RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W SUI2P20459 304 aaKnown RBP3.28□□□□□ -1.88
NOP56YLR197W SEC62P21825 274 aa3.28□□□□□ -1.88
NOP56YLR197W ECM15P35195 104 aa3.28□□□□□ -1.88
NOP56YLR197W FMP46P36141 133 aaKnown RBP3.28□□□□□ -1.88
NOP56YLR197W YHR210CP38893 341 aa3.28□□□□□ -1.88
NOP56YLR197W YTA12P40341 825 aa3.28□□□□□ -1.88
NOP56YLR197W DRN1P53255 507 aaKnown RBP3.28□□□□□ -1.88
NOP56YLR197W TOF2Q02208 771 aa3.28□□□□□ -1.88
NOP56YLR197W SYF1Q04048 859 aaPredicted RBP3.28□□□□□ -1.88
NOP56YLR197W YMR087WQ04299 284 aa3.28□□□□□ -1.88
NOP56YLR197W COQ9Q05779 260 aa3.28□□□□□ -1.88
NOP56YLR197W YOR365CQ08844 703 aa3.28□□□□□ -1.88
NOP56YLR197W GAL80P04387 435 aa3.27□□□□□ -1.89
NOP56YLR197W PEP4P07267 405 aaKnown RBP3.27□□□□□ -1.89
NOP56YLR197W DFR1P07807 211 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
NOP56YLR197W YML002WP0CF17 737 aa3.27□□□□□ -1.89
NOP56YLR197W RED1P14291 827 aa3.27□□□□□ -1.89
NOP56YLR197W ELO2P25358 347 aa3.27□□□□□ -1.89
NOP56YLR197W NPL6P32832 435 aa3.27□□□□□ -1.89
NOP56YLR197W YNK1P36010 153 aaKnown RBP3.27□□□□□ -1.89
NOP56YLR197W OSH3P38713 996 aaKnown RBP3.27□□□□□ -1.89
NOP56YLR197W MSR1P38714 643 aa3.27□□□□□ -1.89
NOP56YLR197W CSM2P40465 213 aa3.27□□□□□ -1.89
NOP56YLR197W IKS1P47042 667 aa3.27□□□□□ -1.89
NOP56YLR197W YJR154WP47181 346 aa3.27□□□□□ -1.89
NOP56YLR197W ALT2P52892 507 aa3.27□□□□□ -1.89
NOP56YLR197W CRZ1P53968 678 aa3.27□□□□□ -1.89
NOP56YLR197W TIP41Q12199 356 aa3.27□□□□□ -1.89
NOP56YLR197W RLM1Q12224 676 aa3.27□□□□□ -1.89
NOP56YLR197W SFI1Q12369 946 aa3.27□□□□□ -1.89
NOP56YLR197W AVL9Q12500 764 aa3.27□□□□□ -1.89
NOP56YLR197W MET17P06106 444 aa3.26□□□□□ -1.89
NOP56YLR197W RAD52P06778 471 aaKnown RBP3.26□□□□□ -1.89
NOP56YLR197W APE1P14904 514 aa3.26□□□□□ -1.89
NOP56YLR197W SRO77P38163 1010 aa3.26□□□□□ -1.89
NOP56YLR197W RPM2Q02773 1202 aa3.26□□□□□ -1.89
NOP56YLR197W RRG1Q12167 365 aaPredicted RBP3.26□□□□□ -1.89
NOP56YLR197W ERP4Q12450 207 aa3.26□□□□□ -1.89
NOP56YLR197W YMR230W-AQ3E7B5 62 aa3.26□□□□□ -1.89
NOP56YLR197W ROX1P25042 368 aa3.25□□□□□ -1.89
NOP56YLR197W WBP1P33767 430 aaKnown RBP3.25□□□□□ -1.89
NOP56YLR197W SIP2P34164 415 aaKnown RBP3.25□□□□□ -1.89
NOP56YLR197W SHP1P34223 423 aa3.25□□□□□ -1.89
NOP56YLR197W MUM2P38236 366 aa3.25□□□□□ -1.89
NOP56YLR197W MET28P40573 187 aa3.25□□□□□ -1.89
NOP56YLR197W ALK1P43633 760 aaKnown RBP3.25□□□□□ -1.89
NOP56YLR197W FIN1Q03898 291 aa3.25□□□□□ -1.89
NOP56YLR197W THP1Q08231 455 aa3.25□□□□□ -1.89
NOP56YLR197W SUC2P00724 532 aa3.24□□□□□ -1.89
NOP56YLR197W PRD1P25375 712 aa3.24□□□□□ -1.89
NOP56YLR197W DUG2P38149 878 aa3.24□□□□□ -1.89
NOP56YLR197W TCM62P38228 572 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W CCT4P39078 528 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W DHH1P39517 506 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W YEL057CP39983 233 aa3.24□□□□□ -1.89
NOP56YLR197W DOT5P40553 215 aa3.24□□□□□ -1.89
NOP56YLR197W ROK1P45818 564 aaPredicted RBP3.24□□□□□ -1.89
NOP56YLR197W AIM22P47051 409 aa3.24□□□□□ -1.89
NOP56YLR197W SLD5Q03406 294 aa3.24□□□□□ -1.89
NOP56YLR197W HCR1Q05775 265 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W SYO1Q07395 620 aa3.24□□□□□ -1.89
NOP56YLR197W PHO2P07269 559 aa3.24□□□□□ -1.89
NOP56YLR197W AMD1P15274 810 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W PRP2P20095 876 aaPredicted RBP3.24□□□□□ -1.89
NOP56YLR197W PAP1P29468 568 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W PRO3P32263 286 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W ERG3P32353 365 aa3.24□□□□□ -1.89
NOP56YLR197W YME1P32795 747 aa3.24□□□□□ -1.89
NOP56YLR197W MRE11P32829 692 aa3.24□□□□□ -1.89
NOP56YLR197W NFU1P32860 256 aa3.24□□□□□ -1.89
NOP56YLR197W VPS52P39904 641 aa3.24□□□□□ -1.89
NOP56YLR197W TIF4631P39935 952 aaKnown RBP3.24□□□□□ -1.89
NOP56YLR197W MET18P40469 1032 aa3.24□□□□□ -1.89
NOP56YLR197W SCD6P45978 349 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
NOP56YLR197W BNA5Q05979 453 aa3.24□□□□□ -1.89
NOP56YLR197W YTH1Q06102 208 aaPredicted RBP3.24□□□□□ -1.89
NOP56YLR197W RIM20Q12033 661 aa3.24□□□□□ -1.89
NOP56YLR197W RTN2Q12443 393 aa3.24□□□□□ -1.89
NOP56YLR197W RPL15AP05748 204 aaKnown RBP3.23□□□□□ -1.89
NOP56YLR197W ATS1P31386 333 aa3.23□□□□□ -1.89
NOP56YLR197W NDC1P32500 655 aa3.23□□□□□ -1.89
NOP56YLR197W UTR4P32626 227 aa3.23□□□□□ -1.89
NOP56YLR197W BYE1P36106 594 aa3.23□□□□□ -1.89
NOP56YLR197W BNA4P38169 460 aa3.23□□□□□ -1.89
NOP56YLR197W VID24P38263 362 aa3.23□□□□□ -1.89
NOP56YLR197W RTT101P47050 842 aa3.23□□□□□ -1.89
NOP56YLR197W ZPR1P53303 486 aaKnown RBP3.23□□□□□ -1.89
NOP56YLR197W HEF3P53978 1044 aaKnown RBP3.23□□□□□ -1.89
NOP56YLR197W RLI1Q03195 608 aaKnown RBP3.23□□□□□ -1.89
NOP56YLR197W YDR239CQ03780 787 aa3.23□□□□□ -1.89
NOP56YLR197W GRX6Q12438 231 aa3.23□□□□□ -1.89
NOP56YLR197W YCR007CP25354 239 aa3.22□□□□□ -1.89
NOP56YLR197W GPI10P30777 616 aa3.22□□□□□ -1.89
NOP56YLR197W PTR2P32901 601 aa3.22□□□□□ -1.89
NOP56YLR197W LOS1P33418 1100 aaPredicted RBP3.22□□□□□ -1.89
NOP56YLR197W MSN2P33748 704 aa3.22□□□□□ -1.89
NOP56YLR197W CST26P38226 397 aa3.22□□□□□ -1.89
NOP56YLR197W MBB1P39534 108 aa3.22□□□□□ -1.89
NOP56YLR197W PET130P47065 347 aa3.22□□□□□ -1.89
NOP56YLR197W JJJ1P53863 590 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 508.6 ms