RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YGR126WP53274 230 aa2.41□□□□□ -2.02
BRO1YPL084W SMM1P53720 384 aaKnown RBP2.41□□□□□ -2.02
BRO1YPL084W YNL181WP53878 407 aa2.41□□□□□ -2.02
BRO1YPL084W YMR160WQ03823 816 aa2.41□□□□□ -2.02
BRO1YPL084W FIN1Q03898 291 aa2.41□□□□□ -2.02
BRO1YPL084W SCM3Q12334 223 aa2.41□□□□□ -2.02
BRO1YPL084W RTN2Q12443 393 aa2.41□□□□□ -2.02
BRO1YPL084W ERG3P32353 365 aa2.41□□□□□ -2.02
BRO1YPL084W MRE11P32829 692 aa2.41□□□□□ -2.02
BRO1YPL084W MFT1P33441 392 aaKnown RBP2.41□□□□□ -2.02
BRO1YPL084W PMT1P33775 817 aa2.41□□□□□ -2.02
BRO1YPL084W PCL6P40038 420 aa2.41□□□□□ -2.02
BRO1YPL084W JJJ1P53863 590 aa2.41□□□□□ -2.02
BRO1YPL084W TOF2Q02208 771 aa2.41□□□□□ -2.02
BRO1YPL084W MRD1Q06106 887 aaKnown RBP2.41□□□□□ -2.02
BRO1YPL084W RGT2Q12300 763 aa2.41□□□□□ -2.02
BRO1YPL084W GRX6Q12438 231 aa2.41□□□□□ -2.02
BRO1YPL084W SPA2P23201 1466 aaKnown RBP2.41□□□□□ -2.02
BRO1YPL084W GID7P25569 745 aa2.4□□□□□ -2.02
BRO1YPL084W ERG7P38604 731 aa2.4□□□□□ -2.02
BRO1YPL084W SMF1P38925 575 aa2.4□□□□□ -2.02
BRO1YPL084W RTS2P40962 232 aa2.4□□□□□ -2.02
BRO1YPL084W IAH1P41734 238 aa2.4□□□□□ -2.02
BRO1YPL084W VTC2P43585 828 aa2.4□□□□□ -2.02
BRO1YPL084W TWF1P53250 332 aa2.4□□□□□ -2.02
BRO1YPL084W YPL014WQ02606 381 aa2.4□□□□□ -2.02
BRO1YPL084W SMA1Q02651 245 aa2.4□□□□□ -2.02
BRO1YPL084W SHR3Q02774 210 aa2.4□□□□□ -2.02
BRO1YPL084W YMR155WQ03795 547 aa2.4□□□□□ -2.02
BRO1YPL084W SPC19Q03954 165 aa2.4□□□□□ -2.02
BRO1YPL084W YMR034CQ05131 434 aaPredicted RBP2.4□□□□□ -2.02
BRO1YPL084W SSK1Q07084 712 aa2.4□□□□□ -2.02
BRO1YPL084W ATG29Q12092 213 aa2.4□□□□□ -2.02
BRO1YPL084W NCE102Q12207 173 aaRIP-Chip data2.4□□□□□ -2.02not detected
BRO1YPL084W PGA3Q12746 312 aaKnown RBP2.4□□□□□ -2.02
BRO1YPL084W SUI2P20459 304 aaKnown RBP2.4□□□□□ -2.03
BRO1YPL084W ELO2P25358 347 aa2.4□□□□□ -2.03
BRO1YPL084W PRD1P25375 712 aa2.4□□□□□ -2.03
BRO1YPL084W MGR1P25573 417 aa2.4□□□□□ -2.03
BRO1YPL084W MCM4P30665 933 aaKnown RBP2.4□□□□□ -2.03
BRO1YPL084W SNC1P31109 117 aa2.4□□□□□ -2.03
BRO1YPL084W CMC1P36064 111 aa2.4□□□□□ -2.03
BRO1YPL084W LAG1P38703 411 aa2.4□□□□□ -2.03
BRO1YPL084W GPD2P41911 440 aaKnown RBP2.4□□□□□ -2.03
BRO1YPL084W STB2P46679 850 aa2.4□□□□□ -2.03
BRO1YPL084W SNA4Q07549 140 aa2.4□□□□□ -2.03
BRO1YPL084W PEP5P12868 1029 aa2.39□□□□□ -2.03
BRO1YPL084W RPS2P25443 254 aaKnown RBP2.39□□□□□ -2.03
BRO1YPL084W PHD1P36093 366 aa2.39□□□□□ -2.03
BRO1YPL084W YKL023WP36103 277 aaKnown RBP2.39□□□□□ -2.03
BRO1YPL084W BYE1P36106 594 aa2.39□□□□□ -2.03
BRO1YPL084W FET5P43561 622 aa2.39□□□□□ -2.03
BRO1YPL084W CAF130P53280 1122 aaPredicted RBP2.39□□□□□ -2.03
BRO1YPL084W BUD32P53323 261 aa2.39□□□□□ -2.03
BRO1YPL084W BET4Q00618 327 aa2.39□□□□□ -2.03
BRO1YPL084W DIG1Q03063 452 aaKnown RBP2.39□□□□□ -2.03
BRO1YPL084W YDR415CQ04033 374 aaPredicted RBP2.39□□□□□ -2.03
BRO1YPL084W PDS5Q04264 1277 aa2.39□□□□□ -2.03
BRO1YPL084W YMR254CQ04838 102 aa2.39□□□□□ -2.03
BRO1YPL084W MLH2Q07980 695 aa2.39□□□□□ -2.03
BRO1YPL084W DSE3Q08729 430 aa2.39□□□□□ -2.03
BRO1YPL084W BSC1Q12140 328 aa2.39□□□□□ -2.03
BRO1YPL084W YOL159C-AQ3E769 90 aa2.39□□□□□ -2.03
BRO1YPL084W YFL068WP0CX99 160 aa2.39□□□□□ -2.03
BRO1YPL084W YLL066W-AP0CY00 160 aa2.39□□□□□ -2.03
BRO1YPL084W YLL067W-AP0CY01 160 aa2.39□□□□□ -2.03
BRO1YPL084W NPL6P32832 435 aa2.39□□□□□ -2.03
BRO1YPL084W ATO2P32907 282 aa2.39□□□□□ -2.03
BRO1YPL084W MUM2P38236 366 aa2.39□□□□□ -2.03
BRO1YPL084W DIC1Q06143 298 aa2.39□□□□□ -2.03
BRO1YPL084W THP1Q08231 455 aa2.39□□□□□ -2.03
BRO1YPL084W SEC39Q12745 709 aa2.39□□□□□ -2.03
BRO1YPL084W YML133CQ03099 1374 aa2.39□□□□□ -2.03
BRO1YPL084W YLL067CQ07888 1374 aa2.39□□□□□ -2.03
BRO1YPL084W YLL066CQ99208 1374 aa2.39□□□□□ -2.03
BRO1YPL084W PEP4P07267 405 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W SGV1P23293 657 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W PAP1P29468 568 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W SAS3P34218 831 aa2.38□□□□□ -2.03
BRO1YPL084W SHP1P34223 423 aa2.38□□□□□ -2.03
BRO1YPL084W YHR210CP38893 341 aa2.38□□□□□ -2.03
BRO1YPL084W YIL152WP40455 235 aa2.38□□□□□ -2.03
BRO1YPL084W AXL1P40851 1208 aa2.38□□□□□ -2.03
BRO1YPL084W HXT14P42833 540 aa2.38□□□□□ -2.03
BRO1YPL084W AIM22P47051 409 aa2.38□□□□□ -2.03
BRO1YPL084W DRN1P53255 507 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W APL5Q08951 932 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W PDH1Q12428 516 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W YDL007C-AQ2V2Q0 85 aa2.38□□□□□ -2.03
BRO1YPL084W RAD52P06778 471 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W ARC40P38328 384 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W OTU2P38747 307 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W ALK1P43633 760 aaKnown RBP2.38□□□□□ -2.03
BRO1YPL084W RHO4Q00246 291 aa2.38□□□□□ -2.03
BRO1YPL084W SFI1Q12369 946 aa2.38□□□□□ -2.03
BRO1YPL084W COR1P07256 457 aa2.37□□□□□ -2.03
BRO1YPL084W RPL31BP0C2H9 113 aaKnown RBP2.37□□□□□ -2.03
BRO1YPL084W PRP2P20095 876 aaPredicted RBP2.37□□□□□ -2.03
BRO1YPL084W YCR043CP25361 127 aa2.37□□□□□ -2.03
BRO1YPL084W RAD24P32641 659 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms