Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm25239-201ENSMUST00000174915 86 ntBASIC41.14■■■■■ 4.18
IkbkbO88351 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
IkbkbO88351 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
IkbkbO88351 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
IkbkbO88351 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
IkbkbO88351 Gm15042-201ENSMUST00000120212 883 ntBASIC36.07■■■■□ 3.36
IkbkbO88351 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.05■■■■□ 3.36
IkbkbO88351 Gm24109-201ENSMUST00000175489 103 ntBASIC35.59■■■■□ 3.29
IkbkbO88351 Gm15045-201ENSMUST00000117359 883 ntBASIC35.3■■■■□ 3.24
IkbkbO88351 Psd-208ENSMUST00000224556 2034 ntBASIC35.11■■■■□ 3.21
IkbkbO88351 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
IkbkbO88351 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
IkbkbO88351 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
IkbkbO88351 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
IkbkbO88351 Gm23366-201ENSMUST00000175022 89 ntBASIC34.36■■■■□ 3.09
IkbkbO88351 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
IkbkbO88351 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
IkbkbO88351 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
IkbkbO88351 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
IkbkbO88351 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.66■■■□□ 2.98
IkbkbO88351 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
IkbkbO88351 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
IkbkbO88351 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
IkbkbO88351 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
IkbkbO88351 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
IkbkbO88351 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
IkbkbO88351 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
IkbkbO88351 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
IkbkbO88351 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.14■■■□□ 2.9
IkbkbO88351 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
IkbkbO88351 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
IkbkbO88351 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
IkbkbO88351 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
IkbkbO88351 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.97■■■□□ 2.87
IkbkbO88351 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.91■■■□□ 2.86
IkbkbO88351 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
IkbkbO88351 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
IkbkbO88351 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.75■■■□□ 2.83
IkbkbO88351 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
IkbkbO88351 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
IkbkbO88351 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
IkbkbO88351 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
IkbkbO88351 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
IkbkbO88351 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
IkbkbO88351 Gm25238-201ENSMUST00000174914 89 ntBASIC32.44■■■□□ 2.78
IkbkbO88351 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.38■■■□□ 2.77
IkbkbO88351 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
IkbkbO88351 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.35■■■□□ 2.77
IkbkbO88351 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
IkbkbO88351 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
IkbkbO88351 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
IkbkbO88351 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
IkbkbO88351 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.99■■■□□ 2.71
IkbkbO88351 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
IkbkbO88351 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
IkbkbO88351 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
IkbkbO88351 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.75■■■□□ 2.67
IkbkbO88351 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.72■■■□□ 2.67
IkbkbO88351 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
IkbkbO88351 Gm27325-201ENSMUST00000175467 74 ntBASIC31.63■■■□□ 2.65
IkbkbO88351 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.6■■■□□ 2.65
IkbkbO88351 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
IkbkbO88351 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.56■■■□□ 2.64
IkbkbO88351 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
IkbkbO88351 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
IkbkbO88351 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
IkbkbO88351 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.43■■■□□ 2.62
IkbkbO88351 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
IkbkbO88351 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.33■■■□□ 2.61
IkbkbO88351 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
IkbkbO88351 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.28■■■□□ 2.6
IkbkbO88351 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
IkbkbO88351 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
IkbkbO88351 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.19■■■□□ 2.58
IkbkbO88351 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
IkbkbO88351 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
IkbkbO88351 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
IkbkbO88351 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.07■■■□□ 2.57
IkbkbO88351 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
IkbkbO88351 Gm25262-201ENSMUST00000174934 133 ntBASIC30.99■■■□□ 2.55
IkbkbO88351 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
IkbkbO88351 Rab21-202ENSMUST00000218831 843 ntBASIC30.96■■■□□ 2.55
IkbkbO88351 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
IkbkbO88351 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
IkbkbO88351 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
IkbkbO88351 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
IkbkbO88351 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
IkbkbO88351 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
IkbkbO88351 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
IkbkbO88351 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
IkbkbO88351 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.85■■■□□ 2.53
IkbkbO88351 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
IkbkbO88351 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
IkbkbO88351 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.78■■■□□ 2.52
IkbkbO88351 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
IkbkbO88351 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.74■■■□□ 2.51
IkbkbO88351 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
IkbkbO88351 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
IkbkbO88351 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
IkbkbO88351 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms