RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SLT2Q00772 484 aa2.23□□□□□ -2.05
NUP170YBL079W UTP21Q06078 939 aaPredicted RBP2.23□□□□□ -2.05
NUP170YBL079W YDL218WQ07629 317 aa2.23□□□□□ -2.05
NUP170YBL079W NOP12Q08208 459 aaKnown RBP2.23□□□□□ -2.05
NUP170YBL079W YPL216WQ08964 1102 aa2.23□□□□□ -2.05
NUP170YBL079W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
NUP170YBL079W PNS1Q12412 539 aa2.23□□□□□ -2.05
NUP170YBL079W SRN2Q99176 213 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-LR1P0C2J4 438 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-FP0CX61 438 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-GR2P0CX62 438 aa2.23□□□□□ -2.05
NUP170YBL079W GAL3P13045 520 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-CP25383 438 aa2.23□□□□□ -2.05
NUP170YBL079W MGT1P26188 188 aa2.23□□□□□ -2.05
NUP170YBL079W CAB3P36076 571 aa2.23□□□□□ -2.05
NUP170YBL079W OMA1P36163 345 aa2.23□□□□□ -2.05
NUP170YBL079W WSC4P38739 605 aa2.23□□□□□ -2.05
NUP170YBL079W YER184CP39961 794 aa2.23□□□□□ -2.05
NUP170YBL079W EMP65P40085 556 aa2.23□□□□□ -2.05
NUP170YBL079W NRD1P53617 575 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
NUP170YBL079W YPL071CQ02864 156 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-DR2Q03483 438 aa2.23□□□□□ -2.05
NUP170YBL079W BOP2Q06150 570 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-BQ12260 438 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-OR2Q12293 438 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-DR1Q12392 438 aa2.23□□□□□ -2.05
NUP170YBL079W ZRT2Q12436 422 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-OR1Q12439 438 aa2.23□□□□□ -2.05
NUP170YBL079W TY2A-DR3Q99303 438 aa2.23□□□□□ -2.05
NUP170YBL079W RHO1P06780 209 aaKnown RBP2.23□□□□□ -2.05
NUP170YBL079W MCM1P11746 286 aa2.23□□□□□ -2.05
NUP170YBL079W PHO13P19881 312 aa2.23□□□□□ -2.05
NUP170YBL079W DMC1P25453 334 aa2.23□□□□□ -2.05
NUP170YBL079W GUT2P32191 649 aa2.23□□□□□ -2.05
NUP170YBL079W SIN4P32259 974 aa2.23□□□□□ -2.05
NUP170YBL079W HXT1P32465 570 aa2.23□□□□□ -2.05
NUP170YBL079W SRP101P32916 621 aa2.23□□□□□ -2.05
NUP170YBL079W OCA1P50946 238 aaPredicted RBP2.23□□□□□ -2.05
NUP170YBL079W COG6P53959 839 aa2.23□□□□□ -2.05
NUP170YBL079W YMR210WQ03649 449 aa2.23□□□□□ -2.05
NUP170YBL079W YDR249CQ03787 373 aa2.23□□□□□ -2.05
NUP170YBL079W YOR387CQ08910 206 aa2.23□□□□□ -2.05
NUP170YBL079W TRM8Q12009 286 aa2.23□□□□□ -2.05
NUP170YBL079W LDB17Q12342 491 aa2.23□□□□□ -2.05
NUP170YBL079W RBK1P25332 333 aa2.23□□□□□ -2.05
NUP170YBL079W SEC31P38968 1273 aaKnown RBP2.23□□□□□ -2.05
NUP170YBL079W LYS1P38998 373 aaRIP-Chip data2.23□□□□□ -2.05not detected
NUP170YBL079W SEO1P39709 593 aa2.23□□□□□ -2.05
NUP170YBL079W YIL086CP40503 102 aa2.23□□□□□ -2.05
NUP170YBL079W GTS1P40956 396 aa2.23□□□□□ -2.05
NUP170YBL079W SEC27P41811 889 aaKnown RBP2.23□□□□□ -2.05
NUP170YBL079W RRT5P43607 289 aa2.23□□□□□ -2.05
NUP170YBL079W SPT20P50875 604 aa2.23□□□□□ -2.05
NUP170YBL079W NUP100Q02629 959 aa2.23□□□□□ -2.05
NUP170YBL079W STP3Q05937 343 aa2.23□□□□□ -2.05
NUP170YBL079W UAF30Q08747 228 aa2.23□□□□□ -2.05
NUP170YBL079W RCN2Q12044 265 aa2.23□□□□□ -2.05
NUP170YBL079W TGS1Q12052 315 aa2.23□□□□□ -2.05
NUP170YBL079W HOP1P20050 605 aa2.22□□□□□ -2.05
NUP170YBL079W GBP2P25555 427 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
NUP170YBL079W MGR1P25573 417 aa2.22□□□□□ -2.05
NUP170YBL079W PEX2P32800 271 aa2.22□□□□□ -2.05
NUP170YBL079W SCD5P34758 872 aa2.22□□□□□ -2.05
NUP170YBL079W EXO84P38261 753 aa2.22□□□□□ -2.05
NUP170YBL079W CEM1P39525 442 aa2.22□□□□□ -2.05
NUP170YBL079W MEF2P39677 819 aa2.22□□□□□ -2.05
NUP170YBL079W YAT2P40017 923 aa2.22□□□□□ -2.05
NUP170YBL079W LSM5P40089 93 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W REF2P42073 533 aaPredicted RBP2.22□□□□□ -2.05
NUP170YBL079W SAD1P43589 448 aa2.22□□□□□ -2.05
NUP170YBL079W CIS3P47001 227 aa2.22□□□□□ -2.05
NUP170YBL079W AMA1P50082 593 aa2.22□□□□□ -2.05
NUP170YBL079W MAL13P53338 473 aa2.22□□□□□ -2.05
NUP170YBL079W NUP53Q03790 475 aa2.22□□□□□ -2.05
NUP170YBL079W HEL2Q05580 639 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W BUR2Q05949 395 aa2.22□□□□□ -2.05
NUP170YBL079W NMD4Q12129 218 aa2.22□□□□□ -2.05
NUP170YBL079W YLR462WO13556 202 aa2.22□□□□□ -2.05
NUP170YBL079W AI1P03875 834 aa2.22□□□□□ -2.05
NUP170YBL079W ARG4P04076 463 aaPredicted RBP2.22□□□□□ -2.05
NUP170YBL079W PRB1P09232 635 aa2.22□□□□□ -2.05
NUP170YBL079W RPS4AP0CX35 261 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W RPS4BP0CX36 261 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W GCD2P12754 651 aaPredicted RBP2.22□□□□□ -2.05
NUP170YBL079W HSC82P15108 705 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W KAR3P17119 729 aa2.22□□□□□ -2.05
NUP170YBL079W ATP12P22135 325 aa2.22□□□□□ -2.05
NUP170YBL079W HRR25P29295 494 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W RRT2P38332 387 aa2.22□□□□□ -2.05
NUP170YBL079W YHR020WP38708 688 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W YHL049CP38722 271 aa2.22□□□□□ -2.05
NUP170YBL079W CCT4P39078 528 aaKnown RBP2.22□□□□□ -2.05
NUP170YBL079W YEL075CP39972 122 aa2.22□□□□□ -2.05
NUP170YBL079W YMR134WP40207 237 aa2.22□□□□□ -2.05
NUP170YBL079W INA22P40576 216 aa2.22□□□□□ -2.05
NUP170YBL079W YFL064CP43540 174 aa2.22□□□□□ -2.05
NUP170YBL079W HSV2P50079 448 aaPredicted RBP2.22□□□□□ -2.05
NUP170YBL079W SHE4P51534 789 aa2.22□□□□□ -2.05
NUP170YBL079W YIP4P53093 235 aa2.22□□□□□ -2.05
NUP170YBL079W EFM5P53200 248 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms