RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W GTB1Q04924 702 aa1.98□□□□□ -2.09
CFT2YLR115W YMR034CQ05131 434 aaPredicted RBP1.98□□□□□ -2.09
CFT2YLR115W ADE13Q05911 482 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W ECM22Q05958 814 aaPredicted RBP1.98□□□□□ -2.09
CFT2YLR115W RTC5Q12108 567 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W RPL42AP0CX27 106 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W RPL42BP0CX28 106 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W MTF2P10849 440 aa1.98□□□□□ -2.09
CFT2YLR115W CDC24P11433 854 aaPredicted RBP1.98□□□□□ -2.09
CFT2YLR115W MDH1P17505 334 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
CFT2YLR115W MRPL25P23369 157 aa1.98□□□□□ -2.09
CFT2YLR115W YSP3P25036 478 aa1.98□□□□□ -2.09
CFT2YLR115W URK1P27515 501 aa1.98□□□□□ -2.09
CFT2YLR115W PAP1P29468 568 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W GYP6P32806 458 aa1.98□□□□□ -2.09
CFT2YLR115W PPQ1P32945 549 aa1.98□□□□□ -2.09
CFT2YLR115W STB6P36085 766 aa1.98□□□□□ -2.09
CFT2YLR115W GEX2P36173 615 aa1.98□□□□□ -2.09
CFT2YLR115W REG2P38232 338 aa1.98□□□□□ -2.09
CFT2YLR115W GDT1P38301 280 aaPredicted RBP1.98□□□□□ -2.09
CFT2YLR115W AIM10P39965 576 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W YER034WP40022 185 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W YJR061WP40355 935 aa1.98□□□□□ -2.09
CFT2YLR115W SEC9P40357 651 aa1.98□□□□□ -2.09
CFT2YLR115W MSY1P48527 492 aa1.98□□□□□ -2.09
CFT2YLR115W SGF73P53165 657 aa1.98□□□□□ -2.09
CFT2YLR115W ARC35P53731 342 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W CAC2Q04199 468 aa1.98□□□□□ -2.09
CFT2YLR115W ERB1Q04660 807 aaKnown RBP1.98□□□□□ -2.09
CFT2YLR115W GSH2Q08220 491 aa1.98□□□□□ -2.09
CFT2YLR115W DSE3Q08729 430 aa1.98□□□□□ -2.09
CFT2YLR115W RPL6BP05739 176 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W ADE3P07245 946 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W BIK1P11709 440 aa1.97□□□□□ -2.09
CFT2YLR115W EST1P17214 699 aaPredicted RBP1.97□□□□□ -2.09
CFT2YLR115W CLB1P24868 471 aa1.97□□□□□ -2.09
CFT2YLR115W ERG3P32353 365 aa1.97□□□□□ -2.09
CFT2YLR115W PIM1P36775 1133 aa1.97□□□□□ -2.09
CFT2YLR115W SLX1P38324 304 aa1.97□□□□□ -2.09
CFT2YLR115W YHR054CP38780 354 aa1.97□□□□□ -2.09
CFT2YLR115W CTM1P38818 585 aa1.97□□□□□ -2.09
CFT2YLR115W OSW5P40219 148 aa1.97□□□□□ -2.09
CFT2YLR115W RPL6AQ02326 176 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W YDR131CQ03899 556 aa1.97□□□□□ -2.09
CFT2YLR115W RBA50Q04418 439 aa1.97□□□□□ -2.09
CFT2YLR115W SNO4Q04902 237 aa1.97□□□□□ -2.09
CFT2YLR115W HSP33Q08914 237 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W HSP32Q08992 237 aa1.97□□□□□ -2.09
CFT2YLR115W RIM20Q12033 661 aa1.97□□□□□ -2.09
CFT2YLR115W RRP36Q12481 300 aaPredicted RBP1.97□□□□□ -2.09
CFT2YLR115W SWI4P25302 1093 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W PRD1P25375 712 aa1.97□□□□□ -2.09
CFT2YLR115W DPH5P32469 300 aaPredicted RBP1.97□□□□□ -2.09
CFT2YLR115W DAD2P36162 133 aa1.97□□□□□ -2.09
CFT2YLR115W KTR3P38130 404 aaPredicted RBP1.97□□□□□ -2.09
CFT2YLR115W LEU5P38702 357 aa1.97□□□□□ -2.09
CFT2YLR115W AFG3P39925 761 aa1.97□□□□□ -2.09
CFT2YLR115W LSM5P40089 93 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W PUG1P40100 303 aa1.97□□□□□ -2.09
CFT2YLR115W SKP2P42843 763 aa1.97□□□□□ -2.09
CFT2YLR115W VID30P53076 958 aa1.97□□□□□ -2.09
CFT2YLR115W LCL3P53153 274 aa1.97□□□□□ -2.09
CFT2YLR115W DUO1P53168 247 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W CPR6P53691 371 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W YNR068CP53754 272 aa1.97□□□□□ -2.09
CFT2YLR115W ERV25P54837 211 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W EGD1Q02642 157 aaKnown RBP1.97□□□□□ -2.09
CFT2YLR115W SNZ1Q03148 297 aa1.97□□□□□ -2.09
CFT2YLR115W CIA1Q05583 330 aa1.97□□□□□ -2.09
CFT2YLR115W PDR8Q06149 701 aa1.97□□□□□ -2.09
CFT2YLR115W KEL3Q08979 651 aaPredicted RBP1.97□□□□□ -2.09
CFT2YLR115W SSK22P25390 1331 aaPredicted RBP1.96□□□□□ -2.1
CFT2YLR115W GPA1P08539 472 aa1.96□□□□□ -2.1
CFT2YLR115W RIT1P23796 513 aa1.96□□□□□ -2.1
CFT2YLR115W RRP7P25368 297 aaPredicted RBP1.96□□□□□ -2.1
CFT2YLR115W GCD7P32502 381 aaPredicted RBP1.96□□□□□ -2.1
CFT2YLR115W UBP11P36026 717 aa1.96□□□□□ -2.1
CFT2YLR115W MIC60P36112 540 aa1.96□□□□□ -2.1
CFT2YLR115W DED81P38707 554 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W MET30P39014 640 aa1.96□□□□□ -2.1
CFT2YLR115W NPR2P39923 615 aa1.96□□□□□ -2.1
CFT2YLR115W PHM8P40025 321 aa1.96□□□□□ -2.1
CFT2YLR115W SPO22P40511 975 aa1.96□□□□□ -2.1
CFT2YLR115W PKP1P40530 394 aa1.96□□□□□ -2.1
CFT2YLR115W GCD10P41814 478 aa1.96□□□□□ -2.1
CFT2YLR115W TRF5P48561 642 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W CTF18P49956 741 aa1.96□□□□□ -2.1
CFT2YLR115W YGL036WP53185 909 aaPredicted RBP1.96□□□□□ -2.1
CFT2YLR115W MGR3Q04472 501 aa1.96□□□□□ -2.1
CFT2YLR115W SKG3Q06315 1026 aa1.96□□□□□ -2.1
CFT2YLR115W IWR1Q07532 353 aaPredicted RBP1.96□□□□□ -2.1
CFT2YLR115W FRE3Q08905 711 aa1.96□□□□□ -2.1
CFT2YLR115W YDR061WQ12298 539 aa1.96□□□□□ -2.1
CFT2YLR115W CTF3Q12748 733 aa1.96□□□□□ -2.1
CFT2YLR115W STE2D6VTK4 431 aa1.96□□□□□ -2.1
CFT2YLR115W CBS1P14066 229 aa1.96□□□□□ -2.1
CFT2YLR115W SRV2P17555 526 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W OLE1P21147 510 aaKnown RBP1.96□□□□□ -2.1
CFT2YLR115W BOS1P25385 244 aa1.96□□□□□ -2.1
CFT2YLR115W ADK2P26364 225 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms