RNA–Protein interactions for RNA: YOR055W

YOR055W, Transcript of Dubious open reading frame, yeast

Gene YOR055W, Length 435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR055W	YOR055W	DTD1	Q07648	150 aa	Known RBP	2.43	□□□□□ -2.02
YOR055W	YOR055W	HBT1	Q07653	1046 aa	Known RBP	2.43	□□□□□ -2.02
YOR055W	YOR055W	LOT6	Q07923	191 aa		2.43	□□□□□ -2.02
YOR055W	YOR055W	MLH3	Q12083	715 aa		2.43	□□□□□ -2.02
YOR055W	YOR055W	PER33	Q12144	273 aa		2.43	□□□□□ -2.02
YOR055W	YOR055W	FAS1	P07149	2051 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	LEU4	P06208	619 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	MSF1	P08425	469 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	YAR066W	P0CX18	203 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	YHR214W	P0CX19	203 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RPS4A	P0CX35	261 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	RPS4B	P0CX36	261 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	RAP1	P11938	827 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	MRP13	P12686	339 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	REV1	P12689	985 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	CBS2	P14905	389 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	APA1	P16550	321 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	CMK2	P22517	447 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	SGV1	P23293	657 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	DPB2	P24482	689 aa	Predicted RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	MNE1	P24720	663 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	ERG6	P25087	383 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	DMC1	P25453	334 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	URK1	P27515	501 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	UBC8	P28263	218 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	SYN8	P31377	255 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	NTG1	P31378	399 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	SPS19	P32573	292 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	TFB1	P32776	642 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	COX13	P32799	129 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	TIP20	P33891	701 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RMA1	P36001	430 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	YKR015C	P36111	568 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	YBR138C	P38277	524 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	PCL5	P38794	229 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	DUN1	P39009	513 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RBG1	P39729	369 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RPH1	P39956	796 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	HEM14	P40012	539 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	JHD1	P40034	492 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	EMP65	P40085	556 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	MMF1	P40185	145 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	AYR1	P40471	297 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	IRR1	P40541	1150 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	GAB1	P41733	394 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	IME4	P41833	600 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	MEP2	P41948	499 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	REF2	P42073	533 aa	Predicted RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	GCN20	P43535	752 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	YJR124C	P47159	448 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	GTO1	P48239	356 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	MTR3	P48240	250 aa	Predicted RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	PSP1	P50896	841 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	VEL1	P53058	206 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	MNT2	P53059	558 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	MON1	P53129	644 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	SPC105	P53148	917 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	ARE2	P53629	642 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	HST3	P53687	447 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	CAF120	P53836	1060 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	DSL1	P53847	754 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	YNL095C	P53932	642 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	TMA20	P89886	181 aa	Predicted RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	SED5	Q01590	340 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	AAT1	Q01802	451 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	SVL3	Q03088	825 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	MMT1	Q03218	510 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	EFR3	Q03653	782 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	YMR010W	Q03687	405 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	ECM11	Q04110	302 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	SEG1	Q04279	960 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	PEX12	Q04370	399 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	YMR226C	Q05016	267 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	BSC2	Q05611	235 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RSA3	Q05942	220 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	YLR257W	Q06146	321 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	GPI11	Q06636	219 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RSC3	Q06639	885 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RSB1	Q08417	382 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	MNL2	Q12205	849 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	WTM1	Q12363	437 aa	Known RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	PFK27	Q12471	397 aa	Predicted RBP	2.42	□□□□□ -2.02
YOR055W	YOR055W	SNF8	Q12483	233 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	YOL159C-A	Q3E769	90 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	YOR338W	Q99326	363 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	FRT1	Q99332	602 aa		2.42	□□□□□ -2.02
YOR055W	YOR055W	RPS9A	O13516	197 aa	Known RBP	2.41	□□□□□ -2.02
YOR055W	YOR055W	THP2	O13539	261 aa	Known RBP	2.41	□□□□□ -2.02
YOR055W	YOR055W	TIM9	O74700	87 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	STE3	P06783	470 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	FUM1	P08417	488 aa	Known RBP	2.41	□□□□□ -2.02
YOR055W	YOR055W	KAR1	P11927	433 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	IDI1	P15496	288 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	MET8	P15807	274 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	DAP2	P18962	818 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	PRI2	P20457	528 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	UBA1	P22515	1024 aa	Known RBP	2.41	□□□□□ -2.02
YOR055W	YOR055W	PEX34	P25584	144 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	RSC6	P25632	483 aa		2.41	□□□□□ -2.02
YOR055W	YOR055W	PEX3	P28795	441 aa		2.41	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms