RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C SUN4P53616 420 aa5.08□□□□□ -1.6
SCM3YDL139C FRE4P53746 719 aa5.08□□□□□ -1.6
SCM3YDL139C MTD1Q02046 320 aaKnown RBP5.08□□□□□ -1.6
SCM3YDL139C PIR1Q03178 341 aa5.08□□□□□ -1.6
SCM3YDL139C YMR155WQ03795 547 aa5.08□□□□□ -1.6
SCM3YDL139C YDR131CQ03899 556 aa5.08□□□□□ -1.6
SCM3YDL139C YHM2Q04013 314 aa5.08□□□□□ -1.6
SCM3YDL139C CDC123Q05791 360 aa5.08□□□□□ -1.6
SCM3YDL139C UBX3Q12229 455 aa5.08□□□□□ -1.6
SCM3YDL139C NTO1Q12311 748 aa5.08□□□□□ -1.6
SCM3YDL139C PNS1Q12412 539 aa5.08□□□□□ -1.6
SCM3YDL139C YPT6Q99260 215 aa5.08□□□□□ -1.6
SCM3YDL139C YLR415CO13578 112 aa5.07□□□□□ -1.6
SCM3YDL139C YPR089WO13585 888 aa5.07□□□□□ -1.6
SCM3YDL139C PHO5P00635 467 aa5.07□□□□□ -1.6
SCM3YDL139C SIR1P21691 654 aa5.07□□□□□ -1.6
SCM3YDL139C AAT2P23542 418 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C PPH22P23595 377 aa5.07□□□□□ -1.6
SCM3YDL139C RBK1P25332 333 aa5.07□□□□□ -1.6
SCM3YDL139C YCR099CP25657 155 aa5.07□□□□□ -1.6
SCM3YDL139C RAD14P28519 371 aa5.07□□□□□ -1.6
SCM3YDL139C SWE1P32944 819 aa5.07□□□□□ -1.6
SCM3YDL139C ECM13P38195 257 aa5.07□□□□□ -1.6
SCM3YDL139C SHE3P38272 425 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C SRP68P38687 599 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C SFB3P38810 929 aa5.07□□□□□ -1.6
SCM3YDL139C REV7P38927 245 aa5.07□□□□□ -1.6
SCM3YDL139C SEC31P38968 1273 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C HPM1P40481 377 aa5.07□□□□□ -1.6
SCM3YDL139C DPH1P40487 425 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C PRM2P40534 656 aa5.07□□□□□ -1.6
SCM3YDL139C IML2P47031 731 aa5.07□□□□□ -1.6
SCM3YDL139C RNR4P49723 345 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C STR3P53101 465 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C VPS9P54787 451 aa5.07□□□□□ -1.6
SCM3YDL139C AAT1Q01802 451 aa5.07□□□□□ -1.6
SCM3YDL139C TRS31Q03337 283 aa5.07□□□□□ -1.6
SCM3YDL139C SGO1Q08490 590 aa5.07□□□□□ -1.6
SCM3YDL139C SLF1Q12034 447 aaKnown RBP5.07□□□□□ -1.6
SCM3YDL139C STT4P37297 1900 aa5.06□□□□□ -1.6
SCM3YDL139C HIS1P00498 297 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C SEC53P07283 254 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C NSP1P14907 823 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C ART10P18634 518 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C YAP1P19880 650 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C SAN1P22470 610 aa5.06□□□□□ -1.6
SCM3YDL139C CDC10P25342 322 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C SNT1P25357 1226 aa5.06□□□□□ -1.6
SCM3YDL139C NIP1P32497 812 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C ASK1P35734 292 aa5.06□□□□□ -1.6
SCM3YDL139C KDX1P36005 433 aa5.06□□□□□ -1.6
SCM3YDL139C RPC37P36121 282 aa5.06□□□□□ -1.6
SCM3YDL139C KAP104P38217 918 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C FAT1P38225 669 aa5.06□□□□□ -1.6
SCM3YDL139C FZO1P38297 855 aa5.06□□□□□ -1.6
SCM3YDL139C SIC1P38634 284 aa5.06□□□□□ -1.6
SCM3YDL139C DLD2P46681 530 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C MSE1P48525 536 aa5.06□□□□□ -1.6
SCM3YDL139C EXG2P52911 562 aa5.06□□□□□ -1.6
SCM3YDL139C SAP4P53036 818 aa5.06□□□□□ -1.6
SCM3YDL139C LSC1P53598 329 aaKnown RBP5.06□□□□□ -1.6
SCM3YDL139C RNT1Q02555 471 aa5.06□□□□□ -1.6
SCM3YDL139C GAS3Q03655 524 aa5.06□□□□□ -1.6
SCM3YDL139C FMN1Q03778 218 aa5.06□□□□□ -1.6
SCM3YDL139C TVP15Q03860 143 aa5.06□□□□□ -1.6
SCM3YDL139C ASA1Q06822 443 aa5.06□□□□□ -1.6
SCM3YDL139C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SCM3YDL139C TAF10Q12030 206 aa5.06□□□□□ -1.6
SCM3YDL139C PUS9Q12069 462 aa5.06□□□□□ -1.6
SCM3YDL139C LAS17Q12446 633 aa5.06□□□□□ -1.6
SCM3YDL139C TAO3P40468 2376 aa5.05□□□□□ -1.6
SCM3YDL139C SGF29P25554 259 aa5.05□□□□□ -1.6
SCM3YDL139C DCG1P32460 244 aa5.05□□□□□ -1.6
SCM3YDL139C PTM1P32857 523 aa5.05□□□□□ -1.6
SCM3YDL139C RPP1P38786 293 aa5.05□□□□□ -1.6
SCM3YDL139C BEM4P39011 633 aa5.05□□□□□ -1.6
SCM3YDL139C PXA1P41909 870 aa5.05□□□□□ -1.6
SCM3YDL139C GAT1P43574 510 aa5.05□□□□□ -1.6
SCM3YDL139C FAR3P46671 204 aa5.05□□□□□ -1.6
SCM3YDL139C YNL247WP53852 767 aaKnown RBP5.05□□□□□ -1.6
SCM3YDL139C YNL034WP53963 612 aa5.05□□□□□ -1.6
SCM3YDL139C GOT1Q03554 138 aa5.05□□□□□ -1.6
SCM3YDL139C TAF12Q03761 539 aa5.05□□□□□ -1.6
SCM3YDL139C RIF2Q06208 395 aa5.05□□□□□ -1.6
SCM3YDL139C YEH2Q07950 538 aa5.05□□□□□ -1.6
SCM3YDL139C YLR046CQ12253 270 aa5.05□□□□□ -1.6
SCM3YDL139C SPE4Q12455 300 aa5.05□□□□□ -1.6
SCM3YDL139C YKL018C-AQ3E7A7 99 aa5.05□□□□□ -1.6
SCM3YDL139C RGS2Q99188 309 aa5.05□□□□□ -1.6
SCM3YDL139C ATP1P07251 545 aaKnown RBP5.04□□□□□ -1.6
SCM3YDL139C GCY1P14065 312 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SCM3YDL139C ABF1P14164 731 aa5.04□□□□□ -1.6
SCM3YDL139C MRPL25P23369 157 aa5.04□□□□□ -1.6
SCM3YDL139C NGG1P32494 702 aa5.04□□□□□ -1.6
SCM3YDL139C COY1P34237 679 aa5.04□□□□□ -1.6
SCM3YDL139C CTF13P35203 478 aa5.04□□□□□ -1.6
SCM3YDL139C NUP120P35729 1037 aa5.04□□□□□ -1.6
SCM3YDL139C NUP60P39705 539 aa5.04□□□□□ -1.6
SCM3YDL139C JHD1P40034 492 aa5.04□□□□□ -1.6
SCM3YDL139C SEC27P41811 889 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms