RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C SLD5Q03406 294 aa0.55□□□□□ -2.32
NIP1YMR309C YML037CQ03703 340 aa0.55□□□□□ -2.32
NIP1YMR309C RAD30Q04049 632 aa0.55□□□□□ -2.32
NIP1YMR309C CIA1Q05583 330 aa0.55□□□□□ -2.32
NIP1YMR309C ETT1Q08421 412 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C TRM8Q12009 286 aa0.55□□□□□ -2.32
NIP1YMR309C CTF3Q12748 733 aa0.55□□□□□ -2.32
NIP1YMR309C RRP12Q12754 1228 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C YCR022CP25620 114 aa0.55□□□□□ -2.32
NIP1YMR309C YIH1P25637 258 aa0.55□□□□□ -2.32
NIP1YMR309C PAP1P29468 568 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C YBR144CP34215 104 aa0.55□□□□□ -2.32
NIP1YMR309C CBP4P37267 147 aa0.55□□□□□ -2.32
NIP1YMR309C HAT2P39984 401 aa0.55□□□□□ -2.32
NIP1YMR309C GWT1P47026 490 aa0.55□□□□□ -2.32
NIP1YMR309C AAD10P47182 288 aa0.55□□□□□ -2.32
NIP1YMR309C YGR021WP53212 290 aa0.55□□□□□ -2.32
NIP1YMR309C GOR1P53839 350 aa0.55□□□□□ -2.32
NIP1YMR309C EFM6P53970 246 aa0.55□□□□□ -2.32
NIP1YMR309C ELP3Q02908 557 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C VMS1Q04311 632 aaKnown RBP0.55□□□□□ -2.32
NIP1YMR309C YMR018WQ04364 514 aa0.55□□□□□ -2.32
NIP1YMR309C PHO92Q06390 306 aa0.55□□□□□ -2.32
NIP1YMR309C THP1Q08231 455 aa0.55□□□□□ -2.32
NIP1YMR309C ESA1Q08649 445 aa0.55□□□□□ -2.32
NIP1YMR309C FMP40Q08968 688 aaPredicted RBP0.55□□□□□ -2.32
NIP1YMR309C YER078W-AQ3E7A2 54 aa0.55□□□□□ -2.32
NIP1YMR309C SGS1P35187 1447 aa0.55□□□□□ -2.32
NIP1YMR309C SUP35P05453 685 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C ARD1P07347 238 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C AMD1P15274 810 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C HEM15P16622 393 aa0.54□□□□□ -2.32
NIP1YMR309C ISY1P21374 235 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C CPR4P25334 318 aa0.54□□□□□ -2.32
NIP1YMR309C DAL2P25335 343 aa0.54□□□□□ -2.32
NIP1YMR309C RVS161P25343 265 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C YCR007CP25354 239 aa0.54□□□□□ -2.32
NIP1YMR309C PUP3P25451 205 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C POL4P25615 582 aa0.54□□□□□ -2.32
NIP1YMR309C ARO2P28777 376 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C SHP1P34223 423 aa0.54□□□□□ -2.32
NIP1YMR309C FRE2P36033 711 aa0.54□□□□□ -2.32
NIP1YMR309C AUR1P36107 401 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C NUP133P36161 1157 aa0.54□□□□□ -2.32
NIP1YMR309C AXL2P38928 823 aa0.54□□□□□ -2.32
NIP1YMR309C YER010CP40011 234 aa0.54□□□□□ -2.32
NIP1YMR309C ALK1P43633 760 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C ARC1P46672 376 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C TIS11P47977 285 aa0.54□□□□□ -2.32
NIP1YMR309C LCL3P53153 274 aa0.54□□□□□ -2.32
NIP1YMR309C POP6P53218 158 aa0.54□□□□□ -2.32
NIP1YMR309C BSC5P53755 489 aa0.54□□□□□ -2.32
NIP1YMR309C IPI3P53877 555 aa0.54□□□□□ -2.32
NIP1YMR309C IGO1P53897 168 aa0.54□□□□□ -2.32
NIP1YMR309C TSR1Q07381 788 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C LUC7Q07508 261 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C MUM3Q08750 479 aa0.54□□□□□ -2.32
NIP1YMR309C RRG7Q08774 242 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C YPL199CQ08954 240 aa0.54□□□□□ -2.32
NIP1YMR309C HSH49Q99181 213 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C HIP1P06775 603 aa0.54□□□□□ -2.32
NIP1YMR309C RAD52P06778 471 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C YAR066WP0CX18 203 aa0.54□□□□□ -2.32
NIP1YMR309C YHR214WP0CX19 203 aa0.54□□□□□ -2.32
NIP1YMR309C CLN3P13365 580 aa0.54□□□□□ -2.32
NIP1YMR309C EST1P17214 699 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C PET123P17558 318 aa0.54□□□□□ -2.32
NIP1YMR309C ART10P18634 518 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C KGD1P20967 1014 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C SGV1P23293 657 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C CRM1P30822 1084 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C NDI1P32340 513 aa0.54□□□□□ -2.32
NIP1YMR309C SSE2P32590 693 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C UTR4P32626 227 aa0.54□□□□□ -2.32
NIP1YMR309C SDH3P33421 198 aa0.54□□□□□ -2.32
NIP1YMR309C SEF1P34228 1148 aa0.54□□□□□ -2.32
NIP1YMR309C SWD3P38123 315 aa0.54□□□□□ -2.32
NIP1YMR309C BNA4P38169 460 aa0.54□□□□□ -2.32
NIP1YMR309C RFS1P38234 210 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C YHR210CP38893 341 aa0.54□□□□□ -2.32
NIP1YMR309C ALG5P40350 334 aa0.54□□□□□ -2.32
NIP1YMR309C POP1P41812 875 aa0.54□□□□□ -2.32
NIP1YMR309C NCA3P46955 337 aa0.54□□□□□ -2.32
NIP1YMR309C YJR154WP47181 346 aa0.54□□□□□ -2.32
NIP1YMR309C LYS4P49367 693 aaPredicted RBP0.54□□□□□ -2.32
NIP1YMR309C VID30P53076 958 aa0.54□□□□□ -2.32
NIP1YMR309C SHY1P53266 389 aa0.54□□□□□ -2.32
NIP1YMR309C ZPR1P53303 486 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C TOF1P53840 1238 aa0.54□□□□□ -2.32
NIP1YMR309C PEX25Q02969 394 aa0.54□□□□□ -2.32
NIP1YMR309C VIP1Q06685 1146 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C THP3Q12049 470 aaKnown RBP0.54□□□□□ -2.32
NIP1YMR309C HUA2Q12134 243 aa0.54□□□□□ -2.32
NIP1YMR309C YLR108CQ12259 485 aa0.54□□□□□ -2.32
NIP1YMR309C HRT3Q12347 344 aa0.54□□□□□ -2.32
NIP1YMR309C RAV1P47104 1357 aa0.53□□□□□ -2.32
NIP1YMR309C MES1P00958 751 aaKnown RBP0.53□□□□□ -2.32
NIP1YMR309C PEP4P07267 405 aaKnown RBP0.53□□□□□ -2.32
NIP1YMR309C FUM1P08417 488 aaKnown RBP0.53□□□□□ -2.32
NIP1YMR309C SAM1P10659 382 aaKnown RBP0.53□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms