RNA–Protein interactions for RNA: YNL008C

ASI3, Transcript of Subunit of the nuclear inner membrane Asi ubiquitin ligase complex, yeast

Gene ASI3, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASI3	YNL008C	NPL6	P32832	435 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	VPS17	P32913	551 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	DOT5	P40553	215 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	MET28	P40573	187 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	IMD4	P50094	524 aa	Known RBP	3.04	□□□□□ -1.92
ASI3	YNL008C	YGL260W	P53056	76 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	YGR066C	P53242	292 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	BUD32	P53323	261 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	YMR155W	Q03795	547 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	GLO2	Q05584	274 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	THI20	Q08224	551 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	RTN2	Q12443	393 aa		3.04	□□□□□ -1.92
ASI3	YNL008C	PDA1	P16387	420 aa	Known RBP	3.03	□□□□□ -1.92
ASI3	YNL008C	SEC62	P21825	274 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	TCD2	P36101	447 aa	Known RBP	3.03	□□□□□ -1.92
ASI3	YNL008C	BYE1	P36106	594 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	LSM5	P40089	93 aa	Known RBP	3.03	□□□□□ -1.92
ASI3	YNL008C	YTA12	P40341	825 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	GPD2	P41911	440 aa	Known RBP	3.03	□□□□□ -1.92
ASI3	YNL008C	COQ9	Q05779	260 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	VPS38	Q05919	439 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	DAP1	Q12091	152 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	TIP41	Q12199	356 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	PMS1	P14242	873 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	ECM15	P35195	104 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	FMP46	P36141	133 aa	Known RBP	3.03	□□□□□ -1.92
ASI3	YNL008C	UTP9	P38882	575 aa	Known RBP	3.03	□□□□□ -1.92
ASI3	YNL008C	YHR210C	P38893	341 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	YJR154W	P47181	346 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	CRZ1	P53968	678 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	TOF2	Q02208	771 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	RLM1	Q12224	676 aa		3.03	□□□□□ -1.92
ASI3	YNL008C	GAL80	P04387	435 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	HOM3	P10869	527 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	MSR1	P38714	643 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	CSM2	P40465	213 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	MET18	P40469	1032 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	IKS1	P47042	667 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	ALT2	P52892	507 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	DRN1	P53255	507 aa	Known RBP	3.02	□□□□□ -1.93
ASI3	YNL008C	YMR087W	Q04299	284 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	GRX6	Q12438	231 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	AVL9	Q12500	764 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	YOL159C-A	Q3E769	90 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	RAD52	P06778	471 aa	Known RBP	3.02	□□□□□ -1.93
ASI3	YNL008C	PEP4	P07267	405 aa	Known RBP	3.02	□□□□□ -1.93
ASI3	YNL008C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
ASI3	YNL008C	YML002W	P0CF17	737 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	MRS3	P10566	314 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	RPC53	P25441	422 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	GPI10	P30777	616 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	ROK1	P45818	564 aa	Predicted RBP	3.02	□□□□□ -1.93
ASI3	YNL008C	RSC1	P53236	928 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	JJJ1	P53863	590 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	FIN1	Q03898	291 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	YOR365C	Q08844	703 aa		3.02	□□□□□ -1.93
ASI3	YNL008C	APE1	P14904	514 aa		3.01	□□□□□ -1.93
ASI3	YNL008C	VMA8	P32610	256 aa	Known RBP	3.01	□□□□□ -1.93
ASI3	YNL008C	WBP1	P33767	430 aa	Known RBP	3.01	□□□□□ -1.93
ASI3	YNL008C	OSH3	P38713	996 aa	Known RBP	3.01	□□□□□ -1.93
ASI3	YNL008C	SMF1	P38925	575 aa		3.01	□□□□□ -1.93
ASI3	YNL008C	ALK1	P43633	760 aa	Known RBP	3.01	□□□□□ -1.93
ASI3	YNL008C	THP1	Q08231	455 aa		3.01	□□□□□ -1.93
ASI3	YNL008C	RIM20	Q12033	661 aa		3.01	□□□□□ -1.93
ASI3	YNL008C	SFI1	Q12369	946 aa		3.01	□□□□□ -1.93
ASI3	YNL008C	ELO2	P25358	347 aa		3	□□□□□ -1.93
ASI3	YNL008C	YME1	P32795	747 aa		3	□□□□□ -1.93
ASI3	YNL008C	SHP1	P34223	423 aa		3	□□□□□ -1.93
ASI3	YNL008C	SNU66	Q12420	587 aa	Predicted RBP	3	□□□□□ -1.93
ASI3	YNL008C	PDX1	P16451	410 aa		3	□□□□□ -1.93
ASI3	YNL008C	PAP1	P29468	568 aa	Known RBP	3	□□□□□ -1.93
ASI3	YNL008C	PRO3	P32263	286 aa	Known RBP	3	□□□□□ -1.93
ASI3	YNL008C	SIP2	P34164	415 aa	Known RBP	3	□□□□□ -1.93
ASI3	YNL008C	VID24	P38263	362 aa		3	□□□□□ -1.93
ASI3	YNL008C	VPS52	P39904	641 aa		3	□□□□□ -1.93
ASI3	YNL008C	PET130	P47065	347 aa		3	□□□□□ -1.93
ASI3	YNL008C	MDG1	P53885	366 aa		3	□□□□□ -1.93
ASI3	YNL008C	RPM2	Q02773	1202 aa		3	□□□□□ -1.93
ASI3	YNL008C	YDR239C	Q03780	787 aa		3	□□□□□ -1.93
ASI3	YNL008C	MRD1	Q06106	887 aa	Known RBP	3	□□□□□ -1.93
ASI3	YNL008C	YMR230W-A	Q3E7B5	62 aa		3	□□□□□ -1.93
ASI3	YNL008C	PRD1	P25375	712 aa		2.99	□□□□□ -1.93
ASI3	YNL008C	SAS3	P34218	831 aa		2.99	□□□□□ -1.93
ASI3	YNL008C	BNA4	P38169	460 aa		2.99	□□□□□ -1.93
ASI3	YNL008C	CST26	P38226	397 aa		2.99	□□□□□ -1.93
ASI3	YNL008C	TCM62	P38228	572 aa	Known RBP	2.99	□□□□□ -1.93
ASI3	YNL008C	TIF4631	P39935	952 aa	Known RBP	2.99	□□□□□ -1.93
ASI3	YNL008C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	RIP-Chip
ASI3	YNL008C	AIM22	P47051	409 aa		2.99	□□□□□ -1.93
ASI3	YNL008C	YDR131C	Q03899	556 aa		2.99	□□□□□ -1.93
ASI3	YNL008C	SUC2	P00724	532 aa		2.98	□□□□□ -1.93
ASI3	YNL008C	PHO2	P07269	559 aa		2.98	□□□□□ -1.93
ASI3	YNL008C	NDC1	P32500	655 aa		2.98	□□□□□ -1.93
ASI3	YNL008C	PTR2	P32901	601 aa		2.98	□□□□□ -1.93
ASI3	YNL008C	MUM2	P38236	366 aa		2.98	□□□□□ -1.93
ASI3	YNL008C	CCT4	P39078	528 aa	Known RBP	2.98	□□□□□ -1.93
ASI3	YNL008C	DHH1	P39517	506 aa	Known RBP	2.98	□□□□□ -1.93
ASI3	YNL008C	HEF3	P53978	1044 aa	Known RBP	2.98	□□□□□ -1.93
ASI3	YNL008C	RLI1	Q03195	608 aa	Known RBP	2.98	□□□□□ -1.93
ASI3	YNL008C	SLD5	Q03406	294 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms