RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W RSM10Q03201 203 aa10.31□□□□□ -0.76
PRE6YOL038W CSN9Q03981 162 aa10.31□□□□□ -0.76
PRE6YOL038W HAL9Q12180 1030 aa10.31□□□□□ -0.76
PRE6YOL038W YOR114WQ12219 294 aa10.31□□□□□ -0.76
PRE6YOL038W BCY1P07278 416 aaKnown RBP10.3□□□□□ -0.76
PRE6YOL038W ARG1P22768 420 aa10.3□□□□□ -0.76
PRE6YOL038W RIM1P32445 135 aaKnown RBP10.3□□□□□ -0.76
PRE6YOL038W NUP120P35729 1037 aa10.3□□□□□ -0.76
PRE6YOL038W YHR210CP38893 341 aa10.3□□□□□ -0.76
PRE6YOL038W YIL086CP40503 102 aa10.3□□□□□ -0.76
PRE6YOL038W YMR209CQ03648 457 aa10.3□□□□□ -0.76
PRE6YOL038W NOP6Q07623 225 aaKnown RBP10.3□□□□□ -0.76
PRE6YOL038W LAG2Q92325 660 aa10.3□□□□□ -0.76
PRE6YOL038W SFA1P32771 386 aa10.29□□□□□ -0.76
PRE6YOL038W OLA1P38219 394 aaKnown RBP10.29□□□□□ -0.76
PRE6YOL038W FTH1P38310 465 aa10.29□□□□□ -0.76
PRE6YOL038W CEP3P40969 608 aa10.29□□□□□ -0.76
PRE6YOL038W TFG1P41895 735 aaPredicted RBP10.29□□□□□ -0.76
PRE6YOL038W ZIP2P53061 704 aa10.29□□□□□ -0.76
PRE6YOL038W KTR5P53966 522 aaPredicted RBP10.29□□□□□ -0.76
PRE6YOL038W RRN11Q04712 507 aa10.29□□□□□ -0.76
PRE6YOL038W VAM6Q07468 1049 aa10.29□□□□□ -0.76
PRE6YOL038W YPL247CQ12523 523 aa10.29□□□□□ -0.76
PRE6YOL038W CLB1P24868 471 aa10.28□□□□□ -0.76
PRE6YOL038W PRO1P32264 428 aa10.28□□□□□ -0.76
PRE6YOL038W MGS1P40151 587 aa10.28□□□□□ -0.76
PRE6YOL038W MEP1P40260 492 aa10.28□□□□□ -0.76
PRE6YOL038W YJR149WP47177 404 aa10.28□□□□□ -0.76
PRE6YOL038W YMR034CQ05131 434 aaPredicted RBP10.28□□□□□ -0.76
PRE6YOL038W NUR1Q12066 484 aa10.28□□□□□ -0.76
PRE6YOL038W MCD1Q12158 566 aa10.28□□□□□ -0.76
PRE6YOL038W GCY1P14065 312 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77not detected
PRE6YOL038W DMA1P38823 416 aa10.27□□□□□ -0.77
PRE6YOL038W GGC1P38988 300 aa10.27□□□□□ -0.77
PRE6YOL038W MET30P39014 640 aa10.27□□□□□ -0.77
PRE6YOL038W TRM9P49957 279 aa10.27□□□□□ -0.77
PRE6YOL038W ELP4Q02884 456 aaKnown RBP10.27□□□□□ -0.77
PRE6YOL038W YLR177WQ06251 628 aa10.27□□□□□ -0.77
PRE6YOL038W ATG29Q12092 213 aa10.27□□□□□ -0.77
PRE6YOL038W CHS5Q12114 671 aaKnown RBP10.27□□□□□ -0.77
PRE6YOL038W MDY2Q12285 212 aa10.27□□□□□ -0.77
PRE6YOL038W SSC1P0CS90 654 aaKnown RBP10.26□□□□□ -0.77
PRE6YOL038W AMD2P22580 549 aa10.26□□□□□ -0.77
PRE6YOL038W EHT1P38295 451 aa10.26□□□□□ -0.77
PRE6YOL038W BEM4P39011 633 aa10.26□□□□□ -0.77
PRE6YOL038W DHH1P39517 506 aaKnown RBP10.26□□□□□ -0.77
PRE6YOL038W FAU1P40099 211 aa10.26□□□□□ -0.77
PRE6YOL038W SMX2P40204 77 aaKnown RBP10.26□□□□□ -0.77
PRE6YOL038W ELP2P42935 788 aa10.26□□□□□ -0.77
PRE6YOL038W YJR030CP47101 745 aa10.26□□□□□ -0.77
PRE6YOL038W KXD1P53158 218 aa10.26□□□□□ -0.77
PRE6YOL038W BIO4P53630 237 aa10.26□□□□□ -0.77
PRE6YOL038W SHR3Q02774 210 aa10.26□□□□□ -0.77
PRE6YOL038W BCH1Q05029 724 aa10.26□□□□□ -0.77
PRE6YOL038W IRC13Q08630 104 aa10.26□□□□□ -0.77
PRE6YOL038W MSL5Q12186 476 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
PRE6YOL038W RGT2Q12300 763 aa10.26□□□□□ -0.77
PRE6YOL038W PNO1Q99216 274 aaKnown RBP10.26□□□□□ -0.77
PRE6YOL038W AI4P03878 556 aa10.25□□□□□ -0.77
PRE6YOL038W RPL17AP05740 184 aaKnown RBP10.25□□□□□ -0.77
PRE6YOL038W STE3P06783 470 aa10.25□□□□□ -0.77
PRE6YOL038W LDB16P25587 256 aa10.25□□□□□ -0.77
PRE6YOL038W SKT5P34226 696 aa10.25□□□□□ -0.77
PRE6YOL038W SEF1P34228 1148 aa10.25□□□□□ -0.77
PRE6YOL038W GIC1P38785 314 aa10.25□□□□□ -0.77
PRE6YOL038W MTG2P38860 518 aa10.25□□□□□ -0.77
PRE6YOL038W MNL1P38888 796 aa10.25□□□□□ -0.77
PRE6YOL038W CCT2P39076 527 aaKnown RBP10.25□□□□□ -0.77
PRE6YOL038W NDE1P40215 560 aa10.25□□□□□ -0.77
PRE6YOL038W SEC27P41811 889 aaKnown RBP10.25□□□□□ -0.77
PRE6YOL038W MIC19P43594 170 aa10.25□□□□□ -0.77
PRE6YOL038W RPL17BP46990 184 aaKnown RBP10.25□□□□□ -0.77
PRE6YOL038W MRS2Q01926 470 aa10.25□□□□□ -0.77
PRE6YOL038W PEX25Q02969 394 aa10.25□□□□□ -0.77
PRE6YOL038W ROY1Q04847 553 aa10.25□□□□□ -0.77
PRE6YOL038W RIF2Q06208 395 aa10.25□□□□□ -0.77
PRE6YOL038W RAD34Q06665 692 aa10.25□□□□□ -0.77
PRE6YOL038W YPL066WQ12194 479 aa10.25□□□□□ -0.77
PRE6YOL038W KCS1Q12494 1050 aa10.25□□□□□ -0.77
PRE6YOL038W RGS2Q99188 309 aa10.25□□□□□ -0.77
PRE6YOL038W CDC8P00572 216 aa10.24□□□□□ -0.77
PRE6YOL038W ILV2P07342 687 aaKnown RBP10.24□□□□□ -0.77
PRE6YOL038W RPS21AP0C0V8 87 aaKnown RBP10.24□□□□□ -0.77
PRE6YOL038W ADH4P10127 382 aa10.24□□□□□ -0.77
PRE6YOL038W GUK1P15454 187 aaKnown RBP10.24□□□□□ -0.77
PRE6YOL038W KKQ8P36004 724 aa10.24□□□□□ -0.77
PRE6YOL038W RPC37P36121 282 aa10.24□□□□□ -0.77
PRE6YOL038W MRPL15P36523 253 aa10.24□□□□□ -0.77
PRE6YOL038W CTP1P38152 299 aa10.24□□□□□ -0.77
PRE6YOL038W SSP120P39931 234 aaKnown RBP10.24□□□□□ -0.77
PRE6YOL038W PTC2P39966 464 aaKnown RBP10.24□□□□□ -0.77
PRE6YOL038W EMP65P40085 556 aa10.24□□□□□ -0.77
PRE6YOL038W PEP8P40335 379 aa10.24□□□□□ -0.77
PRE6YOL038W SEC28P40509 296 aaKnown RBP10.24□□□□□ -0.77
PRE6YOL038W GCD14P46959 383 aaPredicted RBP10.24□□□□□ -0.77
PRE6YOL038W IKS1P47042 667 aa10.24□□□□□ -0.77
PRE6YOL038W PRP31P49704 494 aaPredicted RBP10.24□□□□□ -0.77
PRE6YOL038W MDM34P53083 459 aa10.24□□□□□ -0.77
PRE6YOL038W SED5Q01590 340 aa10.24□□□□□ -0.77
PRE6YOL038W HXT4P32467 576 aa10.23□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms