RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	YIL086C	P40503	102 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	PHB1	P40961	287 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	YFR020W	P43600	232 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	RCO1	Q04779	684 aa		5.66	□□□□□ -1.5
CSL4	YNL232W	CDC39	P25655	2108 aa	Known RBP	5.66	□□□□□ -1.5
CSL4	YNL232W	MSP1	P28737	362 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	MRPL15	P36523	253 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	PSY4	P38193	441 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	TRM7	P38238	310 aa	Known RBP	5.65	□□□□□ -1.5
CSL4	YNL232W	SEC24	P40482	926 aa	Known RBP	5.65	□□□□□ -1.5
CSL4	YNL232W	YJL107C	P42947	387 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	ESF2	P53743	316 aa	Known RBP	5.65	□□□□□ -1.5
CSL4	YNL232W	CTK1	Q03957	528 aa	Known RBP	5.65	□□□□□ -1.5
CSL4	YNL232W	IVY1	Q04934	453 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	YDR338C	Q05497	695 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	MDM30	Q05930	598 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	AAD15	Q08361	143 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	TMA16	Q08687	178 aa		5.65	□□□□□ -1.5
CSL4	YNL232W	MDM35	O60200	86 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	YPT1	P01123	206 aa	Known RBP	5.64	□□□□□ -1.51
CSL4	YNL232W	YSP3	P25036	478 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	ERG4	P25340	473 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	JNM1	P36224	373 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	YAT2	P40017	923 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	SER3	P40054	469 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	RGI2	P40188	164 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	ZRG17	P53735	605 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	NUP100	Q02629	959 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	CCE1	Q03702	353 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	YET2	Q04210	160 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	YLR001C	Q07895	862 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	RAX1	Q08760	435 aa		5.64	□□□□□ -1.51
CSL4	YNL232W	GFA1	P14742	717 aa	Known RBP	5.63	□□□□□ -1.51
CSL4	YNL232W	ATG15	P25641	520 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	RPC82	P32349	654 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	STE14	P32584	239 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	PPG1	P32838	368 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	PRP18	P33411	251 aa	Predicted RBP	5.63	□□□□□ -1.51
CSL4	YNL232W	CTF13	P35203	478 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	GND1	P38720	489 aa	Known RBP	5.63	□□□□□ -1.51
CSL4	YNL232W	GPI16	P38875	610 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	GAT1	P43574	510 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	RPC17	P47076	161 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	SLU7	Q02775	382 aa	Known RBP	5.63	□□□□□ -1.51
CSL4	YNL232W	GAD1	Q04792	585 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	YPR196W	Q06595	470 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	YDL218W	Q07629	317 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	YOL107W	Q12239	342 aa		5.63	□□□□□ -1.51
CSL4	YNL232W	HSH49	Q99181	213 aa	Predicted RBP	5.63	□□□□□ -1.51
CSL4	YNL232W	HOM3	P10869	527 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	FUR1	P18562	216 aa	Known RBP	5.62	□□□□□ -1.51
CSL4	YNL232W	PRP2	P20095	876 aa	Predicted RBP	5.62	□□□□□ -1.51
CSL4	YNL232W	RPA135	P22138	1203 aa	Known RBP	5.62	□□□□□ -1.51
CSL4	YNL232W	NAM9	P27929	486 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	IMP3	P32899	183 aa	Predicted RBP	5.62	□□□□□ -1.51
CSL4	YNL232W	FLC2	P39719	783 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	MAD1	P40957	749 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	HSV2	P50079	448 aa	Predicted RBP	5.62	□□□□□ -1.51
CSL4	YNL232W	NOG2	P53742	486 aa	Known RBP	5.62	□□□□□ -1.51
CSL4	YNL232W	FDC1	Q03034	503 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	THI7	Q05998	598 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	TEN1	Q07921	160 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	NRT1	Q08485	598 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	YOR097C	Q12274	175 aa	Predicted RBP	5.62	□□□□□ -1.51
CSL4	YNL232W	TRM13	Q12383	476 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	LAG2	Q92325	660 aa		5.62	□□□□□ -1.51
CSL4	YNL232W	TRP4	P07285	380 aa	Predicted RBP	5.61	□□□□□ -1.51
CSL4	YNL232W	FUM1	P08417	488 aa	Known RBP	5.61	□□□□□ -1.51
CSL4	YNL232W	GAL7	P08431	366 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	SED4	P25365	1065 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	SEC65	P29478	273 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	DHH1	P39517	506 aa	Known RBP	5.61	□□□□□ -1.51
CSL4	YNL232W	GIM4	P40005	111 aa	Known RBP	5.61	□□□□□ -1.51
CSL4	YNL232W	VFA1	P40080	203 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	ALY2	P47029	1046 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	YJL049W	P47048	450 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	RAI1	P53063	387 aa	Known RBP	5.61	□□□□□ -1.51
CSL4	YNL232W	FHN1	P53279	174 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	MET14	Q02196	202 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	UME1	Q03010	460 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	MCH5	Q08777	521 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	LEU9	Q12166	604 aa	Known RBP	5.61	□□□□□ -1.51
CSL4	YNL232W	NKP1	Q12493	238 aa		5.61	□□□□□ -1.51
CSL4	YNL232W	COX1	P00401	534 aa		5.6	□□□□□ -1.51
CSL4	YNL232W	SSA3	P09435	649 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	AGP1	P25376	633 aa		5.6	□□□□□ -1.51
CSL4	YNL232W	SBA1	P28707	216 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	MEI5	P32489	222 aa		5.6	□□□□□ -1.51
CSL4	YNL232W	RAD5	P32849	1169 aa	Predicted RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	YRO2	P38079	344 aa		5.6	□□□□□ -1.51
CSL4	YNL232W	LDB7	P38210	180 aa		5.6	□□□□□ -1.51
CSL4	YNL232W	TSL1	P38427	1098 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	BEM4	P39011	633 aa		5.6	□□□□□ -1.51
CSL4	YNL232W	IME4	P41833	600 aa		5.6	□□□□□ -1.51
CSL4	YNL232W	VPS73	P53142	486 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	RLI1	Q03195	608 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	ETT1	Q08421	412 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	YRA1	Q12159	226 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	PRS5	Q12265	496 aa	Known RBP	5.6	□□□□□ -1.51
CSL4	YNL232W	SLH1	P53327	1967 aa	Known RBP	5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms