RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W FMP10P40098 244 aa2.03□□□□□ -2.09
USO1YDL058W SWM2P40342 146 aa2.03□□□□□ -2.09
USO1YDL058W AIM20P40451 204 aa2.03□□□□□ -2.09
USO1YDL058W ASG1P40467 964 aa2.03□□□□□ -2.09
USO1YDL058W URM1P40554 99 aaPredicted RBP2.03□□□□□ -2.09
USO1YDL058W ACS2P52910 683 aaKnown RBP2.03□□□□□ -2.09
USO1YDL058W YGR125WP53273 1036 aa2.03□□□□□ -2.09
USO1YDL058W EEB1Q02891 456 aa2.03□□□□□ -2.09
USO1YDL058W ERO1Q03103 563 aa2.03□□□□□ -2.09
USO1YDL058W NHP10Q03435 203 aa2.03□□□□□ -2.09
USO1YDL058W WAR1Q03631 944 aa2.03□□□□□ -2.09
USO1YDL058W MSS11Q03825 758 aa2.03□□□□□ -2.09
USO1YDL058W MTQ2Q03920 221 aaPredicted RBP2.03□□□□□ -2.09
USO1YDL058W EMI2Q04409 500 aaKnown RBP2.03□□□□□ -2.09
USO1YDL058W GPI13Q07830 1017 aa2.03□□□□□ -2.09
USO1YDL058W DIA2Q08496 732 aaPredicted RBP2.03□□□□□ -2.09
USO1YDL058W YDR061WQ12298 539 aa2.03□□□□□ -2.09
USO1YDL058W GPR1Q12361 961 aa2.03□□□□□ -2.09
USO1YDL058W TRM10Q12400 293 aa2.03□□□□□ -2.09
USO1YDL058W NSI1Q12457 570 aa2.03□□□□□ -2.09
USO1YDL058W TMA17Q12513 150 aa2.03□□□□□ -2.09
USO1YDL058W RRP12Q12754 1228 aaKnown RBP2.03□□□□□ -2.09
USO1YDL058W ATP6P00854 259 aa2.02□□□□□ -2.09
USO1YDL058W HXK2P04807 486 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W SPE1P08432 466 aa2.02□□□□□ -2.09
USO1YDL058W TCP1P12612 559 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W RSR1P13856 272 aa2.02□□□□□ -2.09
USO1YDL058W HYP2P23301 157 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W CPR4P25334 318 aa2.02□□□□□ -2.09
USO1YDL058W SED4P25365 1065 aa2.02□□□□□ -2.09
USO1YDL058W NAB2P32505 525 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
USO1YDL058W SIP1P32578 815 aa2.02□□□□□ -2.09
USO1YDL058W APL3P38065 1025 aa2.02□□□□□ -2.09
USO1YDL058W POP8P38208 133 aa2.02□□□□□ -2.09
USO1YDL058W AXL2P38928 823 aa2.02□□□□□ -2.09
USO1YDL058W AIM14P53109 570 aa2.02□□□□□ -2.09
USO1YDL058W YGR266WP53326 701 aa2.02□□□□□ -2.09
USO1YDL058W ERG13P54839 491 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W SAE3P89114 91 aa2.02□□□□□ -2.09
USO1YDL058W SED5Q01590 340 aa2.02□□□□□ -2.09
USO1YDL058W CCE1Q03702 353 aa2.02□□□□□ -2.09
USO1YDL058W VHS1Q03785 461 aa2.02□□□□□ -2.09
USO1YDL058W DLT1Q04216 342 aa2.02□□□□□ -2.09
USO1YDL058W TDA9Q04545 1251 aa2.02□□□□□ -2.09
USO1YDL058W ADH6Q04894 360 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W YOR238WQ08634 303 aa2.02□□□□□ -2.09
USO1YDL058W LEU9Q12166 604 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W YLR108CQ12259 485 aa2.02□□□□□ -2.09
USO1YDL058W YCL001W-BQ96VH2 84 aa2.02□□□□□ -2.09
USO1YDL058W SPO14P36126 1683 aa2.02□□□□□ -2.09
USO1YDL058W PHO5P00635 467 aa2.02□□□□□ -2.09
USO1YDL058W ENO2P00925 437 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W MOD5P07884 428 aa2.02□□□□□ -2.09
USO1YDL058W PCK1P10963 549 aa2.02□□□□□ -2.09
USO1YDL058W PRP16P15938 1071 aaPredicted RBP2.02□□□□□ -2.09
USO1YDL058W YIH1P25637 258 aa2.02□□□□□ -2.09
USO1YDL058W UBC8P28263 218 aa2.02□□□□□ -2.09
USO1YDL058W HXT4P32467 576 aa2.02□□□□□ -2.09
USO1YDL058W UTR2P32623 467 aa2.02□□□□□ -2.09
USO1YDL058W ALK2P32789 676 aaPredicted RBP2.02□□□□□ -2.09
USO1YDL058W PTC4P38089 393 aa2.02□□□□□ -2.09
USO1YDL058W APN2P38207 520 aa2.02□□□□□ -2.09
USO1YDL058W FAT1P38225 669 aa2.02□□□□□ -2.09
USO1YDL058W GPI16P38875 610 aa2.02□□□□□ -2.09
USO1YDL058W AIM46P38885 310 aa2.02□□□□□ -2.09
USO1YDL058W DHH1P39517 506 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W VAC8P39968 578 aa2.02□□□□□ -2.09
USO1YDL058W YER010CP40011 234 aa2.02□□□□□ -2.09
USO1YDL058W SDP1P40479 209 aa2.02□□□□□ -2.09
USO1YDL058W PCI8P40512 444 aa2.02□□□□□ -2.09
USO1YDL058W BNA6P43619 295 aa2.02□□□□□ -2.09
USO1YDL058W MSE1P48525 536 aa2.02□□□□□ -2.09
USO1YDL058W MRX6P48564 524 aa2.02□□□□□ -2.09
USO1YDL058W MSB3P48566 633 aaPredicted RBP2.02□□□□□ -2.09
USO1YDL058W HFM1P51979 1187 aa2.02□□□□□ -2.09
USO1YDL058W FRK1Q03002 865 aaPredicted RBP2.02□□□□□ -2.09
USO1YDL058W YMR279CQ03263 540 aa2.02□□□□□ -2.09
USO1YDL058W MAK3Q03503 176 aa2.02□□□□□ -2.09
USO1YDL058W CSI1Q04368 295 aa2.02□□□□□ -2.09
USO1YDL058W PUN1Q06991 263 aa2.02□□□□□ -2.09
USO1YDL058W NBA1Q08229 501 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W YPR027CQ12079 277 aa2.02□□□□□ -2.09
USO1YDL058W YPT1P01123 206 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W HMG2P12684 1045 aa2.02□□□□□ -2.09
USO1YDL058W CBS2P14905 389 aa2.02□□□□□ -2.09
USO1YDL058W APA1P16550 321 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W PFK1P16861 987 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W RNA14P25298 677 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W YCR007CP25354 239 aa2.02□□□□□ -2.09
USO1YDL058W PPH3P32345 308 aa2.02□□□□□ -2.09
USO1YDL058W RPT1P33299 467 aaKnown RBP2.02□□□□□ -2.09
USO1YDL058W NTH2P35172 780 aa2.02□□□□□ -2.09
USO1YDL058W SPT23P35210 1082 aa2.02□□□□□ -2.09
USO1YDL058W SHE2P36068 246 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
USO1YDL058W VBA5P36172 582 aa2.02□□□□□ -2.09
USO1YDL058W MSR1P38714 643 aa2.02□□□□□ -2.09
USO1YDL058W LYS9P38999 446 aa2.02□□□□□ -2.09
USO1YDL058W AIM2P39721 246 aa2.02□□□□□ -2.09
USO1YDL058W YAL037WP39728 267 aa2.02□□□□□ -2.09
USO1YDL058W YEN1P40028 759 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms