RNA–Protein interactions for RNA: YHR038W

RRF1, Transcript of Mitochondrial ribosome recycling factor, yeastyeast

Gene RRF1, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRF1YHR038W BUD22Q04347 519 aaKnown RBP2.36□□□□□ -2.03
RRF1YHR038W TFC6Q06339 672 aa2.36□□□□□ -2.03
RRF1YHR038W NFI1Q12216 726 aa2.36□□□□□ -2.03
RRF1YHR038W SKM1Q12469 655 aa2.36□□□□□ -2.03
RRF1YHR038W HEM2P05373 342 aa2.35□□□□□ -2.03
RRF1YHR038W SUP35P05453 685 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W CPR1P14832 162 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W THR4P16120 514 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W KAR3P17119 729 aa2.35□□□□□ -2.03
RRF1YHR038W IMG1P25626 169 aa2.35□□□□□ -2.03
RRF1YHR038W RPL5P26321 297 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W PRS1P32895 427 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W YBL055CP34220 418 aaPredicted RBP2.35□□□□□ -2.03
RRF1YHR038W NDT80P38830 627 aa2.35□□□□□ -2.03
RRF1YHR038W FMP10P40098 244 aa2.35□□□□□ -2.03
RRF1YHR038W YGR021WP53212 290 aa2.35□□□□□ -2.03
RRF1YHR038W BTN2P53286 410 aa2.35□□□□□ -2.03
RRF1YHR038W YNL247WP53852 767 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W INN1P53901 409 aa2.35□□□□□ -2.03
RRF1YHR038W GTR1Q00582 310 aa2.35□□□□□ -2.03
RRF1YHR038W RLI1Q03195 608 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W GIR2Q03768 265 aaPredicted RBP2.35□□□□□ -2.03
RRF1YHR038W VMS1Q04311 632 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W RRN11Q04712 507 aa2.35□□□□□ -2.03
RRF1YHR038W IVY1Q04934 453 aa2.35□□□□□ -2.03
RRF1YHR038W YPR172WQ06608 200 aa2.35□□□□□ -2.03
RRF1YHR038W SYO1Q07395 620 aa2.35□□□□□ -2.03
RRF1YHR038W RIX7Q07844 837 aaKnown RBP2.35□□□□□ -2.03
RRF1YHR038W HNT3Q08702 217 aa2.35□□□□□ -2.03
RRF1YHR038W GLE1Q12315 538 aa2.35□□□□□ -2.03
RRF1YHR038W YCL021W-AQ96VH3 125 aa2.35□□□□□ -2.03
RRF1YHR038W SAC3P46674 1301 aa2.35□□□□□ -2.03
RRF1YHR038W HHF1P02309 103 aaKnown RBP2.34□□□□□ -2.03
RRF1YHR038W CDC24P11433 854 aaPredicted RBP2.34□□□□□ -2.03
RRF1YHR038W SPT15P13393 240 aaKnown RBP2.34□□□□□ -2.03
RRF1YHR038W PMR1P13586 950 aa2.34□□□□□ -2.03
RRF1YHR038W PUT3P25502 979 aaPredicted RBP2.34□□□□□ -2.03
RRF1YHR038W FUN19P28003 413 aaPredicted RBP2.34□□□□□ -2.03
RRF1YHR038W MFT1P33441 392 aaKnown RBP2.34□□□□□ -2.03
RRF1YHR038W MSN2P33748 704 aa2.34□□□□□ -2.03
RRF1YHR038W YBL059WP34224 193 aa2.34□□□□□ -2.03
RRF1YHR038W BLI1P35727 113 aa2.34□□□□□ -2.03
RRF1YHR038W CIN4P39110 191 aa2.34□□□□□ -2.03
RRF1YHR038W YJR154WP47181 346 aa2.34□□□□□ -2.03
RRF1YHR038W RRT6P53117 311 aaPredicted RBP2.34□□□□□ -2.03
RRF1YHR038W PXR1P53335 271 aaPredicted RBP2.34□□□□□ -2.03
RRF1YHR038W MSO1P53604 210 aaKnown RBP2.34□□□□□ -2.03
RRF1YHR038W WSC2P53832 503 aa2.34□□□□□ -2.03
RRF1YHR038W NDL1Q06568 189 aa2.34□□□□□ -2.03
RRF1YHR038W ARR1Q06596 294 aa2.34□□□□□ -2.03
RRF1YHR038W YDL057WQ07379 328 aa2.34□□□□□ -2.03
RRF1YHR038W HSP42Q12329 375 aa2.34□□□□□ -2.03
RRF1YHR038W YDL012CQ12489 107 aa2.34□□□□□ -2.03
RRF1YHR038W ECM5Q03214 1411 aa2.34□□□□□ -2.04
RRF1YHR038W MF(ALPHA)1P01149 165 aa2.33□□□□□ -2.04
RRF1YHR038W ROX1P25042 368 aa2.33□□□□□ -2.04
RRF1YHR038W YCR007CP25354 239 aa2.33□□□□□ -2.04
RRF1YHR038W PSO2P30620 661 aa2.33□□□□□ -2.04
RRF1YHR038W ZUO1P32527 433 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W MTR2P34232 184 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W RSM22P36056 628 aa2.33□□□□□ -2.04
RRF1YHR038W MAL33P38157 468 aa2.33□□□□□ -2.04
RRF1YHR038W YBL029WP38201 376 aa2.33□□□□□ -2.04
RRF1YHR038W MED8P38304 223 aa2.33□□□□□ -2.04
RRF1YHR038W PET100P38958 111 aa2.33□□□□□ -2.04
RRF1YHR038W SCD6P45978 349 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
RRF1YHR038W ARC1P46672 376 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W KEL2P50090 882 aa2.33□□□□□ -2.04
RRF1YHR038W DSD1P53095 428 aa2.33□□□□□ -2.04
RRF1YHR038W BSC5P53755 489 aa2.33□□□□□ -2.04
RRF1YHR038W JJJ1P53863 590 aa2.33□□□□□ -2.04
RRF1YHR038W BNI5P53890 448 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W CBK1P53894 756 aa2.33□□□□□ -2.04
RRF1YHR038W EFM6P53970 246 aa2.33□□□□□ -2.04
RRF1YHR038W RRB1Q04225 511 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W SNO4Q04902 237 aa2.33□□□□□ -2.04
RRF1YHR038W TMC1Q08422 150 aaPredicted RBP2.33□□□□□ -2.04
RRF1YHR038W HSP33Q08914 237 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W HSP32Q08992 237 aa2.33□□□□□ -2.04
RRF1YHR038W SGT2Q12118 346 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W RRP12Q12754 1228 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W TOP2P06786 1428 aaKnown RBP2.33□□□□□ -2.04
RRF1YHR038W CDC31P06704 161 aaKnown RBP2.32□□□□□ -2.04
RRF1YHR038W RAD3P06839 778 aa2.32□□□□□ -2.04
RRF1YHR038W NAT1P12945 854 aaKnown RBP2.32□□□□□ -2.04
RRF1YHR038W AMD1P15274 810 aaKnown RBP2.32□□□□□ -2.04
RRF1YHR038W OPI1P21957 404 aa2.32□□□□□ -2.04
RRF1YHR038W PUP3P25451 205 aaKnown RBP2.32□□□□□ -2.04
RRF1YHR038W YIH1P25637 258 aa2.32□□□□□ -2.04
RRF1YHR038W BRF1P29056 596 aa2.32□□□□□ -2.04
RRF1YHR038W FRE1P32791 686 aa2.32□□□□□ -2.04
RRF1YHR038W MPE1P35728 441 aaKnown RBP2.32□□□□□ -2.04
RRF1YHR038W RPC37P36121 282 aa2.32□□□□□ -2.04
RRF1YHR038W NUP133P36161 1157 aa2.32□□□□□ -2.04
RRF1YHR038W ERP2P39704 215 aa2.32□□□□□ -2.04
RRF1YHR038W NOC2P39744 710 aaKnown RBP2.32□□□□□ -2.04
RRF1YHR038W YGL039WP53183 348 aaKnown RBP2.32□□□□□ -2.04
RRF1YHR038W YNL050CP53952 270 aa2.32□□□□□ -2.04
RRF1YHR038W YOR387CQ08910 206 aa2.32□□□□□ -2.04
RRF1YHR038W FMP40Q08968 688 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms