Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Gm25239-201ENSMUST00000174915 86 ntBASIC45.89■■■■■ 4.94
Atxn7Q8R4I1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.52■■■■■ 4.4
Atxn7Q8R4I1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.84■■■■■ 4.29
Atxn7Q8R4I1 Gm15042-201ENSMUST00000120212 883 ntBASIC39.93■■■■□ 3.98
Atxn7Q8R4I1 Gm24109-201ENSMUST00000175489 103 ntBASIC39.86■■■■□ 3.97
Atxn7Q8R4I1 Gm15045-201ENSMUST00000117359 883 ntBASIC39.07■■■■□ 3.85
Atxn7Q8R4I1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Atxn7Q8R4I1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
Atxn7Q8R4I1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.73■■■■□ 3.79
Atxn7Q8R4I1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
Atxn7Q8R4I1 Gm23366-201ENSMUST00000175022 89 ntBASIC38.25■■■■□ 3.71
Atxn7Q8R4I1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
Atxn7Q8R4I1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Atxn7Q8R4I1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.47■■■■□ 3.59
Atxn7Q8R4I1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Atxn7Q8R4I1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.23■■■■□ 3.55
Atxn7Q8R4I1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.99■■■■□ 3.51
Atxn7Q8R4I1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.88■■■■□ 3.49
Atxn7Q8R4I1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Atxn7Q8R4I1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.79■■■■□ 3.48
Atxn7Q8R4I1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
Atxn7Q8R4I1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.68■■■■□ 3.46
Atxn7Q8R4I1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
Atxn7Q8R4I1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Atxn7Q8R4I1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Atxn7Q8R4I1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Atxn7Q8R4I1 Gm25238-201ENSMUST00000174914 89 ntBASIC36.3■■■■□ 3.4
Atxn7Q8R4I1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Atxn7Q8R4I1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
Atxn7Q8R4I1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Atxn7Q8R4I1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.24■■■■□ 3.39
Atxn7Q8R4I1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.19■■■■□ 3.38
Atxn7Q8R4I1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.93■■■■□ 3.34
Atxn7Q8R4I1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Atxn7Q8R4I1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.84■■■■□ 3.33
Atxn7Q8R4I1 Psd-208ENSMUST00000224556 2034 ntBASIC35.58■■■■□ 3.29
Atxn7Q8R4I1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.28
Atxn7Q8R4I1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.47■■■■□ 3.27
Atxn7Q8R4I1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
Atxn7Q8R4I1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.25■■■■□ 3.23
Atxn7Q8R4I1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Atxn7Q8R4I1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC35.2■■■■□ 3.23
Atxn7Q8R4I1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.04■■■■□ 3.2
Atxn7Q8R4I1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.02■■■■□ 3.2
Atxn7Q8R4I1 Gm27325-201ENSMUST00000175467 74 ntBASIC34.97■■■■□ 3.19
Atxn7Q8R4I1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
Atxn7Q8R4I1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Atxn7Q8R4I1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.82■■■■□ 3.16
Atxn7Q8R4I1 Gm25262-201ENSMUST00000174934 133 ntBASIC34.76■■■■□ 3.16
Atxn7Q8R4I1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Atxn7Q8R4I1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Atxn7Q8R4I1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Atxn7Q8R4I1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.49■■■■□ 3.11
Atxn7Q8R4I1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.41■■■■□ 3.1
Atxn7Q8R4I1 Rab21-202ENSMUST00000218831 843 ntBASIC34.41■■■■□ 3.1
Atxn7Q8R4I1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Atxn7Q8R4I1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Atxn7Q8R4I1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.39■■■■□ 3.1
Atxn7Q8R4I1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.32■■■■□ 3.08
Atxn7Q8R4I1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Atxn7Q8R4I1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
Atxn7Q8R4I1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.16■■■■□ 3.06
Atxn7Q8R4I1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Atxn7Q8R4I1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.12■■■■□ 3.05
Atxn7Q8R4I1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Atxn7Q8R4I1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.07■■■■□ 3.04
Atxn7Q8R4I1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.06■■■■□ 3.04
Atxn7Q8R4I1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Atxn7Q8R4I1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Atxn7Q8R4I1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.01■■■■□ 3.03
Atxn7Q8R4I1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Atxn7Q8R4I1 Gm26115-201ENSMUST00000175605 87 ntBASIC33.93■■■■□ 3.02
Atxn7Q8R4I1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC33.92■■■■□ 3.02
Atxn7Q8R4I1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Atxn7Q8R4I1 Gm8109-201ENSMUST00000194076 746 ntBASIC33.81■■■■□ 3
Atxn7Q8R4I1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Atxn7Q8R4I1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Atxn7Q8R4I1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
Atxn7Q8R4I1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Atxn7Q8R4I1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Atxn7Q8R4I1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Atxn7Q8R4I1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.71■■■□□ 2.99
Atxn7Q8R4I1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Atxn7Q8R4I1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
Atxn7Q8R4I1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.63■■■□□ 2.97
Atxn7Q8R4I1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33.57■■■□□ 2.96
Atxn7Q8R4I1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Atxn7Q8R4I1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Atxn7Q8R4I1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Atxn7Q8R4I1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.52■■■□□ 2.96
Atxn7Q8R4I1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Atxn7Q8R4I1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Atxn7Q8R4I1 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.41■■■□□ 2.94
Atxn7Q8R4I1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
Atxn7Q8R4I1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Atxn7Q8R4I1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Atxn7Q8R4I1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.3■■■□□ 2.92
Atxn7Q8R4I1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.29■■■□□ 2.92
Atxn7Q8R4I1 Gm42596-201ENSMUST00000196305 1958 ntBASIC33.26■■■□□ 2.91
Atxn7Q8R4I1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.25■■■□□ 2.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms