RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	FUR1	P18562	216 aa	Known RBP	4.09	□□□□□ -1.75
NUG1	YER006W	PHO13	P19881	312 aa		4.09	□□□□□ -1.75
NUG1	YER006W	PRR1	P28708	518 aa		4.09	□□□□□ -1.75
NUG1	YER006W	MCM10	P32354	571 aa		4.09	□□□□□ -1.75
NUG1	YER006W	YBL055C	P34220	418 aa	Predicted RBP	4.09	□□□□□ -1.75
NUG1	YER006W	LOT5	P34234	306 aa		4.09	□□□□□ -1.75
NUG1	YER006W	SMF1	P38925	575 aa		4.09	□□□□□ -1.75
NUG1	YER006W	GTT1	P40582	234 aa		4.09	□□□□□ -1.75
NUG1	YER006W	SLS1	P42900	643 aa		4.09	□□□□□ -1.75
NUG1	YER006W	YFR018C	P43599	363 aa		4.09	□□□□□ -1.75
NUG1	YER006W	CCC1	P47818	322 aa		4.09	□□□□□ -1.75
NUG1	YER006W	ASE1	P50275	885 aa		4.09	□□□□□ -1.75
NUG1	YER006W	VPS62	P53285	467 aa		4.09	□□□□□ -1.75
NUG1	YER006W	SAM50	P53969	484 aa		4.09	□□□□□ -1.75
NUG1	YER006W	UBX4	P54730	416 aa		4.09	□□□□□ -1.75
NUG1	YER006W	PRP42	Q03776	544 aa	Known RBP	4.09	□□□□□ -1.75
NUG1	YER006W	GSF2	Q04697	403 aa	Known RBP	4.09	□□□□□ -1.75
NUG1	YER006W	RCO1	Q04779	684 aa		4.09	□□□□□ -1.75
NUG1	YER006W	SPR28	Q04921	423 aa		4.09	□□□□□ -1.75
NUG1	YER006W	SPH1	Q06160	661 aa		4.09	□□□□□ -1.75
NUG1	YER006W	YLR173W	Q06247	608 aa		4.09	□□□□□ -1.75
NUG1	YER006W	TOS4	Q06266	489 aa		4.09	□□□□□ -1.75
NUG1	YER006W	CDA2	Q06703	312 aa		4.09	□□□□□ -1.75
NUG1	YER006W	REH1	Q06709	432 aa		4.09	□□□□□ -1.75
NUG1	YER006W	SPE3	Q12074	293 aa	Known RBP	4.09	□□□□□ -1.75
NUG1	YER006W	DCS2	Q12123	353 aa		4.09	□□□□□ -1.75
NUG1	YER006W	LPX1	Q12405	387 aa	Known RBP	4.09	□□□□□ -1.75
NUG1	YER006W	NCB2	Q92317	146 aa		4.09	□□□□□ -1.75
NUG1	YER006W	MDM12	Q92328	271 aa		4.09	□□□□□ -1.75
NUG1	YER006W	FRT1	Q99332	602 aa		4.09	□□□□□ -1.75
NUG1	YER006W	GCN4	P03069	281 aa		4.08	□□□□□ -1.76
NUG1	YER006W	SCEI	P03882	235 aa		4.08	□□□□□ -1.76
NUG1	YER006W	LEU4	P06208	619 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	MET3	P08536	511 aa		4.08	□□□□□ -1.76
NUG1	YER006W	MAS1	P10507	462 aa		4.08	□□□□□ -1.76
NUG1	YER006W	MTF2	P10849	440 aa		4.08	□□□□□ -1.76
NUG1	YER006W	PCK1	P10963	549 aa		4.08	□□□□□ -1.76
NUG1	YER006W	COX11	P19516	300 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	SGV1	P23293	657 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	CMK1	P27466	446 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	PEX3	P28795	441 aa		4.08	□□□□□ -1.76
NUG1	YER006W	PET309	P32522	965 aa	Predicted RBP	4.08	□□□□□ -1.76
NUG1	YER006W	SUR1	P33300	382 aa		4.08	□□□□□ -1.76
NUG1	YER006W	TSA1	P34760	196 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	AST1	P35183	429 aa		4.08	□□□□□ -1.76
NUG1	YER006W	STB6	P36085	766 aa		4.08	□□□□□ -1.76
NUG1	YER006W	NTR2	P36118	322 aa	Predicted RBP	4.08	□□□□□ -1.76
NUG1	YER006W	UTP30	P36144	274 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	HMT1	P38074	348 aa		4.08	□□□□□ -1.76
NUG1	YER006W	DUG2	P38149	878 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YBR062C	P38239	180 aa		4.08	□□□□□ -1.76
NUG1	YER006W	EXO5	P38289	585 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YBR238C	P38330	731 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	PCA1	P38360	1216 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YHL050C	P38721	697 aa		4.08	□□□□□ -1.76
NUG1	YER006W	PTC7	P38797	343 aa		4.08	□□□□□ -1.76
NUG1	YER006W	MNL1	P38888	796 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YDR089W	P38966	869 aa		4.08	□□□□□ -1.76
NUG1	YER006W	SOK1	P40317	901 aa		4.08	□□□□□ -1.76
NUG1	YER006W	SKP2	P42843	763 aa		4.08	□□□□□ -1.76
NUG1	YER006W	IRC5	P43610	853 aa		4.08	□□□□□ -1.76
NUG1	YER006W	IDS2	P46958	469 aa		4.08	□□□□□ -1.76
NUG1	YER006W	RPE1	P46969	238 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YPT11	P48559	417 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YGR237C	P50089	785 aa		4.08	□□□□□ -1.76
NUG1	YER006W	IMA1	P53051	589 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YGL108C	P53139	140 aa		4.08	□□□□□ -1.76
NUG1	YER006W	LCL3	P53153	274 aa		4.08	□□□□□ -1.76
NUG1	YER006W	IMO32	P53219	342 aa		4.08	□□□□□ -1.76
NUG1	YER006W	SSU72	P53538	206 aa	Predicted RBP	4.08	□□□□□ -1.76
NUG1	YER006W	HXT17	P53631	564 aa		4.08	□□□□□ -1.76
NUG1	YER006W	CWC24	P53769	259 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YDR476C	Q03362	224 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YDR239C	Q03780	787 aa		4.08	□□□□□ -1.76
NUG1	YER006W	TIF35	Q04067	274 aa	Known RBP	4.08	□□□□□ -1.76
NUG1	YER006W	CRR1	Q05790	422 aa		4.08	□□□□□ -1.76
NUG1	YER006W	VID22	Q05934	901 aa		4.08	□□□□□ -1.76
NUG1	YER006W	YLR345W	Q06137	509 aa		4.08	□□□□□ -1.76
NUG1	YER006W	NUT2	Q06213	157 aa		4.08	□□□□□ -1.76
NUG1	YER006W	VPS74	Q06385	345 aa		4.08	□□□□□ -1.76
NUG1	YER006W	THI3	Q07471	609 aa		4.08	□□□□□ -1.76
NUG1	YER006W	PUS9	Q12069	462 aa		4.08	□□□□□ -1.76
NUG1	YER006W	HOS1	Q12214	470 aa		4.08	□□□□□ -1.76
NUG1	YER006W	CIT1	P00890	479 aa		4.07	□□□□□ -1.76
NUG1	YER006W	RPL4A	P10664	362 aa	Known RBP	4.07	□□□□□ -1.76
NUG1	YER006W	MRP7	P12687	371 aa		4.07	□□□□□ -1.76
NUG1	YER006W	ATR1	P13090	542 aa		4.07	□□□□□ -1.76
NUG1	YER006W	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
NUG1	YER006W	AMD2	P22580	549 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YCR051W	P25631	222 aa		4.07	□□□□□ -1.76
NUG1	YER006W	HRR25	P29295	494 aa	Known RBP	4.07	□□□□□ -1.76
NUG1	YER006W	SPT14	P32363	452 aa		4.07	□□□□□ -1.76
NUG1	YER006W	TFC1	P32367	649 aa		4.07	□□□□□ -1.76
NUG1	YER006W	LAS1	P36146	502 aa	Predicted RBP	4.07	□□□□□ -1.76
NUG1	YER006W	MRPL7	P36519	292 aa		4.07	□□□□□ -1.76
NUG1	YER006W	RMD6	P39975	231 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YER010C	P40011	234 aa		4.07	□□□□□ -1.76
NUG1	YER006W	RPN3	P40016	523 aa	Known RBP	4.07	□□□□□ -1.76
NUG1	YER006W	ALG8	P40351	577 aa		4.07	□□□□□ -1.76
NUG1	YER006W	YIL161W	P40449	235 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms