41813 862 aa5.36□□□□□ -1.55
NUP1YOR098C LOC1P43586 204 aaPredicted RBP5.36□□□□□ -1.55
NUP1YOR098C STB2P46679 850 aa5.36□□□□□ -1.55
NUP1YOR098C ADE13Q05911 482 aaKnown RBP5.36□□□□□ -1.55
NUP1YOR098C CRN1Q06440 651 aa5.36□□□□□ -1.55
NUP1YOR098C FEN2P25621 512 aaKnown RBP5.36□□□□□ -1.55
NUP1YOR098C YKL070WP36087 169 aa5.36□□□□□ -1.55
NUP1YOR098C BUR6P40096 142 aa5.36□□□□□ -1.55
NUP1YOR098C YAT1P80235 687 aa5.36□□□□□ -1.55
NUP1YOR098C RSM24Q03976 319 aa5.36□□□□□ -1.55
NUP1YOR098C STE23Q06010 1027 aa5.36□□□□□ -1.55
NUP1YOR098C YLR346CQ06139 101 aa5.36□□□□□ -1.55
NUP1YOR098C CDC37P06101 506 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C PEX1P24004 1043 aa5.35□□□□□ -1.55
NUP1YOR098C KEL1P38853 1164 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C YGL185CP53100 379 aa5.35□□□□□ -1.55
NUP1YOR098C MNT4P53745 580 aa5.35□□□□□ -1.55
NUP1YOR098C RRP45Q05636 305 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C SWM1Q12379 170 aa5.35□□□□□ -1.55
NUP1YOR098C SRP54P20424 541 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C YSP3P25036 478 aa5.35□□□□□ -1.55
NUP1YOR098C RDS1P25611 832 aa5.35□□□□□ -1.55
NUP1YOR098C CDC15P27636 974 aa5.35□□□□□ -1.55
NUP1YOR098C ZTA1P38230 334 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C SCC4P40090 624 aa5.35□□□□□ -1.55
NUP1YOR098C AIM20P40451 204 aa5.35□□□□□ -1.55
NUP1YOR098C URM1P40554 99 aaPredicted RBP5.35□□□□□ -1.55
NUP1YOR098C MCM6P53091 1017 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C MPS2P53159 387 aa5.35□□□□□ -1.55
NUP1YOR098C MTL1P53214 551 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms