RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W BOP3P53958 396 aa5.66□□□□□ -1.5
SHP1YBL058W SPP2Q02521 185 aa5.66□□□□□ -1.5
SHP1YBL058W ECI1Q05871 280 aa5.66□□□□□ -1.5
SHP1YBL058W VAC14Q06708 880 aa5.66□□□□□ -1.5
SHP1YBL058W TEN1Q07921 160 aa5.66□□□□□ -1.5
SHP1YBL058W HAL9Q12180 1030 aa5.66□□□□□ -1.5
SHP1YBL058W YOR114WQ12219 294 aa5.66□□□□□ -1.5
SHP1YBL058W TY4A-HQ6Q5P6 413 aa5.66□□□□□ -1.5
SHP1YBL058W RPL7AP05737 244 aaKnown RBP5.65□□□□□ -1.5
SHP1YBL058W CDC21P06785 304 aa5.65□□□□□ -1.5
SHP1YBL058W KAR1P11927 433 aa5.65□□□□□ -1.5
SHP1YBL058W MET8P15807 274 aa5.65□□□□□ -1.5
SHP1YBL058W AGP1P25376 633 aa5.65□□□□□ -1.5
SHP1YBL058W ADH7P25377 361 aa5.65□□□□□ -1.5
SHP1YBL058W NIP1P32497 812 aaKnown RBP5.65□□□□□ -1.5
SHP1YBL058W SPF1P39986 1215 aaKnown RBP5.65□□□□□ -1.5
SHP1YBL058W IBA57P47158 497 aa5.65□□□□□ -1.5
SHP1YBL058W PAN2P53010 1115 aaPredicted RBP5.65□□□□□ -1.5
SHP1YBL058W SED5Q01590 340 aa5.65□□□□□ -1.5
SHP1YBL058W MRS2Q01926 470 aa5.65□□□□□ -1.5
SHP1YBL058W GIC2Q06648 383 aa5.65□□□□□ -1.5
SHP1YBL058W SYT1Q06836 1226 aa5.65□□□□□ -1.5
SHP1YBL058W CUE5Q08412 411 aaKnown RBP5.65□□□□□ -1.5
SHP1YBL058W RPL7BQ12213 244 aaKnown RBP5.65□□□□□ -1.5
SHP1YBL058W ICT1Q12385 394 aa5.65□□□□□ -1.5
SHP1YBL058W RAD1P06777 1100 aa5.64□□□□□ -1.51
SHP1YBL058W YML002WP0CF17 737 aa5.64□□□□□ -1.51
SHP1YBL058W ARG1P22768 420 aa5.64□□□□□ -1.51
SHP1YBL058W YCK2P23292 546 aaKnown RBP5.64□□□□□ -1.51
SHP1YBL058W CPR3P25719 182 aa5.64□□□□□ -1.51
SHP1YBL058W URA7P28274 579 aaKnown RBP5.64□□□□□ -1.51
SHP1YBL058W TPS2P31688 896 aaKnown RBP5.64□□□□□ -1.51
SHP1YBL058W MKK2P32491 506 aa5.64□□□□□ -1.51
SHP1YBL058W ORC2P32833 620 aa5.64□□□□□ -1.51
SHP1YBL058W INM1P38710 295 aa5.64□□□□□ -1.51
SHP1YBL058W AXL2P38928 823 aa5.64□□□□□ -1.51
SHP1YBL058W MNN1P39106 762 aa5.64□□□□□ -1.51
SHP1YBL058W SER3P40054 469 aa5.64□□□□□ -1.51
SHP1YBL058W VRG4P40107 337 aa5.64□□□□□ -1.51
SHP1YBL058W QDR2P40474 542 aa5.64□□□□□ -1.51
SHP1YBL058W NMD5P46970 1048 aa5.64□□□□□ -1.51
SHP1YBL058W JHD2P47156 728 aaPredicted RBP5.64□□□□□ -1.51
SHP1YBL058W TIS11P47977 285 aa5.64□□□□□ -1.51
SHP1YBL058W RPL22BP56628 122 aaKnown RBP5.64□□□□□ -1.51
SHP1YBL058W UTP6Q02354 440 aaKnown RBP5.64□□□□□ -1.51
SHP1YBL058W TPP1Q03796 238 aa5.64□□□□□ -1.51
SHP1YBL058W URH1Q04179 340 aa5.64□□□□□ -1.51
SHP1YBL058W CDC123Q05791 360 aa5.64□□□□□ -1.51
SHP1YBL058W MDM30Q05930 598 aa5.64□□□□□ -1.51
SHP1YBL058W YPQ2Q06328 317 aa5.64□□□□□ -1.51
SHP1YBL058W REH1Q06709 432 aa5.64□□□□□ -1.51
SHP1YBL058W BRR1Q99177 341 aaPredicted RBP5.64□□□□□ -1.51
SHP1YBL058W COX1P00401 534 aa5.63□□□□□ -1.51
SHP1YBL058W CMD1P06787 147 aaKnown RBP5.63□□□□□ -1.51
SHP1YBL058W GCR1P07261 785 aa5.63□□□□□ -1.51
SHP1YBL058W SEC53P07283 254 aaKnown RBP5.63□□□□□ -1.51
SHP1YBL058W CBF1P17106 351 aa5.63□□□□□ -1.51
SHP1YBL058W KAP122P32767 1081 aa5.63□□□□□ -1.51
SHP1YBL058W MFT1P33441 392 aaKnown RBP5.63□□□□□ -1.51
SHP1YBL058W CAB3P36076 571 aa5.63□□□□□ -1.51
SHP1YBL058W EFM1P38732 585 aa5.63□□□□□ -1.51
SHP1YBL058W MNL1P38888 796 aa5.63□□□□□ -1.51
SHP1YBL058W CAJ1P39101 391 aa5.63□□□□□ -1.51
SHP1YBL058W CCT8P47079 568 aaKnown RBP5.63□□□□□ -1.51
SHP1YBL058W YJR115WP47152 169 aa5.63□□□□□ -1.51
SHP1YBL058W APT1P49435 187 aaKnown RBP5.63□□□□□ -1.51
SHP1YBL058W SRP1Q02821 542 aaKnown RBP5.63□□□□□ -1.51
SHP1YBL058W YET2Q04210 160 aa5.63□□□□□ -1.51
SHP1YBL058W YMR034CQ05131 434 aaPredicted RBP5.63□□□□□ -1.51
SHP1YBL058W HUA2Q12134 243 aa5.63□□□□□ -1.51
SHP1YBL058W YPR022CQ12139 1133 aa5.63□□□□□ -1.51
SHP1YBL058W SLH1P53327 1967 aaKnown RBP5.62□□□□□ -1.51
SHP1YBL058W PEP5P12868 1029 aa5.62□□□□□ -1.51
SHP1YBL058W RSR1P13856 272 aa5.62□□□□□ -1.51
SHP1YBL058W VMA3P25515 160 aa5.62□□□□□ -1.51
SHP1YBL058W BUD14P27637 709 aa5.62□□□□□ -1.51
SHP1YBL058W NAM9P27929 486 aa5.62□□□□□ -1.51
SHP1YBL058W UGP1P32861 499 aaKnown RBP5.62□□□□□ -1.51
SHP1YBL058W BEM3P32873 1128 aa5.62□□□□□ -1.51
SHP1YBL058W KAE1P36132 386 aa5.62□□□□□ -1.51
SHP1YBL058W YHR112CP38716 378 aa5.62□□□□□ -1.51
SHP1YBL058W MET30P39014 640 aa5.62□□□□□ -1.51
SHP1YBL058W HAT2P39984 401 aa5.62□□□□□ -1.51
SHP1YBL058W NDE1P40215 560 aa5.62□□□□□ -1.51
SHP1YBL058W MNT3P40549 630 aa5.62□□□□□ -1.51
SHP1YBL058W PHB1P40961 287 aa5.62□□□□□ -1.51
SHP1YBL058W AZF1P41696 914 aa5.62□□□□□ -1.51
SHP1YBL058W YGR015CP53208 328 aa5.62□□□□□ -1.51
SHP1YBL058W ATG23Q06671 453 aa5.62□□□□□ -1.51
SHP1YBL058W RAX1Q08760 435 aa5.62□□□□□ -1.51
SHP1YBL058W ATG29Q12092 213 aa5.62□□□□□ -1.51
SHP1YBL058W PET123P17558 318 aa5.61□□□□□ -1.51
SHP1YBL058W BAS1P22035 811 aa5.61□□□□□ -1.51
SHP1YBL058W CHA1P25379 360 aaKnown RBP5.61□□□□□ -1.51
SHP1YBL058W MXR2P25566 168 aa5.61□□□□□ -1.51
SHP1YBL058W ADE1P27616 306 aa5.61□□□□□ -1.51
SHP1YBL058W YJU2P28320 278 aaPredicted RBP5.61□□□□□ -1.51
SHP1YBL058W MBP1P39678 833 aa5.61□□□□□ -1.51
SHP1YBL058W STB2P46679 850 aa5.61□□□□□ -1.51
SHP1YBL058W YJR149WP47177 404 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms