RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W MUS81Q04149 632 aaPredicted RBP3.97□□□□□ -1.77
PUB1YNL016W ECM18Q04623 453 aa3.97□□□□□ -1.77
PUB1YNL016W ATG38Q05789 226 aaKnown RBP3.97□□□□□ -1.77
PUB1YNL016W YSH1Q06224 779 aaPredicted RBP3.97□□□□□ -1.77
PUB1YNL016W MCP2Q06567 569 aa3.97□□□□□ -1.77
PUB1YNL016W PLP2Q12017 286 aa3.97□□□□□ -1.77
PUB1YNL016W AIM41Q12032 185 aa3.97□□□□□ -1.77
PUB1YNL016W UBX3Q12229 455 aa3.97□□□□□ -1.77
PUB1YNL016W RIB2Q12362 591 aaKnown RBP3.97□□□□□ -1.77
PUB1YNL016W YOR019WQ99248 730 aa3.97□□□□□ -1.77
PUB1YNL016W GCD1P09032 578 aaPredicted RBP3.96□□□□□ -1.78
PUB1YNL016W RPS4AP0CX35 261 aaKnown RBP3.96□□□□□ -1.78
PUB1YNL016W RPS4BP0CX36 261 aaKnown RBP3.96□□□□□ -1.78
PUB1YNL016W CHS2P14180 963 aa3.96□□□□□ -1.78
PUB1YNL016W BUD5P25300 642 aaPredicted RBP3.96□□□□□ -1.78
PUB1YNL016W PRE2P30656 287 aaKnown RBP3.96□□□□□ -1.78
PUB1YNL016W PRO3P32263 286 aaKnown RBP3.96□□□□□ -1.78
PUB1YNL016W MRE11P32829 692 aa3.96□□□□□ -1.78
PUB1YNL016W YUH1P35127 236 aa3.96□□□□□ -1.78
PUB1YNL016W ATG19P35193 415 aa3.96□□□□□ -1.78
PUB1YNL016W COS111P38308 924 aa3.96□□□□□ -1.78
PUB1YNL016W CRG1P38892 291 aaRIP-Chip data3.96□□□□□ -1.78not detected
PUB1YNL016W AKR1P39010 764 aa3.96□□□□□ -1.78
PUB1YNL016W ECM1P39715 212 aa3.96□□□□□ -1.78
PUB1YNL016W PZF1P39933 429 aa3.96□□□□□ -1.78
PUB1YNL016W ALD5P40047 520 aaKnown RBP3.96□□□□□ -1.78
PUB1YNL016W YNL195CP40168 261 aa3.96□□□□□ -1.78
PUB1YNL016W IME4P41833 600 aa3.96□□□□□ -1.78
PUB1YNL016W EPL1P43572 832 aa3.96□□□□□ -1.78
PUB1YNL016W CTK2P46962 323 aa3.96□□□□□ -1.78
PUB1YNL016W SMC3P47037 1230 aa3.96□□□□□ -1.78
PUB1YNL016W PET130P47065 347 aa3.96□□□□□ -1.78
PUB1YNL016W CUE3P53137 624 aaKnown RBP3.96□□□□□ -1.78
PUB1YNL016W LSB1P53281 241 aa3.96□□□□□ -1.78
PUB1YNL016W BOP3P53958 396 aa3.96□□□□□ -1.78
PUB1YNL016W INA17Q02888 182 aa3.96□□□□□ -1.78
PUB1YNL016W VPS38Q05919 439 aa3.96□□□□□ -1.78
PUB1YNL016W RRT8Q08219 342 aa3.96□□□□□ -1.78
PUB1YNL016W DCI1Q08558 271 aa3.96□□□□□ -1.78
PUB1YNL016W VPS54Q12071 889 aa3.96□□□□□ -1.78
PUB1YNL016W AVL9Q12500 764 aa3.96□□□□□ -1.78
PUB1YNL016W TFB5Q3E7C1 72 aaPredicted RBP3.96□□□□□ -1.78
PUB1YNL016W SEN1Q00416 2231 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W RPL6BP05739 176 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W TPK2P06245 380 aa3.95□□□□□ -1.78
PUB1YNL016W TUP1P16649 713 aa3.95□□□□□ -1.78
PUB1YNL016W COQ1P18900 473 aa3.95□□□□□ -1.78
PUB1YNL016W ERG6P25087 383 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W KIN82P25341 720 aa3.95□□□□□ -1.78
PUB1YNL016W YIH1P25637 258 aa3.95□□□□□ -1.78
PUB1YNL016W SRB5P32585 307 aa3.95□□□□□ -1.78
PUB1YNL016W WBP1P33767 430 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W PMT1P33775 817 aa3.95□□□□□ -1.78
PUB1YNL016W SLM4P38247 162 aa3.95□□□□□ -1.78
PUB1YNL016W SAF1P38352 637 aa3.95□□□□□ -1.78
PUB1YNL016W STB5P38699 743 aa3.95□□□□□ -1.78
PUB1YNL016W DED81P38707 554 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W WSS1P38838 269 aa3.95□□□□□ -1.78
PUB1YNL016W YJL206CP39529 758 aa3.95□□□□□ -1.78
PUB1YNL016W HXT14P42833 540 aa3.95□□□□□ -1.78
PUB1YNL016W CTR1P49573 406 aa3.95□□□□□ -1.78
PUB1YNL016W FMS1P50264 508 aa3.95□□□□□ -1.78
PUB1YNL016W YGL036WP53185 909 aaPredicted RBP3.95□□□□□ -1.78
PUB1YNL016W DCP2P53550 970 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W RPL6AQ02326 176 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W VPS20Q04272 221 aa3.95□□□□□ -1.78
PUB1YNL016W RBS1Q05672 457 aaKnown RBP3.95□□□□□ -1.78
PUB1YNL016W VTA1Q06263 330 aa3.95□□□□□ -1.78
PUB1YNL016W SUE1Q06524 206 aa3.95□□□□□ -1.78
PUB1YNL016W PFK27Q12471 397 aaPredicted RBP3.95□□□□□ -1.78
PUB1YNL016W NBL1Q3E7Y6 73 aa3.95□□□□□ -1.78
PUB1YNL016W YIL002W-AQ3E7Z5 69 aa3.95□□□□□ -1.78
PUB1YNL016W CHO2P05374 869 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W YML003WP0CF16 290 aa3.94□□□□□ -1.78
PUB1YNL016W CUP1-1P0CX80 61 aa3.94□□□□□ -1.78
PUB1YNL016W CUP1-2P0CX81 61 aa3.94□□□□□ -1.78
PUB1YNL016W TAL1P15019 335 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W MER1P16523 270 aa3.94□□□□□ -1.78
PUB1YNL016W EST1P17214 699 aaPredicted RBP3.94□□□□□ -1.78
PUB1YNL016W CRM1P30822 1084 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W DCG1P32460 244 aa3.94□□□□□ -1.78
PUB1YNL016W HXT3P32466 567 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W PDB1P32473 366 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W RML2P32611 393 aa3.94□□□□□ -1.78
PUB1YNL016W YME2P32843 850 aa3.94□□□□□ -1.78
PUB1YNL016W PIM1P36775 1133 aa3.94□□□□□ -1.78
PUB1YNL016W RFC5P38251 354 aa3.94□□□□□ -1.78
PUB1YNL016W EHT1P38295 451 aa3.94□□□□□ -1.78
PUB1YNL016W YHR112CP38716 378 aa3.94□□□□□ -1.78
PUB1YNL016W YHL017WP38745 532 aa3.94□□□□□ -1.78
PUB1YNL016W NDT80P38830 627 aa3.94□□□□□ -1.78
PUB1YNL016W SEC24P40482 926 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W ELP2P42935 788 aa3.94□□□□□ -1.78
PUB1YNL016W LOC1P43586 204 aaPredicted RBP3.94□□□□□ -1.78
PUB1YNL016W EFM3P47163 339 aa3.94□□□□□ -1.78
PUB1YNL016W RPS7BP48164 190 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W COS12P53053 380 aa3.94□□□□□ -1.78
PUB1YNL016W STR3P53101 465 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W RHO5P53879 331 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W MTG1Q03151 367 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms