RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W CRG1P38892 291 aaRIP-Chip data1.36□□□□□ -2.19not detected
MSN5YDR335W YDR089WP38966 869 aa1.36□□□□□ -2.19
MSN5YDR335W SLZ1P40167 298 aa1.36□□□□□ -2.19
MSN5YDR335W BST1P43571 1029 aa1.36□□□□□ -2.19
MSN5YDR335W YGR126WP53274 230 aa1.36□□□□□ -2.19
MSN5YDR335W MAL12P53341 584 aa1.36□□□□□ -2.19
MSN5YDR335W YNL050CP53952 270 aa1.36□□□□□ -2.19
MSN5YDR335W KAP120Q02932 1032 aa1.36□□□□□ -2.19
MSN5YDR335W YDR109CQ04585 715 aa1.36□□□□□ -2.19
MSN5YDR335W DCS1Q06151 350 aa1.36□□□□□ -2.19
MSN5YDR335W YSH1Q06224 779 aaPredicted RBP1.36□□□□□ -2.19
MSN5YDR335W CRN1Q06440 651 aa1.36□□□□□ -2.19
MSN5YDR335W YDL057WQ07379 328 aa1.36□□□□□ -2.19
MSN5YDR335W PEX19Q07418 342 aa1.36□□□□□ -2.19
MSN5YDR335W THI21Q08975 551 aa1.36□□□□□ -2.19
MSN5YDR335W YRA1Q12159 226 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W APC2Q12440 853 aa1.36□□□□□ -2.19
MSN5YDR335W AI5_ALPHAQ9ZZX1 630 aa1.36□□□□□ -2.19
MSN5YDR335W TUS1Q06412 1307 aa1.36□□□□□ -2.19
MSN5YDR335W SKI3P17883 1432 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W MF(ALPHA)1P01149 165 aa1.35□□□□□ -2.19
MSN5YDR335W ARG80P07249 177 aa1.35□□□□□ -2.19
MSN5YDR335W CBP1P07252 654 aa1.35□□□□□ -2.19
MSN5YDR335W SCH9P11792 824 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W KSS1P14681 368 aa1.35□□□□□ -2.19
MSN5YDR335W ADE2P21264 571 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W MCM4P30665 933 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W MF(ALPHA)2P32435 120 aa1.35□□□□□ -2.19
MSN5YDR335W SRB4P32569 687 aa1.35□□□□□ -2.19
MSN5YDR335W DSS4P32601 143 aa1.35□□□□□ -2.19
MSN5YDR335W UGP1P32861 499 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W KES1P35844 434 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W KEL1P38853 1164 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W YJL193WP39542 402 aa1.35□□□□□ -2.19
MSN5YDR335W FTR1P40088 404 aa1.35□□□□□ -2.19
MSN5YDR335W YGR149WP48236 432 aa1.35□□□□□ -2.19
MSN5YDR335W VPS4P52917 437 aa1.35□□□□□ -2.19
MSN5YDR335W MND1P53102 219 aa1.35□□□□□ -2.19
MSN5YDR335W ERV25P54837 211 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W INA17Q02888 182 aa1.35□□□□□ -2.19
MSN5YDR335W CTK1Q03957 528 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W ECM18Q04623 453 aa1.35□□□□□ -2.19
MSN5YDR335W ADE13Q05911 482 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W SSQ1Q05931 657 aaPredicted RBP1.35□□□□□ -2.19
MSN5YDR335W BSC6Q08280 497 aa1.35□□□□□ -2.19
MSN5YDR335W NRT1Q08485 598 aa1.35□□□□□ -2.19
MSN5YDR335W FMP40Q08968 688 aaPredicted RBP1.35□□□□□ -2.19
MSN5YDR335W YPQ1Q12010 308 aa1.35□□□□□ -2.19
MSN5YDR335W RAD9P14737 1309 aa1.35□□□□□ -2.19
MSN5YDR335W PRE4P30657 266 aa1.35□□□□□ -2.19
MSN5YDR335W BMH2P34730 273 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W YKT6P36015 200 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W UIP5P36137 443 aa1.35□□□□□ -2.19
MSN5YDR335W SSP120P39931 234 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W YJL132WP47014 750 aa1.35□□□□□ -2.19
MSN5YDR335W TRF5P48561 642 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W PHO23P50947 330 aa1.35□□□□□ -2.19
MSN5YDR335W SNZ1Q03148 297 aa1.35□□□□□ -2.19
MSN5YDR335W YAP6Q03935 383 aa1.35□□□□□ -2.19
MSN5YDR335W RPN9Q04062 393 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W YMR310CQ04867 317 aaPredicted RBP1.35□□□□□ -2.19
MSN5YDR335W TRI1Q05024 226 aa1.35□□□□□ -2.19
MSN5YDR335W RRP45Q05636 305 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W ECM22Q05958 814 aaPredicted RBP1.35□□□□□ -2.19
MSN5YDR335W CRT10Q08226 957 aa1.35□□□□□ -2.19
MSN5YDR335W YPR1Q12458 312 aa1.35□□□□□ -2.19
MSN5YDR335W ILV5P06168 395 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W CDC6P09119 513 aa1.35□□□□□ -2.19
MSN5YDR335W RNR1P21524 888 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W YCR016WP25617 290 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W RAD14P28519 371 aa1.35□□□□□ -2.19
MSN5YDR335W HMX1P32339 317 aa1.35□□□□□ -2.19
MSN5YDR335W ATP11P32453 318 aa1.35□□□□□ -2.19
MSN5YDR335W MGM101P32787 269 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W YPT7P32939 208 aa1.35□□□□□ -2.19
MSN5YDR335W LHS1P36016 881 aa1.35□□□□□ -2.19
MSN5YDR335W PIM1P36775 1133 aa1.35□□□□□ -2.19
MSN5YDR335W SER3P40054 469 aa1.35□□□□□ -2.19
MSN5YDR335W DSE1P40077 573 aa1.35□□□□□ -2.19
MSN5YDR335W NAS2P40555 220 aa1.35□□□□□ -2.19
MSN5YDR335W TWF1P53250 332 aa1.35□□□□□ -2.19
MSN5YDR335W RPT4P53549 437 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W INN1P53901 409 aa1.35□□□□□ -2.19
MSN5YDR335W APM1Q00776 475 aaPredicted RBP1.35□□□□□ -2.19
MSN5YDR335W REC102Q02721 264 aa1.35□□□□□ -2.19
MSN5YDR335W MRP51Q02950 344 aa1.35□□□□□ -2.19
MSN5YDR335W NGL2Q03264 515 aaKnown RBP1.35□□□□□ -2.19
MSN5YDR335W TRS23Q03784 219 aa1.35□□□□□ -2.19
MSN5YDR335W RPC11Q04307 110 aaPredicted RBP1.35□□□□□ -2.19
MSN5YDR335W RCO1Q04779 684 aa1.35□□□□□ -2.19
MSN5YDR335W ADY4Q05955 493 aa1.35□□□□□ -2.19
MSN5YDR335W BCP1Q06338 283 aa1.35□□□□□ -2.19
MSN5YDR335W YLL007CQ07799 665 aa1.35□□□□□ -2.19
MSN5YDR335W AHC1Q12433 566 aa1.35□□□□□ -2.19
MSN5YDR335W GAL4P04386 881 aa1.34□□□□□ -2.19
MSN5YDR335W HXK2P04807 486 aaKnown RBP1.34□□□□□ -2.19
MSN5YDR335W RAD7P06779 565 aa1.34□□□□□ -2.19
MSN5YDR335W DFR1P07807 211 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
MSN5YDR335W RPB2P08518 1224 aaKnown RBP1.34□□□□□ -2.19
MSN5YDR335W CBF1P17106 351 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms