RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Calcoco1Q8CGU1 691 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 SltmQ8CH25 1031 aaKnown RBP13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Fbxo18Q8K2I9 1042 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Q8VDP2 222 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Thap2Q9D305 217 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Adamtsl1Q8BLI0 1745 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Gm7356A0A087WSA6 508 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 4932429P05RikA2ADI4 785 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Speer4f2E9Q366 295 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Kif23E9Q5G3 953 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 CalrP14211 416 aaKnown RBP13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ift88Q61371 824 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Fam196bQ6GQV1 535 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Gpbp1Q6NXH3 473 aaKnown RBP13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Aggf1Q7TN31 711 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Arl6ip4Q9JM93 229 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ttbk2Q3UVR3 1243 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ddx31Q6NZQ2 687 aaKnown RBP13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tmc4Q7TQ65 694 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Trub2Q91WG3 331 aaKnown RBP13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 SelenooQ9DBC0 667 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Lztfl1Q9JHQ5 299 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Pex3Q9QXY9 372 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ulk4Q3V129 1303 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Itgb4A2A863 1818 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Frmpd3A0A140LIW3 1774 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Cdr2P97817 455 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Lamc2Q61092 1191 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Adam6bQ6IMH7 756 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Haus6Q6NV99 933 aaKnown RBP13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tubb2aQ7TMM9 445 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Krt222Q8CCX5 294 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tubb2bQ9CWF2 445 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Itga2bQ9QUM0 1033 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Orc1Q9Z1N2 840 aaKnown RBP13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Herc3A6H6S0 1050 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 IkbkbO88351 757 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tubb5P99024 444 aaKnown RBP13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Fam107bQ3TGF2 131 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Sycp1Q62209 993 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 RragbQ6NTA4 374 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Snd1Q78PY7 910 aaKnown RBP13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Gpr101Q80T62 511 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Setdb2Q8C267 713 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Card14Q99KF0 999 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Snrnp35Q9D384 244 aa13.66□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Myh14Q6URW6 2000 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Flvcr1B2RXV4 560 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Nap1l1P28656 391 aaKnown RBP13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Fdx1P46656 188 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Cnga2Q62398 664 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Rasal3Q8C2K5 1041 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Txndc5Q91W90 417 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Mfap3Q922T2 349 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tjap1Q9DCD5 539 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Col2a1P28481 1487 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Vmn2r71L7N2D8 855 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Kifap3P70188 793 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Sap30bpQ02614 308 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 LbrQ3U9G9 626 aaKnown RBP13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Kiaa1211Q5PR69 1207 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 MmeQ61391 750 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ccna1Q61456 421 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Kcnj11Q61743 390 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Mtss1lQ6P9S0 715 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tango6Q8C3S2 1079 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Matr3Q8K310 846 aaKnown RBP13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 GlyctkQ8QZY2 523 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Atxn7Q8R4I1 867 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Eps8l1Q8R5F8 716 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tc2nQ91XT6 489 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Pcdha12Q91Y18 950 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 PpanQ91YU8 470 aaKnown RBP13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Kctd10Q922M3 315 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Cep83Q9D5R3 692 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Slc5a4aQ9ET37 656 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Nlrp5Q9R1M5 1163 aa13.65□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Lbhd1A0A087WPA0 259 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Gm6588E9Q3K0 461 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Spata18Q0P557 537 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Nab2Q61127 525 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 WaplQ65Z40 1200 aaKnown RBP13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 AdpgkQ8VDL4 496 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Galntl5Q9D4M9 431 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 SyncQ9EPM5 470 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Armc3A2AU72 881 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Enc1O35709 589 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pbx1P41778 430 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Eif3j1Q3UGC7 261 aaKnown RBP13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Kctd1Q5M956 257 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Large2Q5XPT3 690 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Eif3j2Q66JS6 263 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Hpcal4Q8BGZ1 191 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ppfibp1Q8C8U0 969 aaKnown RBP13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Eif3cQ8R1B4 911 aaKnown RBP13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Q9CYI0 393 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Col1a1P11087 1453 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pth1rP41593 591 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Brip1Q5SXJ3 1174 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cdc23Q8BGZ4 597 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms