RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	NPA3	P47122	385 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	COG1	P53079	417 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	HOS2	P53096	452 aa	Predicted RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	YGL138C	P53122	345 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	YGR079W	P53249	370 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	DCP2	P53550	970 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	EAF7	P53911	425 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-DR2	Q03483	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	RTT103	Q05543	409 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	PIG1	Q06216	648 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	YLH47	Q06493	454 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	DAP1	Q12091	152 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-B	Q12260	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-OR2	Q12293	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-DR1	Q12392	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-OR1	Q12439	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	ERG27	Q12452	347 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	PCD1	Q12524	340 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	SMC6	Q12749	1114 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-DR3	Q99303	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	YML003W	P0CF16	290 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	CLN3	P13365	580 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	CKA2	P19454	339 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	DPH2	P32461	534 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	SWE1	P32944	819 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	GEX2	P36173	615 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	YND1	P40009	630 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	CSM2	P40465	213 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	UBP8	P50102	471 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	YGL039W	P53183	348 aa	Known RBP	3.1	□□□□□ -1.91
ATG3	YNR007C	CAC2	Q04199	468 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	RCO1	Q04779	684 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	FMP42	Q04991	504 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	HCR1	Q05775	265 aa	Known RBP	3.1	□□□□□ -1.91
ATG3	YNR007C	YLR455W	Q06188	304 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	SMD2	Q06217	110 aa	Known RBP	3.1	□□□□□ -1.91
ATG3	YNR007C	MCH4	Q08268	501 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	TRM8	Q12009	286 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	NUS1	Q12063	375 aa		3.1	□□□□□ -1.91
ATG3	YNR007C	YLR302C	O13544	120 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	ILV1	P00927	576 aa	Known RBP	3.09	□□□□□ -1.91
ATG3	YNR007C	FRS2	P15625	503 aa	Known RBP	3.09	□□□□□ -1.91
ATG3	YNR007C	CDC15	P27636	974 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	COT1	P32798	439 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	CSE1	P33307	960 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	DRE2	P36152	348 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	MNN2	P38069	597 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	UBP13	P38187	747 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	ASG1	P40467	964 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	FIS1	P40515	155 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	LAM5	P43560	674 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	MSY1	P48527	492 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	SVL3	Q03088	825 aa	Known RBP	3.09	□□□□□ -1.91
ATG3	YNR007C	FUS2	Q05670	677 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	ECI1	Q05871	280 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	POS5	Q06892	414 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	YMR230W-A	Q3E7B5	62 aa		3.09	□□□□□ -1.91
ATG3	YNR007C	MYO1	P08964	1928 aa		3.09	□□□□□ -1.92
ATG3	YNR007C	COX1	P00401	534 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	ATP1	P07251	545 aa	Known RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	FUM1	P08417	488 aa	Known RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	RPB2	P08518	1224 aa	Known RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	GUK1	P15454	187 aa	Known RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	MCM10	P32354	571 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	SRB5	P32585	307 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	KDX1	P36005	433 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	MRX3	P38172	270 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	SLX1	P38324	304 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	YHL026C	P38740	315 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	BZZ1	P38822	633 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	AXL2	P38928	823 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	FMP10	P40098	244 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	MOB1	P40484	314 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	GPD2	P41911	440 aa	Known RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	MEP3	P53390	489 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	NCS2	P53923	493 aa	Predicted RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	IZH1	Q03419	316 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	EMI2	Q04409	500 aa	Known RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	YDR109C	Q04585	715 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	SWF1	Q04629	336 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	ECM7	Q06200	448 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	CUR1	Q06469	252 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	SUE1	Q06524	206 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	DNL4	Q08387	944 aa	Predicted RBP	3.08	□□□□□ -1.92
ATG3	YNR007C	TMA16	Q08687	178 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	YLR112W	Q12130	139 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	VCX1	Q99385	411 aa		3.08	□□□□□ -1.92
ATG3	YNR007C	FOB1	O13329	566 aa		3.07	□□□□□ -1.92
ATG3	YNR007C	RPL22A	P05749	121 aa	Known RBP	3.07	□□□□□ -1.92
ATG3	YNR007C	HAP2	P06774	265 aa		3.07	□□□□□ -1.92
ATG3	YNR007C	RPL19A	P0CX82	189 aa	Known RBP	3.07	□□□□□ -1.92
ATG3	YNR007C	RPL19B	P0CX83	189 aa	Predicted RBP	3.07	□□□□□ -1.92
ATG3	YNR007C	ALG1	P16661	449 aa		3.07	□□□□□ -1.92
ATG3	YNR007C	RFA2	P26754	273 aa	Known RBP	3.07	□□□□□ -1.92
ATG3	YNR007C	SHE3	P38272	425 aa	Known RBP	3.07	□□□□□ -1.92
ATG3	YNR007C	TVP23	P38962	199 aa		3.07	□□□□□ -1.92
ATG3	YNR007C	PFK26	P40433	827 aa	Known RBP	3.07	□□□□□ -1.92
ATG3	YNR007C	VTC2	P43585	828 aa		3.07	□□□□□ -1.92
ATG3	YNR007C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
ATG3	YNR007C	ARC1	P46672	376 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms