RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	YDR239C	Q03780	787 aa		3.2	□□□□□ -1.9
SLU7	YDR088C	TAF11	Q04226	346 aa		3.2	□□□□□ -1.9
SLU7	YDR088C	YLR281C	Q05863	155 aa		3.2	□□□□□ -1.9
SLU7	YDR088C	MRD1	Q06106	887 aa	Known RBP	3.2	□□□□□ -1.9
SLU7	YDR088C	RTP1	Q12751	981 aa		3.2	□□□□□ -1.9
SLU7	YDR088C	PEP5	P12868	1029 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	CDC23	P16522	626 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	SUI2	P20459	304 aa	Known RBP	3.19	□□□□□ -1.9
SLU7	YDR088C	ROX1	P25042	368 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	RPN2	P32565	945 aa	Known RBP	3.19	□□□□□ -1.9
SLU7	YDR088C	YME1	P32795	747 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	TRS65	P32893	560 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	ECM15	P35195	104 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	TIF4631	P39935	952 aa	Known RBP	3.19	□□□□□ -1.9
SLU7	YDR088C	ARF3	P40994	183 aa	RIP-Chip data	3.19	□□□□□ -1.9	not detected
SLU7	YDR088C	CAF130	P53280	1122 aa	Predicted RBP	3.19	□□□□□ -1.9
SLU7	YDR088C	TOF2	Q02208	771 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	FIN1	Q03898	291 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	CDC45	Q08032	650 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	THI20	Q08224	551 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	THP1	Q08231	455 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	ARP6	Q12509	438 aa		3.19	□□□□□ -1.9
SLU7	YDR088C	COR1	P07256	457 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	CKA1	P15790	372 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	MRE11	P32829	692 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	MSN2	P33748	704 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	MIC60	P36112	540 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	RKM3	P38222	552 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	MUM2	P38236	366 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	BZZ1	P38822	633 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	DHH1	P39517	506 aa	Known RBP	3.18	□□□□□ -1.9
SLU7	YDR088C	VPS52	P39904	641 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	YJR154W	P47181	346 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	JJJ1	P53863	590 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	SAM50	P53969	484 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	HEF3	P53978	1044 aa	Known RBP	3.18	□□□□□ -1.9
SLU7	YDR088C	TIP41	Q12199	356 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	GRX6	Q12438	231 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	PGA3	Q12746	312 aa	Known RBP	3.18	□□□□□ -1.9
SLU7	YDR088C	YDL007C-A	Q2V2Q0	85 aa		3.18	□□□□□ -1.9
SLU7	YDR088C	YML133C	Q03099	1374 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	YLL067C	Q07888	1374 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	YLL066C	Q99208	1374 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	SUC2	P00724	532 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	RED1	P14291	827 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	PRP2	P20095	876 aa	Predicted RBP	3.17	□□□□□ -1.9
SLU7	YDR088C	PMT1	P33775	817 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	SHP1	P34223	423 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	RIM2	P38127	377 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	BNA4	P38169	460 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	TCM62	P38228	572 aa	Known RBP	3.17	□□□□□ -1.9
SLU7	YDR088C	ALK1	P43633	760 aa	Known RBP	3.17	□□□□□ -1.9
SLU7	YDR088C	ROK1	P45818	564 aa	Predicted RBP	3.17	□□□□□ -1.9
SLU7	YDR088C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
SLU7	YDR088C	KTR5	P53966	522 aa	Predicted RBP	3.17	□□□□□ -1.9
SLU7	YDR088C	PDS5	Q04264	1277 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	RIM20	Q12033	661 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	ATG29	Q12092	213 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	RTN2	Q12443	393 aa		3.17	□□□□□ -1.9
SLU7	YDR088C	MRS3	P10566	314 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	APE1	P14904	514 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	SEC62	P21825	274 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	ERG3	P32353	365 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	FRE1	P32791	686 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	VPS17	P32913	551 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	VID24	P38263	362 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	OSH3	P38713	996 aa	Known RBP	3.16	□□□□□ -1.9
SLU7	YDR088C	ALT2	P52892	507 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	CUL3	P53202	744 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	TWF1	P53250	332 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	RLI1	Q03195	608 aa	Known RBP	3.16	□□□□□ -1.9
SLU7	YDR088C	SLD5	Q03406	294 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	GLO2	Q05584	274 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	SEC39	Q12745	709 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	YOL159C-A	Q3E769	90 aa		3.16	□□□□□ -1.9
SLU7	YDR088C	MES1	P00958	751 aa	Known RBP	3.15	□□□□□ -1.91
SLU7	YDR088C	AMD1	P15274	810 aa	Known RBP	3.15	□□□□□ -1.91
SLU7	YDR088C	BUD14	P27637	709 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	PAP1	P29468	568 aa	Known RBP	3.15	□□□□□ -1.91
SLU7	YDR088C	ATS1	P31386	333 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	ATP11	P32453	318 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	DUG2	P38149	878 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	UTP9	P38882	575 aa	Known RBP	3.15	□□□□□ -1.91
SLU7	YDR088C	SMF1	P38925	575 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	MBB1	P39534	108 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	YMR147W	P40218	223 aa	Known RBP	3.15	□□□□□ -1.91
SLU7	YDR088C	YJL068C	P40363	299 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	ZPR1	P53303	486 aa	Known RBP	3.15	□□□□□ -1.91
SLU7	YDR088C	SLG1	P54867	378 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	IVY1	Q04934	453 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	PHO92	Q06390	306 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	DAP1	Q12091	152 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	RKM5	Q12367	367 aa		3.15	□□□□□ -1.91
SLU7	YDR088C	RAV1	P47104	1357 aa		3.14	□□□□□ -1.91
SLU7	YDR088C	RPL31B	P0C2H9	113 aa	Known RBP	3.14	□□□□□ -1.91
SLU7	YDR088C	SIP2	P34164	415 aa	Known RBP	3.14	□□□□□ -1.91
SLU7	YDR088C	SAS3	P34218	831 aa		3.14	□□□□□ -1.91
SLU7	YDR088C	CMC1	P36064	111 aa		3.14	□□□□□ -1.91
SLU7	YDR088C	RRP3	P38712	501 aa	Known RBP	3.14	□□□□□ -1.91
SLU7	YDR088C	CSM2	P40465	213 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms