Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Gm25239-201ENSMUST00000174915 86 ntBASIC45,89■■■■■ 4,94
Atxn7Q8R4I1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42,52■■■■■ 4,4
Atxn7Q8R4I1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41,84■■■■■ 4,29
Atxn7Q8R4I1 Gm15042-201ENSMUST00000120212 883 ntBASIC39,93■■■■□ 3,98
Atxn7Q8R4I1 Gm24109-201ENSMUST00000175489 103 ntBASIC39,86■■■■□ 3,97
Atxn7Q8R4I1 Gm15045-201ENSMUST00000117359 883 ntBASIC39,07■■■■□ 3,85
Atxn7Q8R4I1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38,77■■■■□ 3,8
Atxn7Q8R4I1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38,76■■■■□ 3,8
Atxn7Q8R4I1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38,73■■■■□ 3,79
Atxn7Q8R4I1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38,44■■■■□ 3,74
Atxn7Q8R4I1 Gm23366-201ENSMUST00000175022 89 ntBASIC38,25■■■■□ 3,71
Atxn7Q8R4I1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38,13■■■■□ 3,69
Atxn7Q8R4I1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38,08■■■■□ 3,69
Atxn7Q8R4I1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37,47■■■■□ 3,59
Atxn7Q8R4I1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37,28■■■■□ 3,56
Atxn7Q8R4I1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37,23■■■■□ 3,55
Atxn7Q8R4I1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36,99■■■■□ 3,51
Atxn7Q8R4I1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36,88■■■■□ 3,49
Atxn7Q8R4I1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36,79■■■■□ 3,48
Atxn7Q8R4I1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36,79■■■■□ 3,48
Atxn7Q8R4I1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36,74■■■■□ 3,47
Atxn7Q8R4I1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36,68■■■■□ 3,46
Atxn7Q8R4I1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36,67■■■■□ 3,46
Atxn7Q8R4I1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36,57■■■■□ 3,44
Atxn7Q8R4I1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36,43■■■■□ 3,42
Atxn7Q8R4I1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36,32■■■■□ 3,4
Atxn7Q8R4I1 Gm25238-201ENSMUST00000174914 89 ntBASIC36,3■■■■□ 3,4
Atxn7Q8R4I1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36,3■■■■□ 3,4
Atxn7Q8R4I1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36,27■■■■□ 3,4
Atxn7Q8R4I1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36,25■■■■□ 3,39
Atxn7Q8R4I1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36,24■■■■□ 3,39
Atxn7Q8R4I1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36,19■■■■□ 3,38
Atxn7Q8R4I1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35,93■■■■□ 3,34
Atxn7Q8R4I1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Atxn7Q8R4I1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35,84■■■■□ 3,33
Atxn7Q8R4I1 Psd-208ENSMUST00000224556 2034 ntBASIC35,58■■■■□ 3,29
Atxn7Q8R4I1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35,57■■■■□ 3,28
Atxn7Q8R4I1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35,47■■■■□ 3,27
Atxn7Q8R4I1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35,28■■■■□ 3,24
Atxn7Q8R4I1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35,25■■■■□ 3,23
Atxn7Q8R4I1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35,24■■■■□ 3,23
Atxn7Q8R4I1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35,2■■■■□ 3,23
Atxn7Q8R4I1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35,04■■■■□ 3,2
Atxn7Q8R4I1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35,02■■■■□ 3,2
Atxn7Q8R4I1 Gm27325-201ENSMUST00000175467 74 ntBASIC34,97■■■■□ 3,19
Atxn7Q8R4I1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34,92■■■■□ 3,18
Atxn7Q8R4I1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34,92■■■■□ 3,18
Atxn7Q8R4I1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34,82■■■■□ 3,16
Atxn7Q8R4I1 Gm25262-201ENSMUST00000174934 133 ntBASIC34,76■■■■□ 3,16
Atxn7Q8R4I1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Atxn7Q8R4I1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34,63■■■■□ 3,13
Atxn7Q8R4I1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34,54■■■■□ 3,12
Atxn7Q8R4I1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34,49■■■■□ 3,11
Atxn7Q8R4I1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34,41■■■■□ 3,1
Atxn7Q8R4I1 Rab21-202ENSMUST00000218831 843 ntBASIC34,41■■■■□ 3,1
Atxn7Q8R4I1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34,4■■■■□ 3,1
Atxn7Q8R4I1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34,4■■■■□ 3,1
Atxn7Q8R4I1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34,39■■■■□ 3,1
Atxn7Q8R4I1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34,32■■■■□ 3,08
Atxn7Q8R4I1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34,28■■■■□ 3,08
Atxn7Q8R4I1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,18■■■■□ 3,06
Atxn7Q8R4I1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,16■■■■□ 3,06
Atxn7Q8R4I1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34,15■■■■□ 3,06
Atxn7Q8R4I1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34,12■■■■□ 3,05
Atxn7Q8R4I1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
Atxn7Q8R4I1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34,07■■■■□ 3,04
Atxn7Q8R4I1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34,06■■■■□ 3,04
Atxn7Q8R4I1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34,04■■■■□ 3,04
Atxn7Q8R4I1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34,03■■■■□ 3,04
Atxn7Q8R4I1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34,01■■■■□ 3,03
Atxn7Q8R4I1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33,93■■■■□ 3,02
Atxn7Q8R4I1 Gm26115-201ENSMUST00000175605 87 ntBASIC33,93■■■■□ 3,02
Atxn7Q8R4I1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33,92■■■■□ 3,02
Atxn7Q8R4I1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
Atxn7Q8R4I1 Gm8109-201ENSMUST00000194076 746 ntBASIC33,81■■■■□ 3
Atxn7Q8R4I1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33,8■■■■□ 3
Atxn7Q8R4I1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33,79■■■■□ 3
Atxn7Q8R4I1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33,77■■■■□ 3
Atxn7Q8R4I1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33,76■■■■□ 3
Atxn7Q8R4I1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,74■■■□□ 2,99
Atxn7Q8R4I1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33,72■■■□□ 2,99
Atxn7Q8R4I1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33,71■■■□□ 2,99
Atxn7Q8R4I1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33,67■■■□□ 2,98
Atxn7Q8R4I1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33,66■■■□□ 2,98
Atxn7Q8R4I1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,63■■■□□ 2,97
Atxn7Q8R4I1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33,57■■■□□ 2,96
Atxn7Q8R4I1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33,53■■■□□ 2,96
Atxn7Q8R4I1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33,53■■■□□ 2,96
Atxn7Q8R4I1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33,52■■■□□ 2,96
Atxn7Q8R4I1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33,52■■■□□ 2,96
Atxn7Q8R4I1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33,5■■■□□ 2,95
Atxn7Q8R4I1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33,48■■■□□ 2,95
Atxn7Q8R4I1 Gm10524-201ENSMUST00000181931 1893 ntBASIC33,41■■■□□ 2,94
Atxn7Q8R4I1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33,37■■■□□ 2,93
Atxn7Q8R4I1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33,31■■■□□ 2,92
Atxn7Q8R4I1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,3■■■□□ 2,92
Atxn7Q8R4I1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33,3■■■□□ 2,92
Atxn7Q8R4I1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33,29■■■□□ 2,92
Atxn7Q8R4I1 Gm42596-201ENSMUST00000196305 1958 ntBASIC33,26■■■□□ 2,91
Atxn7Q8R4I1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33,25■■■□□ 2,91
Retrieved 100 of 76,532 protein–RNA pairs in 7,6 ms