RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeast

Gene RRP40, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP40	YOL142W	CDC15	P27636	974 aa		4.98	□□□□□ -1.61
RRP40	YOL142W	PEP3	P27801	918 aa		4.98	□□□□□ -1.61
RRP40	YOL142W	CHS3	P29465	1165 aa		4.98	□□□□□ -1.61
RRP40	YOL142W	SAC1	P32368	623 aa	Known RBP	4.98	□□□□□ -1.61
RRP40	YOL142W	CST26	P38226	397 aa		4.98	□□□□□ -1.61
RRP40	YOL142W	VRG4	P40107	337 aa		4.98	□□□□□ -1.61
RRP40	YOL142W	PGA3	Q12746	312 aa	Known RBP	4.98	□□□□□ -1.61
RRP40	YOL142W	GUK1	P15454	187 aa	Known RBP	4.97	□□□□□ -1.61
RRP40	YOL142W	CLB2	P24869	491 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	ANP1	P32629	500 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	SLC1	P33333	303 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	MET30	P39014	640 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	SPO22	P40511	975 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	MEP2	P41948	499 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	YTP1	P53584	459 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	MYO5	Q04439	1219 aa	Known RBP	4.97	□□□□□ -1.61
RRP40	YOL142W	UTP21	Q06078	939 aa	Predicted RBP	4.97	□□□□□ -1.61
RRP40	YOL142W	MRD1	Q06106	887 aa	Known RBP	4.97	□□□□□ -1.61
RRP40	YOL142W	MCP2	Q06567	569 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	NUS1	Q12063	375 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	RIF1	P29539	1916 aa		4.97	□□□□□ -1.61
RRP40	YOL142W	TPM1	P17536	199 aa	Known RBP	4.96	□□□□□ -1.62
RRP40	YOL142W	IMP2'	P32351	346 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	AXL2	P38928	823 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	YIL169C	P40442	995 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	CSM2	P40465	213 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	YIR014W	P40570	242 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	IME4	P41833	600 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	IML2	P47031	731 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	SGF73	P53165	657 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	IST1	P53843	298 aa	Predicted RBP	4.96	□□□□□ -1.62
RRP40	YOL142W	ESBP6	P53918	673 aa		4.96	□□□□□ -1.62
RRP40	YOL142W	DIG1	Q03063	452 aa	Known RBP	4.96	□□□□□ -1.62
RRP40	YOL142W	RPB2	P08518	1224 aa	Known RBP	4.95	□□□□□ -1.62
RRP40	YOL142W	MAK31	P23059	88 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	MRP20	P32387	263 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	YER010C	P40011	234 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	SEC24	P40482	926 aa	Known RBP	4.95	□□□□□ -1.62
RRP40	YOL142W	STB2	P46679	850 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	BET4	Q00618	327 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	RBA50	Q04418	439 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	ARP10	Q04549	284 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	RCO1	Q04779	684 aa		4.95	□□□□□ -1.62
RRP40	YOL142W	HXK2	P04807	486 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	RNR2	P09938	399 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	KRS1	P15180	591 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	SAM2	P19358	384 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	APE3	P37302	537 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	PES4	P39684	611 aa		4.94	□□□□□ -1.62
RRP40	YOL142W	KAP123	P40069	1113 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	PKP1	P40530	394 aa		4.94	□□□□□ -1.62
RRP40	YOL142W	HXT9	P40885	567 aa		4.94	□□□□□ -1.62
RRP40	YOL142W	RPT6	Q01939	405 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	SNO4	Q04902	237 aa		4.94	□□□□□ -1.62
RRP40	YOL142W	YOL159C	Q08300	171 aa		4.94	□□□□□ -1.62
RRP40	YOL142W	HSP33	Q08914	237 aa	Known RBP	4.94	□□□□□ -1.62
RRP40	YOL142W	HSP32	Q08992	237 aa		4.94	□□□□□ -1.62
RRP40	YOL142W	YBR085C-A	O43137	85 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	NNF2	P53253	936 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	YNL234W	P53857	426 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	YNL181W	P53878	407 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	YML131W	Q03102	365 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	YML037C	Q03703	340 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	ATG9	Q12142	997 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	YOR111W	Q99210	232 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	YOL087C	Q99247	1116 aa		4.93	□□□□□ -1.62
RRP40	YOL142W	MATALPHA2	P0CY08	210 aa		4.92	□□□□□ -1.62
RRP40	YOL142W	HMLALPHA2	P0CY09	210 aa		4.92	□□□□□ -1.62
RRP40	YOL142W	PHO88	P38264	188 aa	Predicted RBP	4.92	□□□□□ -1.62
RRP40	YOL142W	FMP10	P40098	244 aa		4.92	□□□□□ -1.62
RRP40	YOL142W	LYS14	P40971	790 aa		4.92	□□□□□ -1.62
RRP40	YOL142W	PIL1	P53252	339 aa	Known RBP	4.92	□□□□□ -1.62
RRP40	YOL142W	MUB1	Q03162	620 aa		4.92	□□□□□ -1.62
RRP40	YOL142W	CTL1	Q03220	320 aa	Known RBP	4.92	□□□□□ -1.62
RRP40	YOL142W	YMR254C	Q04838	102 aa		4.92	□□□□□ -1.62
RRP40	YOL142W	YLR281C	Q05863	155 aa		4.92	□□□□□ -1.62
RRP40	YOL142W	APL5	Q08951	932 aa	Known RBP	4.92	□□□□□ -1.62
RRP40	YOL142W	TRX2	P22803	104 aa	Known RBP	4.91	□□□□□ -1.62
RRP40	YOL142W	CBF2	P32504	956 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	GCS1	P35197	352 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	RRN3	P36070	627 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	ALY1	P36117	915 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	EFM2	P38347	419 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	ERG7	P38604	731 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	VAB2	P40003	282 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	SLZ1	P40167	298 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	DPB11	P47027	764 aa	Predicted RBP	4.91	□□□□□ -1.62
RRP40	YOL142W	SOL4	P53315	255 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	YMR178W	Q03219	274 aa	Known RBP	4.91	□□□□□ -1.62
RRP40	YOL142W	SUE1	Q06524	206 aa		4.91	□□□□□ -1.62
RRP40	YOL142W	NEW1	Q08972	1196 aa	Known RBP	4.91	□□□□□ -1.62
RRP40	YOL142W	CFT2	Q12102	859 aa	Predicted RBP	4.91	□□□□□ -1.62
RRP40	YOL142W	UBR2	Q07963	1872 aa		4.9	□□□□□ -1.62
RRP40	YOL142W	VPS13	Q07878	3144 aa		4.9	□□□□□ -1.63
RRP40	YOL142W	RPB8	P20436	146 aa		4.9	□□□□□ -1.63
RRP40	YOL142W	CDC60	P26637	1090 aa	Known RBP	4.9	□□□□□ -1.63
RRP40	YOL142W	PDR3	P33200	976 aa		4.9	□□□□□ -1.63
RRP40	YOL142W	YPK3	P38070	525 aa		4.9	□□□□□ -1.63
RRP40	YOL142W	VPS45	P38932	577 aa		4.9	□□□□□ -1.63
RRP40	YOL142W	YND1	P40009	630 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms