RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Scrn1Q9CZC8 414 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ercc4Q9QZD4 917 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 A0A1Y7VML8 143 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm44503E9PYU5 387 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ptpn20O55082 426 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ifnar1P33896 590 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 NntQ61941 1086 aaKnown RBP9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cracr2bQ80ZJ8 394 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ppfia2Q8BSS9 1257 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Morc2bQ8C5W4 1022 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Efcc1Q9JJF6 558 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 CenphQ9QYM8 241 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Sept3Q9Z1S5 350 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Igsf9bE9PZ19 1328 aa9.14□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Krt24A1L317 512 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Fbf1A2A870 1173 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cdh15P33146 784 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Slc30a9Q5IRJ6 567 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Mybpc2Q5XKE0 1136 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Mindy1Q76LS9 468 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 ApobrQ8VBT6 942 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Xrcc4Q924T3 326 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tmem192Q9CXT7 266 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Mss51Q9D5Z5 446 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Myo1hQ9D6A1 958 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 PfasQ5SUR0 1337 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cdhr2E9Q7P9 1308 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm28919A0A087WP35 240 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Abl1P00520 1123 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Myl1P05977 188 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Calm1P0DP26 149 aaKnown RBP9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Calm2P0DP27 149 aaKnown RBP9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Calm3P0DP28 149 aaKnown RBP9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tmem35bQ3U0Y2 150 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 SfswapQ3USH5 945 aaKnown RBP9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tmtc1Q3UV71 942 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Sh3gl2Q62420 352 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Cyp7a1Q64505 503 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 GypcQ78HU7 95 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Bicd1Q8BR07 835 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Anapc5Q8BTZ4 740 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tmem134Q8R0J4 195 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ndufab1Q9CR21 156 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 PdhbQ9D051 359 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Fsip1Q9D3V5 435 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 ThegQ9JMB1 375 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 AfdnQ9QZQ1 1820 aaKnown RBP9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 FAM186AQ9D9R9 1790 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Bcl9Q9D219 1425 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 AgtP11859 477 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Rnf216P58283 853 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gjb4Q02738 266 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Traf3ip1Q149C2 625 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Slc38a10Q5I012 1090 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 MycbpapQ5SUV2 932 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Jade2Q6ZQF7 829 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 BlmhQ8R016 455 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Q91WD4 421 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Apobec3Q99J72 440 aaKnown RBP9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Syce1Q9D495 329 aa9.13□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Unc13bQ9Z1N9 1602 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Znf609Q8BZ47 1413 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm15262A0A140LIQ5 728 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Prr16A3KMN5 304 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gfpt1P47856 697 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ezh2Q61188 746 aaKnown RBP9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Otop3Q80UF9 577 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Stkld1Q80YS9 662 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Pus7lQ8CE46 702 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Exoc1Q8R3S6 894 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Rpf2Q9JJ80 306 aaKnown RBP9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Psma7Q9Z2U0 248 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Abca15E9PWH4 1668 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 MeiocA2AG06 965 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Herc3A6H6S0 1050 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm4307E9PZY4 289 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm4312K9J7E2 289 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Nrg3O35181 713 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 PurbO35295 324 aaKnown RBP9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tcp1P11983 556 aaKnown RBP9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Pcp4l1Q6W8Q3 68 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Asic3Q6X1Y6 530 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Kdm1aQ6ZQ88 853 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Spag7Q7TNE3 227 aaKnown RBP9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Phf8Q80TJ7 1023 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Morc4Q8BMD7 928 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Triml1Q8BVP1 470 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 CgasQ8C6L5 507 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 PygbQ8CI94 843 aaKnown RBP9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Eif3hQ91WK2 352 aaKnown RBP9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ebag9Q9D0V7 213 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Kank3Q9Z1P7 791 aa9.12□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gm7347D3YYI9 267 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Fam186bD3Z420 943 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Zbtb7aO88939 569 aaKnown RBP9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Parp1P11103 1013 aaKnown RBP9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 PpardP35396 440 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Zfp781Q0P5U5 243 aa9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ddx3xQ62167 662 aaKnown RBP9.11□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Olfr118Q7TRJ6 321 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms