RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C GWT1P47026 490 aa1.77□□□□□ -2.13
CSN9YDR179C DSD1P53095 428 aa1.77□□□□□ -2.13
CSN9YDR179C SHY1P53266 389 aa1.77□□□□□ -2.13
CSN9YDR179C TMS1Q12116 473 aa1.77□□□□□ -2.13
CSN9YDR179C RVS161P25343 265 aaKnown RBP1.76□□□□□ -2.13
CSN9YDR179C IMG1P25626 169 aa1.76□□□□□ -2.13
CSN9YDR179C PSY4P38193 441 aa1.76□□□□□ -2.13
CSN9YDR179C ALK1P43633 760 aaKnown RBP1.76□□□□□ -2.13
CSN9YDR179C TIS11P47977 285 aa1.76□□□□□ -2.13
CSN9YDR179C APT1P49435 187 aaKnown RBP1.76□□□□□ -2.13
CSN9YDR179C GPI1P53306 609 aa1.76□□□□□ -2.13
CSN9YDR179C BUD32P53323 261 aa1.76□□□□□ -2.13
CSN9YDR179C IBD2P53892 351 aa1.76□□□□□ -2.13
CSN9YDR179C VID22Q05934 901 aa1.76□□□□□ -2.13
CSN9YDR179C YOR365CQ08844 703 aa1.76□□□□□ -2.13
CSN9YDR179C TRM8Q12009 286 aa1.76□□□□□ -2.13
CSN9YDR179C BRR1Q99177 341 aaPredicted RBP1.76□□□□□ -2.13
CSN9YDR179C SUC2P00724 532 aa1.75□□□□□ -2.13
CSN9YDR179C MF(ALPHA)1P01149 165 aa1.75□□□□□ -2.13
CSN9YDR179C SNF1P06782 633 aaKnown RBP1.75□□□□□ -2.13
CSN9YDR179C SGV1P23293 657 aaKnown RBP1.75□□□□□ -2.13
CSN9YDR179C SYN8P31377 255 aa1.75□□□□□ -2.13
CSN9YDR179C SSE2P32590 693 aaKnown RBP1.75□□□□□ -2.13
CSN9YDR179C YBR144CP34215 104 aa1.75□□□□□ -2.13
CSN9YDR179C HCS1P34243 683 aa1.75□□□□□ -2.13
CSN9YDR179C RSM22P36056 628 aa1.75□□□□□ -2.13
CSN9YDR179C YER010CP40011 234 aa1.75□□□□□ -2.13
CSN9YDR179C KAP123P40069 1113 aaKnown RBP1.75□□□□□ -2.13
CSN9YDR179C TMA108P40462 946 aa1.75□□□□□ -2.13
CSN9YDR179C YIL067CP40514 678 aa1.75□□□□□ -2.13
CSN9YDR179C SAP185P40856 1058 aa1.75□□□□□ -2.13
CSN9YDR179C RRT6P53117 311 aaPredicted RBP1.75□□□□□ -2.13
CSN9YDR179C PIR3Q03180 325 aa1.75□□□□□ -2.13
CSN9YDR179C RIX7Q07844 837 aaKnown RBP1.75□□□□□ -2.13
CSN9YDR179C YLR108CQ12259 485 aa1.75□□□□□ -2.13
CSN9YDR179C CLN3P13365 580 aa1.74□□□□□ -2.13
CSN9YDR179C DBF20P32328 564 aa1.74□□□□□ -2.13
CSN9YDR179C MID2P36027 376 aa1.74□□□□□ -2.13
CSN9YDR179C NAT2P37293 288 aa1.74□□□□□ -2.13
CSN9YDR179C SWD3P38123 315 aa1.74□□□□□ -2.13
CSN9YDR179C ARC1P46672 376 aaKnown RBP1.74□□□□□ -2.13
CSN9YDR179C BUD22Q04347 519 aaKnown RBP1.74□□□□□ -2.13
CSN9YDR179C RBS1Q05672 457 aaKnown RBP1.74□□□□□ -2.13
CSN9YDR179C PHO92Q06390 306 aa1.74□□□□□ -2.13
CSN9YDR179C YDL057WQ07379 328 aa1.74□□□□□ -2.13
CSN9YDR179C NCE102Q12207 173 aaRIP-Chip data1.74□□□□□ -2.13not detected
CSN9YDR179C RBD2Q12270 262 aa1.74□□□□□ -2.13
CSN9YDR179C WTM1Q12363 437 aaKnown RBP1.74□□□□□ -2.13
CSN9YDR179C RAD52P06778 471 aaKnown RBP1.73□□□□□ -2.13
CSN9YDR179C APA1P16550 321 aaKnown RBP1.73□□□□□ -2.13
CSN9YDR179C PET123P17558 318 aa1.73□□□□□ -2.13
CSN9YDR179C CPR4P25334 318 aa1.73□□□□□ -2.13
CSN9YDR179C NDI1P32340 513 aa1.73□□□□□ -2.13
CSN9YDR179C SLC1P33333 303 aa1.73□□□□□ -2.13
CSN9YDR179C MFT1P33441 392 aaKnown RBP1.73□□□□□ -2.13
CSN9YDR179C SHP1P34223 423 aa1.73□□□□□ -2.13
CSN9YDR179C OGG1P53397 376 aaPredicted RBP1.73□□□□□ -2.13
CSN9YDR179C BSC5P53755 489 aa1.73□□□□□ -2.13
CSN9YDR179C MSC1Q03104 513 aa1.73□□□□□ -2.13
CSN9YDR179C TSR1Q07381 788 aaKnown RBP1.73□□□□□ -2.13
CSN9YDR179C FMP40Q08968 688 aaPredicted RBP1.73□□□□□ -2.13
CSN9YDR179C HSH49Q99181 213 aaPredicted RBP1.73□□□□□ -2.13
CSN9YDR179C YOL087CQ99247 1116 aa1.73□□□□□ -2.13
CSN9YDR179C CDC24P11433 854 aaPredicted RBP1.72□□□□□ -2.13
CSN9YDR179C GLK1P17709 500 aaKnown RBP1.72□□□□□ -2.13
CSN9YDR179C SPS22P25380 463 aa1.72□□□□□ -2.13
CSN9YDR179C YIH1P25637 258 aa1.72□□□□□ -2.13
CSN9YDR179C PAP1P29468 568 aaKnown RBP1.72□□□□□ -2.13
CSN9YDR179C AUR1P36107 401 aaPredicted RBP1.72□□□□□ -2.13
CSN9YDR179C DUG2P38149 878 aa1.72□□□□□ -2.13
CSN9YDR179C BNA4P38169 460 aa1.72□□□□□ -2.13
CSN9YDR179C BNA1P47096 177 aa1.72□□□□□ -2.13
CSN9YDR179C URB2P47108 1174 aa1.72□□□□□ -2.13
CSN9YDR179C TOF1P53840 1238 aa1.72□□□□□ -2.13
CSN9YDR179C PEX25Q02969 394 aa1.72□□□□□ -2.13
CSN9YDR179C RSN1Q03516 953 aa1.72□□□□□ -2.13
CSN9YDR179C LUC7Q07508 261 aaPredicted RBP1.72□□□□□ -2.13
CSN9YDR179C THP1Q08231 455 aa1.72□□□□□ -2.13
CSN9YDR179C ADH2P00331 348 aaKnown RBP1.71□□□□□ -2.14
CSN9YDR179C PEP4P07267 405 aaKnown RBP1.71□□□□□ -2.14
CSN9YDR179C ARD1P07347 238 aaPredicted RBP1.71□□□□□ -2.14
CSN9YDR179C ART10P18634 518 aaKnown RBP1.71□□□□□ -2.14
CSN9YDR179C KGD1P20967 1014 aaKnown RBP1.71□□□□□ -2.14
CSN9YDR179C DAL2P25335 343 aa1.71□□□□□ -2.14
CSN9YDR179C CDC60P26637 1090 aaKnown RBP1.71□□□□□ -2.14
CSN9YDR179C MAL33P38157 468 aa1.71□□□□□ -2.14
CSN9YDR179C MRP21P38175 177 aa1.71□□□□□ -2.14
CSN9YDR179C FAU1P40099 211 aa1.71□□□□□ -2.14
CSN9YDR179C SIP4P46954 829 aa1.71□□□□□ -2.14
CSN9YDR179C HAL1Q01766 294 aa1.71□□□□□ -2.14
CSN9YDR179C TOF2Q02208 771 aa1.71□□□□□ -2.14
CSN9YDR179C HER2Q03557 464 aa1.71□□□□□ -2.14
CSN9YDR179C SNO4Q04902 237 aa1.71□□□□□ -2.14
CSN9YDR179C HRI1Q05905 244 aaKnown RBP1.71□□□□□ -2.14
CSN9YDR179C MRPL35Q06678 367 aa1.71□□□□□ -2.14
CSN9YDR179C HSP33Q08914 237 aaKnown RBP1.71□□□□□ -2.14
CSN9YDR179C HSP32Q08992 237 aa1.71□□□□□ -2.14
CSN9YDR179C CFT2Q12102 859 aaPredicted RBP1.71□□□□□ -2.14
CSN9YDR179C SKM1Q12469 655 aa1.71□□□□□ -2.14
CSN9YDR179C HSC82P15108 705 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms