RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeast

Gene RER1, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RER1	YCL001W	VPS25	P47142	202 aa		4.6	□□□□□ -1.67
RER1	YCL001W	TEP1	P53916	434 aa		4.6	□□□□□ -1.67
RER1	YCL001W	SLG1	P54867	378 aa		4.6	□□□□□ -1.67
RER1	YCL001W	YMR034C	Q05131	434 aa	Predicted RBP	4.6	□□□□□ -1.67
RER1	YCL001W	YLR297W	Q05899	129 aa		4.6	□□□□□ -1.67
RER1	YCL001W	RRD2	Q12461	358 aa		4.6	□□□□□ -1.67
RER1	YCL001W	MSS18	P08593	268 aa		4.59	□□□□□ -1.67
RER1	YCL001W	MAS1	P10507	462 aa		4.59	□□□□□ -1.67
RER1	YCL001W	GAC1	P28006	793 aa		4.59	□□□□□ -1.67
RER1	YCL001W	AGP2	P38090	596 aa		4.59	□□□□□ -1.67
RER1	YCL001W	SHE3	P38272	425 aa	Known RBP	4.59	□□□□□ -1.67
RER1	YCL001W	YHL041W	P38730	149 aa		4.59	□□□□□ -1.67
RER1	YCL001W	YLF2	P38746	405 aa		4.59	□□□□□ -1.67
RER1	YCL001W	VFA1	P40080	203 aa		4.59	□□□□□ -1.67
RER1	YCL001W	ZAP1	P47043	880 aa		4.59	□□□□□ -1.67
RER1	YCL001W	VMS1	Q04311	632 aa	Known RBP	4.59	□□□□□ -1.67
RER1	YCL001W	HCR1	Q05775	265 aa	Known RBP	4.59	□□□□□ -1.67
RER1	YCL001W	ECM22	Q05958	814 aa	Predicted RBP	4.59	□□□□□ -1.67
RER1	YCL001W	CSR1	Q06705	408 aa	Known RBP	4.59	□□□□□ -1.67
RER1	YCL001W	ABP140	Q08641	628 aa	Known RBP	4.59	□□□□□ -1.67
RER1	YCL001W	LEA1	Q08963	238 aa	Predicted RBP	4.59	□□□□□ -1.67
RER1	YCL001W	CDC37	P06101	506 aa	Known RBP	4.58	□□□□□ -1.68
RER1	YCL001W	RRT12	P25381	491 aa		4.58	□□□□□ -1.68
RER1	YCL001W	PPZ1	P26570	692 aa		4.58	□□□□□ -1.68
RER1	YCL001W	FRE1	P32791	686 aa		4.58	□□□□□ -1.68
RER1	YCL001W	TKL2	P33315	681 aa		4.58	□□□□□ -1.68
RER1	YCL001W	YET1	P35723	206 aa		4.58	□□□□□ -1.68
RER1	YCL001W	RPF2	P36160	344 aa	Known RBP	4.58	□□□□□ -1.68
RER1	YCL001W	PSY4	P38193	441 aa		4.58	□□□□□ -1.68
RER1	YCL001W	MET30	P39014	640 aa		4.58	□□□□□ -1.68
RER1	YCL001W	DJP1	P40564	432 aa		4.58	□□□□□ -1.68
RER1	YCL001W	MAD3	P47074	515 aa		4.58	□□□□□ -1.68
RER1	YCL001W	YJR054W	P47114	497 aa		4.58	□□□□□ -1.68
RER1	YCL001W	YNL144C	P53907	740 aa		4.58	□□□□□ -1.68
RER1	YCL001W	ESBP6	P53918	673 aa		4.58	□□□□□ -1.68
RER1	YCL001W	UBX4	P54730	416 aa		4.58	□□□□□ -1.68
RER1	YCL001W	YTH1	Q06102	208 aa	Predicted RBP	4.58	□□□□□ -1.68
RER1	YCL001W	GPM2	Q12008	311 aa		4.58	□□□□□ -1.68
RER1	YCL001W	TAF10	Q12030	206 aa		4.58	□□□□□ -1.68
RER1	YCL001W	AI5_BETA	Q9ZZX0	354 aa		4.58	□□□□□ -1.68
RER1	YCL001W	LAA1	P39526	2014 aa		4.58	□□□□□ -1.68
RER1	YCL001W	ILV2	P07342	687 aa	Known RBP	4.57	□□□□□ -1.68
RER1	YCL001W	YFL068W	P0CX99	160 aa		4.57	□□□□□ -1.68
RER1	YCL001W	YLL066W-A	P0CY00	160 aa		4.57	□□□□□ -1.68
RER1	YCL001W	YLL067W-A	P0CY01	160 aa		4.57	□□□□□ -1.68
RER1	YCL001W	PTC6	P25646	442 aa		4.57	□□□□□ -1.68
RER1	YCL001W	CSG2	P35206	410 aa		4.57	□□□□□ -1.68
RER1	YCL001W	RTT107	P38850	1070 aa		4.57	□□□□□ -1.68
RER1	YCL001W	ARB1	P40024	610 aa	Known RBP	4.57	□□□□□ -1.68
RER1	YCL001W	YIL169C	P40442	995 aa		4.57	□□□□□ -1.68
RER1	YCL001W	PSP1	P50896	841 aa	Known RBP	4.57	□□□□□ -1.68
RER1	YCL001W	ART5	P53244	586 aa	Known RBP	4.57	□□□□□ -1.68
RER1	YCL001W	MOT3	P54785	490 aa	Known RBP	4.57	□□□□□ -1.68
RER1	YCL001W	MZM1	Q03429	123 aa	Predicted RBP	4.57	□□□□□ -1.68
RER1	YCL001W	GSH2	Q08220	491 aa		4.57	□□□□□ -1.68
RER1	YCL001W	APC5	Q08683	685 aa		4.57	□□□□□ -1.68
RER1	YCL001W	RPS3	P05750	240 aa	Known RBP	4.56	□□□□□ -1.68
RER1	YCL001W	PHO2	P07269	559 aa		4.56	□□□□□ -1.68
RER1	YCL001W	MTF1	P14908	341 aa	Known RBP	4.56	□□□□□ -1.68
RER1	YCL001W	MSH1	P25846	959 aa		4.56	□□□□□ -1.68
RER1	YCL001W	NOP4	P37838	685 aa	Known RBP	4.56	□□□□□ -1.68
RER1	YCL001W	SIF2	P38262	535 aa		4.56	□□□□□ -1.68
RER1	YCL001W	FHL1	P39521	936 aa		4.56	□□□□□ -1.68
RER1	YCL001W	TFG2	P41896	400 aa	Predicted RBP	4.56	□□□□□ -1.68
RER1	YCL001W	PHO86	P46956	311 aa		4.56	□□□□□ -1.68
RER1	YCL001W	MUB1	Q03162	620 aa		4.56	□□□□□ -1.68
RER1	YCL001W	AAD4	Q07747	329 aa		4.56	□□□□□ -1.68
RER1	YCL001W	NRT1	Q08485	598 aa		4.56	□□□□□ -1.68
RER1	YCL001W	TMA16	Q08687	178 aa		4.56	□□□□□ -1.68
RER1	YCL001W	HRT3	Q12347	344 aa		4.56	□□□□□ -1.68
RER1	YCL001W	ROX1	P25042	368 aa		4.55	□□□□□ -1.68
RER1	YCL001W	PEX34	P25584	144 aa		4.55	□□□□□ -1.68
RER1	YCL001W	RAD16	P31244	790 aa		4.55	□□□□□ -1.68
RER1	YCL001W	EFB1	P32471	206 aa	Known RBP	4.55	□□□□□ -1.68
RER1	YCL001W	YKL097C	P34245	136 aa		4.55	□□□□□ -1.68
RER1	YCL001W	RPC25	P35718	212 aa		4.55	□□□□□ -1.68
RER1	YCL001W	APM3	P38153	483 aa		4.55	□□□□□ -1.68
RER1	YCL001W	TPA1	P40032	644 aa	Known RBP	4.55	□□□□□ -1.68
RER1	YCL001W	BTT1	P40314	149 aa	Predicted RBP	4.55	□□□□□ -1.68
RER1	YCL001W	SHQ1	P40486	507 aa	Predicted RBP	4.55	□□□□□ -1.68
RER1	YCL001W	MND1	P53102	219 aa		4.55	□□□□□ -1.68
RER1	YCL001W	YGL036W	P53185	909 aa	Predicted RBP	4.55	□□□□□ -1.68
RER1	YCL001W	HER2	Q03557	464 aa		4.55	□□□□□ -1.68
RER1	YCL001W	YBR255C-A	Q3E776	120 aa		4.55	□□□□□ -1.68
RER1	YCL001W	TOR2	P32600	2474 aa	Known RBP	4.54	□□□□□ -1.68
RER1	YCL001W	PHO81	P17442	1178 aa		4.54	□□□□□ -1.68
RER1	YCL001W	PDE1	P22434	369 aa		4.54	□□□□□ -1.68
RER1	YCL001W	DAL2	P25335	343 aa		4.54	□□□□□ -1.68
RER1	YCL001W	PUP3	P25451	205 aa	Known RBP	4.54	□□□□□ -1.68
RER1	YCL001W	CBF2	P32504	956 aa		4.54	□□□□□ -1.68
RER1	YCL001W	MRP4	P32902	394 aa		4.54	□□□□□ -1.68
RER1	YCL001W	RKM3	P38222	552 aa		4.54	□□□□□ -1.68
RER1	YCL001W	ARP1	P38696	384 aa		4.54	□□□□□ -1.68
RER1	YCL001W	CDC1	P40986	491 aa		4.54	□□□□□ -1.68
RER1	YCL001W	RSC1	P53236	928 aa		4.54	□□□□□ -1.68
RER1	YCL001W	DRN1	P53255	507 aa	Known RBP	4.54	□□□□□ -1.68
RER1	YCL001W	PRM6	Q04705	352 aa		4.54	□□□□□ -1.68
RER1	YCL001W	YPQ1	Q12010	308 aa		4.54	□□□□□ -1.68
RER1	YCL001W	VPS54	Q12071	889 aa		4.54	□□□□□ -1.68
RER1	YCL001W	NBP2	Q12163	236 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms