RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	AFG1	P32317	509 aa		3.22	□□□□□ -1.89
PEX6	YNL329C	STB2	P46679	850 aa		3.22	□□□□□ -1.89
PEX6	YNL329C	CUL3	P53202	744 aa		3.22	□□□□□ -1.89
PEX6	YNL329C	COQ9	Q05779	260 aa		3.22	□□□□□ -1.89
PEX6	YNL329C	CFT2	Q12102	859 aa	Predicted RBP	3.22	□□□□□ -1.89
PEX6	YNL329C	SUT2	Q12286	268 aa		3.22	□□□□□ -1.89
PEX6	YNL329C	SEC39	Q12745	709 aa		3.22	□□□□□ -1.89
PEX6	YNL329C	GDB1	Q06625	1536 aa		3.21	□□□□□ -1.89
PEX6	YNL329C	PEX2	P32800	271 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	PAC2	P39937	518 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	MRK1	P50873	501 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	EAF7	P53911	425 aa	Known RBP	3.21	□□□□□ -1.9
PEX6	YNL329C	RQC1	Q05468	723 aa	Known RBP	3.21	□□□□□ -1.9
PEX6	YNL329C	VTA1	Q06263	330 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	FRE3	Q08905	711 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	CHC1	P22137	1653 aa	Known RBP	3.21	□□□□□ -1.9
PEX6	YNL329C	QCR6	P00127	147 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	ADY2	P25613	283 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	RPS0A	P32905	252 aa	Known RBP	3.21	□□□□□ -1.9
PEX6	YNL329C	NUP133	P36161	1157 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	IRC7	P43623	340 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	YNL234W	P53857	426 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	BSP1	Q06604	576 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	SNF3	P10870	884 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	HXT3	P32466	567 aa	Known RBP	3.21	□□□□□ -1.9
PEX6	YNL329C	OCT1	P35999	772 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	HOT13	P36078	116 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	SNG1	P46950	547 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	YGL138C	P53122	345 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	SMM1	P53720	384 aa	Known RBP	3.21	□□□□□ -1.9
PEX6	YNL329C	FIN1	Q03898	291 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	YPL272C	Q08984	517 aa		3.21	□□□□□ -1.9
PEX6	YNL329C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
PEX6	YNL329C	RAV1	P47104	1357 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	RPL31B	P0C2H9	113 aa	Known RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	CLC1	P17891	233 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	GSY2	P27472	705 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	NTC20	P38302	140 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	SEC28	P40509	296 aa	Known RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	EFM4	P40516	257 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	BTN2	P53286	410 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	RPA49	Q01080	415 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	TOF2	Q02208	771 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	RPS10A	Q08745	105 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	YDL007C-A	Q2V2Q0	85 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	APE1	P14904	514 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	PRD1	P25375	712 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	CAK1	P43568	368 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	VPS25	P47142	202 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	KAP120	Q02932	1032 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	HEL2	Q05580	639 aa	Known RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	RBS1	Q05672	457 aa	Known RBP	3.2	□□□□□ -1.9
PEX6	YNL329C	MCP2	Q06567	569 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	YDL218W	Q07629	317 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	DCI1	Q08558	271 aa		3.2	□□□□□ -1.9
PEX6	YNL329C	COR1	P07256	457 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	YHR054C	P38780	354 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	FLO5	P38894	1075 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	YGR149W	P48236	432 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	PEX25	Q02969	394 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	IRC3	Q06683	689 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	THP1	Q08231	455 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	RRI1	Q12468	440 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	MMS1	Q06211	1407 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	HSP82	P02829	709 aa	Known RBP	3.19	□□□□□ -1.9
PEX6	YNL329C	KRS1	P15180	591 aa	Known RBP	3.19	□□□□□ -1.9
PEX6	YNL329C	MAK32	P23060	363 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	MGM1	P32266	881 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	YME2	P32843	850 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	ARN1	P38731	627 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	POP1	P41812	875 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	YGR111W	P53265	400 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	ATG26	Q06321	1198 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	EDE1	P34216	1381 aa		3.19	□□□□□ -1.9
PEX6	YNL329C	HOM2	P13663	365 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	ARA1	P38115	344 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	RIX1	P38883	763 aa	Predicted RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	YIL060W	P40519	144 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	YJL107C	P42947	387 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	RRP45	Q05636	305 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	SPB1	P25582	841 aa	Predicted RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	URA7	P28274	579 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	IME2	P32581	645 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	CDC1	P40986	491 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	RPN11	P43588	306 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	RPS10B	P46784	105 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	NET1	P47035	1189 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	SHR3	Q02774	210 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	FRE6	Q12473	712 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	SPO14	P36126	1683 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	URA4	P20051	364 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	YIM1	P28625	365 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	RRT2	P38332	387 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	TCB2	P48231	1178 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	BPL1	P48445	690 aa	Predicted RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	APT1	P49435	187 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	ADE13	Q05911	482 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	SPE3	Q12074	293 aa	Known RBP	3.18	□□□□□ -1.9
PEX6	YNL329C	MHP1	P43638	1398 aa		3.18	□□□□□ -1.9
PEX6	YNL329C	COQ3	P27680	312 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms