RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	BMH2	P34730	273 aa	Known RBP	3.15	□□□□□ -1.91
ATG3	YNR007C	AAP1	P37898	856 aa	Known RBP	3.15	□□□□□ -1.91
ATG3	YNR007C	RXT2	P38255	430 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	ERC1	P38767	581 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	AFG3	P39925	761 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	TPA1	P40032	644 aa	Known RBP	3.15	□□□□□ -1.91
ATG3	YNR007C	SAD1	P43589	448 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	SGM1	P47166	707 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	VID30	P53076	958 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	RTC4	P53850	401 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	TMA64	Q04600	565 aa	Known RBP	3.15	□□□□□ -1.91
ATG3	YNR007C	YLR281C	Q05863	155 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	TFC6	Q06339	672 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	PSK2	Q08217	1101 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	NKP1	Q12493	238 aa		3.15	□□□□□ -1.91
ATG3	YNR007C	TPK1	P06244	397 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	MAS2	P11914	482 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	RER1	P25560	188 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	LRE1	P25579	583 aa	Known RBP	3.14	□□□□□ -1.91
ATG3	YNR007C	URK1	P27515	501 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	TEF4	P36008	412 aa	Known RBP	3.14	□□□□□ -1.91
ATG3	YNR007C	RRN3	P36070	627 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	DBP7	P36120	742 aa	Known RBP	3.14	□□□□□ -1.91
ATG3	YNR007C	RKM3	P38222	552 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
ATG3	YNR007C	VRG4	P40107	337 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	ZAP1	P47043	880 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	PIB2	P53191	635 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	CSL4	P53859	292 aa	Predicted RBP	3.14	□□□□□ -1.91
ATG3	YNR007C	ARP5	P53946	755 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	YMR317W	Q04893	1140 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	BAG7	Q12128	409 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	TIP41	Q12199	356 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	NBL1	Q3E7Y6	73 aa		3.14	□□□□□ -1.91
ATG3	YNR007C	ECM29	P38737	1868 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	RPL42A	P0CX27	106 aa	Known RBP	3.13	□□□□□ -1.91
ATG3	YNR007C	RPL42B	P0CX28	106 aa	Known RBP	3.13	□□□□□ -1.91
ATG3	YNR007C	PRO3	P32263	286 aa	Known RBP	3.13	□□□□□ -1.91
ATG3	YNR007C	SKG6	P32900	734 aa	Predicted RBP	3.13	□□□□□ -1.91
ATG3	YNR007C	SLC1	P33333	303 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	SHP1	P34223	423 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	PHM8	P40025	321 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	YIL161W	P40449	235 aa	Known RBP	3.13	□□□□□ -1.91
ATG3	YNR007C	DJP1	P40564	432 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	IST3	P40565	148 aa	Predicted RBP	3.13	□□□□□ -1.91
ATG3	YNR007C	VPS25	P47142	202 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	ASE1	P50275	885 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	SHE10	P53075	577 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	RET3	P53600	189 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	YNL134C	P53912	376 aa	Known RBP	3.13	□□□□□ -1.91
ATG3	YNR007C	BET4	Q00618	327 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	VPS72	Q03388	795 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	VID22	Q05934	901 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	PDR8	Q06149	701 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	SWT1	Q12104	458 aa		3.13	□□□□□ -1.91
ATG3	YNR007C	ATP2	P00830	511 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	SNF1	P06782	633 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	NOP1	P15646	327 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	THR4	P16120	514 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	PPZ1	P26570	692 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	CNS1	P33313	385 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	HES1	P35843	434 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	FMP46	P36141	133 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	IFA38	P38286	347 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	VPS41	P38959	992 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	YER010C	P40011	234 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	PCL6	P40038	420 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	RIC1	P40395	1056 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	ESL1	P40456	1118 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	UBX6	P47049	396 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	RPS7B	P48164	190 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	PSP1	P50896	841 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	TAM41	P53230	385 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	ART5	P53244	586 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	YPR003C	P53394	754 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	DIG1	Q03063	452 aa	Known RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	YMR018W	Q04364	514 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	YMR321C	Q04898	105 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	YDL121C	Q07541	149 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	GPN2	Q08726	347 aa	Predicted RBP	3.12	□□□□□ -1.91
ATG3	YNR007C	NBP2	Q12163	236 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	COX17	Q12287	69 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	ARP6	Q12509	438 aa		3.12	□□□□□ -1.91
ATG3	YNR007C	RNR2	P09938	399 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-LR1	P0C2J4	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-F	P0CX61	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-GR2	P0CX62	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	MATALPHA2	P0CY08	210 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	HMLALPHA2	P0CY09	210 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	TCP1	P12612	559 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	SRP54	P20424	541 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	TY2A-C	P25383	438 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	RPC53	P25441	422 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	LAC1	P28496	418 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	CBF2	P32504	956 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	VPH1	P32563	840 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	TFC3	P34111	1160 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	YKL023W	P36103	277 aa	Known RBP	3.11	□□□□□ -1.91
ATG3	YNR007C	CDC1	P40986	491 aa		3.11	□□□□□ -1.91
ATG3	YNR007C	BNA1	P47096	177 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms