RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TRPV1Q8NER1 839 aa11.73□□□□□ -0.53
SPG11-212ENST00000558790 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
SPG11-212ENST00000558790 EAF2Q96CJ1 260 aaPredicted RBP11.73□□□□□ -0.53
SPG11-212ENST00000558790 EDC3Q96F86 508 aaKnown RBP11.73□□□□□ -0.53
SPG11-212ENST00000558790 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
SPG11-212ENST00000558790 SENP6Q9GZR1 1112 aaPredicted RBP11.73□□□□□ -0.53
SPG11-212ENST00000558790 RPAP3Q9H6T3 665 aaPredicted RBP11.73□□□□□ -0.53
SPG11-212ENST00000558790 ANTXR1Q9H6X2 564 aa11.73□□□□□ -0.53
SPG11-212ENST00000558790 HOXC6P09630 235 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 CYBAP13498 195 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 CYP2C19P33261 490 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 GUCY1A2P33402 732 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 PLCD1P51178 756 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 PKDCCQ504Y2 493 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 C9orf50Q5SZB4 431 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 ALYREFQ86V81 257 aaKnown RBP11.72□□□□□ -0.53
SPG11-212ENST00000558790 CERS3Q8IU89 383 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 LPAR1Q92633 364 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 NECAB3Q96P71 396 aaPredicted RBP11.72□□□□□ -0.53
SPG11-212ENST00000558790 NOP58Q9Y2X3 529 aaKnown RBP11.72□□□□□ -0.53
SPG11-212ENST00000558790 PCDHGA11Q9Y5H2 935 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 IVNS1ABPQ9Y6Y0 642 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 TRANK1O15050 2925 aa11.72□□□□□ -0.53
SPG11-212ENST00000558790 USP34Q70CQ2 3546 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 USP17L12C9JPN9 530 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 USP17L21D6R901 530 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 DNM1LO00429 736 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 CAPN5O15484 640 aaPredicted RBP11.71□□□□□ -0.53
SPG11-212ENST00000558790 MSCO60682 206 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 IGHA2P01877 340 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 CNGA1P29973 690 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 ATP2B2Q01814 1243 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 SEPT2Q15019 361 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 SHHQ15465 462 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
SPG11-212ENST00000558790 RIOK1Q9BRS2 568 aaKnown RBP11.71□□□□□ -0.53
SPG11-212ENST00000558790 DNAAF2Q9NVR5 837 aaKnown RBP11.71□□□□□ -0.53
SPG11-212ENST00000558790 CFAP54Q96N23 3096 aa11.71□□□□□ -0.54
SPG11-212ENST00000558790 GBF1Q92538 1859 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 ADH1AP07327 375 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 RLBP1P12271 317 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 ADORA2AP29274 412 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 RTP1P59025 263 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 GABPAQ06546 454 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 ITPRIPQ8IWB1 547 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 FTSJ3Q8IY81 847 aaKnown RBP11.7□□□□□ -0.54
SPG11-212ENST00000558790 LBHD1Q9BQE6 289 aaPredicted RBP11.7□□□□□ -0.54
SPG11-212ENST00000558790 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
SPG11-212ENST00000558790 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
SPG11-212ENST00000558790 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 RAB6BQ9NRW1 208 aa11.7□□□□□ -0.54
SPG11-212ENST00000558790 A0A1W2PRG0 241 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 CCER2I3L3R5 266 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 RELBQ01201 579 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 GRIN2CQ14957 1233 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 GJC2Q5T442 439 aaPredicted RBP11.69□□□□□ -0.54
SPG11-212ENST00000558790 ANO1Q5XXA6 986 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 OLFML2BQ68BL8 750 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 CEP85Q6P2H3 762 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 CYP2U1Q7Z449 544 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 AACSQ86V21 672 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 UHRF1Q96T88 793 aaPredicted RBP11.69□□□□□ -0.54
SPG11-212ENST00000558790 CABP5Q9NP86 173 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 ATP11BQ9Y2G3 1177 aa11.69□□□□□ -0.54
SPG11-212ENST00000558790 MPHOSPH10O00566 681 aaKnown RBP11.68□□□□□ -0.54
SPG11-212ENST00000558790 DGAT1O75907 488 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 AVPP01185 164 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
SPG11-212ENST00000558790 PDE6AP16499 860 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 ATP1A2P50993 1020 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 PTK7Q13308 1070 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 TMED8Q6PL24 325 aaPredicted RBP11.68□□□□□ -0.54
SPG11-212ENST00000558790 Q6ZVU0 165 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 DPP9Q86TI2 863 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 MEIOBQ8N635 442 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 KDF1Q8NAX2 398 aaPredicted RBP11.68□□□□□ -0.54
SPG11-212ENST00000558790 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 LRFN3Q9BTN0 628 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 SPATC1LQ9H0A9 340 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
SPG11-212ENST00000558790 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 COBLO75128 1261 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 ATG7O95352 703 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 CYP2D6P10635 497 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 ERCC3P19447 782 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 COG2Q14746 738 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 SNX17Q15036 470 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 TRIM60Q495X7 471 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
SPG11-212ENST00000558790 ARHGEF10LQ9HCE6 1279 aa11.67□□□□□ -0.54
SPG11-212ENST00000558790 PRDM5Q9NQX1 630 aaPredicted RBP11.67□□□□□ -0.54
SPG11-212ENST00000558790 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms