RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W GMC2Q06201 188 aa5.96□□□□□ -1.46
RPT3YDR394W ATG17Q06410 417 aa5.96□□□□□ -1.46
RPT3YDR394W CRN1Q06440 651 aa5.96□□□□□ -1.46
RPT3YDR394W AVO1Q08236 1176 aa5.96□□□□□ -1.46
RPT3YDR394W HRK1Q08732 759 aaKnown RBP5.96□□□□□ -1.46
RPT3YDR394W ICT1Q12385 394 aa5.96□□□□□ -1.46
RPT3YDR394W NKP1Q12493 238 aa5.96□□□□□ -1.46
RPT3YDR394W YLR149CQ99296 730 aa5.96□□□□□ -1.46
RPT3YDR394W ATR1P13090 542 aa5.95□□□□□ -1.46
RPT3YDR394W PHO3P24031 467 aa5.95□□□□□ -1.46
RPT3YDR394W NFS1P25374 497 aa5.95□□□□□ -1.46
RPT3YDR394W COX13P32799 129 aa5.95□□□□□ -1.46
RPT3YDR394W RPS1AP33442 255 aaKnown RBP5.95□□□□□ -1.46
RPT3YDR394W STB6P36085 766 aa5.95□□□□□ -1.46
RPT3YDR394W YBL029WP38201 376 aa5.95□□□□□ -1.46
RPT3YDR394W SLM4P38247 162 aa5.95□□□□□ -1.46
RPT3YDR394W FAA3P39002 694 aa5.95□□□□□ -1.46
RPT3YDR394W PIK1P39104 1066 aa5.95□□□□□ -1.46
RPT3YDR394W VMA13P41807 478 aaKnown RBP5.95□□□□□ -1.46
RPT3YDR394W FMP32P43557 207 aa5.95□□□□□ -1.46
RPT3YDR394W SIP4P46954 829 aa5.95□□□□□ -1.46
RPT3YDR394W MPS3P47069 682 aa5.95□□□□□ -1.46
RPT3YDR394W YJR154WP47181 346 aa5.95□□□□□ -1.46
RPT3YDR394W PSP1P50896 841 aaKnown RBP5.95□□□□□ -1.46
RPT3YDR394W COG1P53079 417 aa5.95□□□□□ -1.46
RPT3YDR394W YGR053CP53234 283 aa5.95□□□□□ -1.46
RPT3YDR394W CLD1P53264 445 aa5.95□□□□□ -1.46
RPT3YDR394W SHY1P53266 389 aa5.95□□□□□ -1.46
RPT3YDR394W COQ6P53318 479 aa5.95□□□□□ -1.46
RPT3YDR394W PEX13P80667 386 aa5.95□□□□□ -1.46
RPT3YDR394W ECM9Q02202 377 aa5.95□□□□□ -1.46
RPT3YDR394W SVL3Q03088 825 aaKnown RBP5.95□□□□□ -1.46
RPT3YDR394W GOT1Q03554 138 aa5.95□□□□□ -1.46
RPT3YDR394W YDR132CQ03900 495 aa5.95□□□□□ -1.46
RPT3YDR394W RCO1Q04779 684 aa5.95□□□□□ -1.46
RPT3YDR394W SGT1Q08446 395 aa5.95□□□□□ -1.46
RPT3YDR394W YLR049CQ12110 428 aa5.95□□□□□ -1.46
RPT3YDR394W MRH1Q12117 320 aaPredicted RBP5.95□□□□□ -1.46
RPT3YDR394W MCD1Q12158 566 aa5.95□□□□□ -1.46
RPT3YDR394W CBP2P03874 630 aaPredicted RBP5.94□□□□□ -1.46
RPT3YDR394W BCY1P07278 416 aaKnown RBP5.94□□□□□ -1.46
RPT3YDR394W PHO81P17442 1178 aa5.94□□□□□ -1.46
RPT3YDR394W TYE7P33122 291 aaPredicted RBP5.94□□□□□ -1.46
RPT3YDR394W CAF4P36130 643 aa5.94□□□□□ -1.46
RPT3YDR394W YBR241CP38142 488 aa5.94□□□□□ -1.46
RPT3YDR394W GND1P38720 489 aaKnown RBP5.94□□□□□ -1.46
RPT3YDR394W EFM1P38732 585 aa5.94□□□□□ -1.46
RPT3YDR394W DSS1P39112 969 aa5.94□□□□□ -1.46
RPT3YDR394W MET18P40469 1032 aa5.94□□□□□ -1.46
RPT3YDR394W GTS1P40956 396 aa5.94□□□□□ -1.46
RPT3YDR394W IME4P41833 600 aa5.94□□□□□ -1.46
RPT3YDR394W GPI1P53306 609 aa5.94□□□□□ -1.46
RPT3YDR394W ASI2P53895 289 aa5.94□□□□□ -1.46
RPT3YDR394W REG1Q00816 1014 aa5.94□□□□□ -1.46
RPT3YDR394W RPN4Q03465 531 aa5.94□□□□□ -1.46
RPT3YDR394W TAF12Q03761 539 aa5.94□□□□□ -1.46
RPT3YDR394W BSP1Q06604 576 aa5.94□□□□□ -1.46
RPT3YDR394W GPB1Q08886 897 aa5.94□□□□□ -1.46
RPT3YDR394W PEX11Q12462 236 aa5.94□□□□□ -1.46
RPT3YDR394W PRC1P00729 532 aa5.93□□□□□ -1.46
RPT3YDR394W COS2P0CX12 379 aa5.93□□□□□ -1.46
RPT3YDR394W COS3P0CX13 379 aa5.93□□□□□ -1.46
RPT3YDR394W SST2P11972 698 aaKnown RBP5.93□□□□□ -1.46
RPT3YDR394W TOP3P13099 656 aa5.93□□□□□ -1.46
RPT3YDR394W SEC63P14906 663 aa5.93□□□□□ -1.46
RPT3YDR394W UGA1P17649 471 aa5.93□□□□□ -1.46
RPT3YDR394W CCA1P21269 546 aa5.93□□□□□ -1.46
RPT3YDR394W CAD1P24813 409 aaKnown RBP5.93□□□□□ -1.46
RPT3YDR394W RBK1P25332 333 aa5.93□□□□□ -1.46
RPT3YDR394W RVS161P25343 265 aaKnown RBP5.93□□□□□ -1.46
RPT3YDR394W SGF29P25554 259 aa5.93□□□□□ -1.46
RPT3YDR394W SPB1P25582 841 aaPredicted RBP5.93□□□□□ -1.46
RPT3YDR394W NGG1P32494 702 aa5.93□□□□□ -1.46
RPT3YDR394W YKL100CP34248 587 aa5.93□□□□□ -1.46
RPT3YDR394W NNK1P36003 928 aa5.93□□□□□ -1.46
RPT3YDR394W ARP1P38696 384 aa5.93□□□□□ -1.46
RPT3YDR394W FAA2P39518 744 aa5.93□□□□□ -1.46
RPT3YDR394W EXO1P39875 702 aa5.93□□□□□ -1.46
RPT3YDR394W YIL161WP40449 235 aaKnown RBP5.93□□□□□ -1.46
RPT3YDR394W UBP7P40453 1071 aa5.93□□□□□ -1.46
RPT3YDR394W FKH2P41813 862 aa5.93□□□□□ -1.46
RPT3YDR394W GCD10P41814 478 aa5.93□□□□□ -1.46
RPT3YDR394W YRB1P41920 201 aaKnown RBP5.93□□□□□ -1.46
RPT3YDR394W COS4P43542 379 aa5.93□□□□□ -1.46
RPT3YDR394W AGP3P43548 558 aa5.93□□□□□ -1.46
RPT3YDR394W RSC8P43609 557 aaKnown RBP5.93□□□□□ -1.46
RPT3YDR394W DSL1P53847 754 aa5.93□□□□□ -1.46
RPT3YDR394W YNL143CP53908 130 aa5.93□□□□□ -1.46
RPT3YDR394W YNL033WP53964 284 aa5.93□□□□□ -1.46
RPT3YDR394W YNL019CP53975 284 aa5.93□□□□□ -1.46
RPT3YDR394W ORC3P54790 616 aa5.93□□□□□ -1.46
RPT3YDR394W TMA20P89886 181 aaPredicted RBP5.93□□□□□ -1.46
RPT3YDR394W YPL014WQ02606 381 aa5.93□□□□□ -1.46
RPT3YDR394W RIF2Q06208 395 aa5.93□□□□□ -1.46
RPT3YDR394W VAM6Q07468 1049 aa5.93□□□□□ -1.46
RPT3YDR394W YPQ1Q12010 308 aa5.93□□□□□ -1.46
RPT3YDR394W ULA1Q12059 462 aa5.93□□□□□ -1.46
RPT3YDR394W YVC1Q12324 675 aa5.93□□□□□ -1.46
RPT3YDR394W SPT3P06844 337 aa5.92□□□□□ -1.46
RPT3YDR394W SNF4P12904 322 aa5.92□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms