RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRE11	YMR224C	ARP5	P53946	755 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	YMR178W	Q03219	274 aa	Known RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	EMI2	Q04409	500 aa	Known RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	DCS1	Q06151	350 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	AIM39	Q08223	395 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	RPS10A	Q08745	105 aa	Predicted RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	MRH1	Q12117	320 aa	Predicted RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	MDM20	Q12387	796 aa	Known RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	CEX1	Q12453	761 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	CHO1	P08456	276 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	GAC1	P28006	793 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	YJU2	P28320	278 aa	Predicted RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	EBP2	P36049	427 aa	Known RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	GLG1	P36143	616 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	DBP8	P38719	431 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	YHR131C	P38835	850 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	RIX1	P38883	763 aa	Predicted RBP	5.11	□□□□□ -1.59
MRE11	YMR224C	MIT1	P40002	666 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	VHS2	P40463	436 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	ATG27	P46989	271 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	PHO23	P50947	330 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	YGL117W	P53133	265 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	YGL108C	P53139	140 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	ALF1	P53904	254 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	SLG1	P54867	378 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	CYK3	Q07533	885 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	MTR10	Q99189	972 aa		5.11	□□□□□ -1.59
MRE11	YMR224C	GAS1	P22146	559 aa	Known RBP	5.1	□□□□□ -1.59
MRE11	YMR224C	GRR1	P24814	1151 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	HIR2	P32480	875 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	MRPL40	P36534	297 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	YMC2	P38087	329 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	CBR1	P38626	284 aa	Known RBP	5.1	□□□□□ -1.59
MRE11	YMR224C	VPS41	P38959	992 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	RPS10B	P46784	105 aa	Known RBP	5.1	□□□□□ -1.59
MRE11	YMR224C	YPR003C	P53394	754 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	CPR8	P53728	308 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	RAD34	Q06665	692 aa		5.1	□□□□□ -1.59
MRE11	YMR224C	YMR084W	A2P2R3	262 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	GPH1	P06738	902 aa	Known RBP	5.09	□□□□□ -1.59
MRE11	YMR224C	GEX1	P25596	615 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	MCM4	P30665	933 aa	Known RBP	5.09	□□□□□ -1.59
MRE11	YMR224C	MMS4	P38257	691 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	SUL1	P38359	859 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	PCL5	P38794	229 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	MBB1	P39534	108 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	ELP2	P42935	788 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	TDA10	P42938	290 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	RTC1	Q08281	1341 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	CBP1	P07252	654 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	MRP2	P10663	115 aa	Predicted RBP	5.09	□□□□□ -1.59
MRE11	YMR224C	ANS1	P38832	159 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	VPS45	P38932	577 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	ECM30	Q06673	1274 aa		5.09	□□□□□ -1.59
MRE11	YMR224C	COR1	P07256	457 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	RAP1	P11938	827 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	NDI1	P32340	513 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	VPS17	P32913	551 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	RRP1	P35178	278 aa	Predicted RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	ASC1	P38011	319 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	BDH2	P39713	417 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	RPN14	P53196	417 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	COP1	P53622	1201 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	RSM23	Q01163	450 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	NDL1	Q06568	189 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	DIS3	Q08162	1001 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	CAR1	P00812	333 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	RHO2	P06781	192 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	ADE5,7	P07244	802 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	TKL1	P23254	680 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	MTR2	P34232	184 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	DEF1	P35732	738 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	OMA1	P36163	345 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	AIP1	P46680	615 aa	Known RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	RPA34	P47006	233 aa	Predicted RBP	5.08	□□□□□ -1.6
MRE11	YMR224C	ABZ2	Q03266	374 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	MSC3	Q05812	728 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	YOL073C	Q08232	322 aa		5.08	□□□□□ -1.6
MRE11	YMR224C	NCE102	Q12207	173 aa	RIP-Chip data	5.08	□□□□□ -1.6	not detected
MRE11	YMR224C	PEP4	P07267	405 aa	Known RBP	5.07	□□□□□ -1.6
MRE11	YMR224C	RMD9	P53140	646 aa	Known RBP	5.07	□□□□□ -1.6
MRE11	YMR224C	OCA2	P53949	197 aa		5.07	□□□□□ -1.6
MRE11	YMR224C	UTP6	Q02354	440 aa	Known RBP	5.07	□□□□□ -1.6
MRE11	YMR224C	PFA5	Q03289	374 aa		5.07	□□□□□ -1.6
MRE11	YMR224C	YLR455W	Q06188	304 aa		5.07	□□□□□ -1.6
MRE11	YMR224C	RKM1	Q08961	583 aa	Predicted RBP	5.07	□□□□□ -1.6
MRE11	YMR224C	RPL7A	P05737	244 aa	Known RBP	5.06	□□□□□ -1.6
MRE11	YMR224C	PUT2	P07275	575 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	RIP1	P08067	215 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	KRE2	P27809	442 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	SAC1	P32368	623 aa	Known RBP	5.06	□□□□□ -1.6
MRE11	YMR224C	YHL017W	P38745	532 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	YMR147W	P40218	223 aa	Known RBP	5.06	□□□□□ -1.6
MRE11	YMR224C	ULP2	P40537	1034 aa	Predicted RBP	5.06	□□□□□ -1.6
MRE11	YMR224C	YGR126W	P53274	230 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	VPS20	Q04272	221 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	THI3	Q07471	609 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	RPL7B	Q12213	244 aa	Known RBP	5.06	□□□□□ -1.6
MRE11	YMR224C	SFG1	Q12507	346 aa		5.06	□□□□□ -1.6
MRE11	YMR224C	PDE2	P06776	526 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms