RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	ADY3	Q07732	790 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	GPR1	Q12361	961 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	ZRT2	Q12436	422 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	SEC39	Q12745	709 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	RNA1	P11745	407 aa	Known RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	PET123	P17558	318 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	SYP1	P25623	870 aa	Known RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	YHR182W	P38870	785 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	SPG5	P42933	373 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	YJL107C	P42947	387 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	YJR120W	P47157	116 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	ARE2	P53629	642 aa	Known RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	ZRG17	P53735	605 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	CTK1	Q03957	528 aa	Known RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	URH1	Q04179	340 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	SML1	Q04964	104 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	VTA1	Q06263	330 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	ACM1	Q08981	209 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	MDM12	Q92328	271 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
ATM1	YMR301C	MSB1	P21339	1137 aa	Known RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	PHO3	P24031	467 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	MSH1	P25846	959 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	MKK2	P32491	506 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	PET309	P32522	965 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	GDA1	P32621	518 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	DOM34	P33309	386 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	EMC3	P36039	253 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	MAK5	P38112	773 aa	Predicted RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	MCM7	P38132	845 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	LYS1	P38998	373 aa	RIP-Chip data	4.61	□□□□□ -1.67	RIP-Chip
ATM1	YMR301C	YGL176C	P46945	554 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	YGR266W	P53326	701 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	BLS1	Q06071	122 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	RSC3	Q06639	885 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	GTT2	Q12390	233 aa		4.61	□□□□□ -1.67
ATM1	YMR301C	RRP12	Q12754	1228 aa	Known RBP	4.61	□□□□□ -1.67
ATM1	YMR301C	TY4B-P	A0A0B7P3V8	1104 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	SEM1	O94742	89 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	SEC15	P22224	910 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	YCR006C	P25350	157 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	ATP11	P32453	318 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	SKN1	P33336	771 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	MTC2	P34246	357 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	PEX5	P35056	612 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	NTR2	P36118	322 aa	Predicted RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	YBR071W	P38243	211 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	UBA4	P38820	440 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	RIX1	P38883	763 aa	Predicted RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	PPT1	P53043	513 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	MAL11	P53048	616 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	UTP6	Q02354	440 aa	Known RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	DIC1	Q06143	298 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	GUP2	Q08929	609 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	UPC2	Q12151	913 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	GLE1	Q12315	538 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	TY4A-H	Q6Q5P6	413 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	HBN1	Q96VH4	193 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	HRP1	Q99383	534 aa	Known RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	PHO5	P00635	467 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	TEF1	P02994	458 aa	Known RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	YML002W	P0CF17	737 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	HSC82	P15108	705 aa	Known RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	URA10	P30402	227 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	TPS2	P31688	896 aa	Known RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	LRG1	P35688	1017 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	BAP2	P38084	609 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	YSW1	P38280	609 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	MBP1	P39678	833 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	PFA3	P42836	336 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	AAD14	P42884	376 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	RHO3	Q00245	231 aa	Known RBP	4.6	□□□□□ -1.67
ATM1	YMR301C	AAT1	Q01802	451 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	YDR109C	Q04585	715 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	FRE7	Q12333	620 aa		4.6	□□□□□ -1.67
ATM1	YMR301C	HEM13	P11353	328 aa	Known RBP	4.59	□□□□□ -1.67
ATM1	YMR301C	CBF1	P17106	351 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	HOP1	P20050	605 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	HOG1	P32485	435 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	RPF2	P36160	344 aa	Known RBP	4.59	□□□□□ -1.67
ATM1	YMR301C	YHR033W	P38690	423 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	PLB1	P39105	664 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	GIM4	P40005	111 aa	Known RBP	4.59	□□□□□ -1.67
ATM1	YMR301C	UTP18	P40362	594 aa	Predicted RBP	4.59	□□□□□ -1.67
ATM1	YMR301C	NMD5	P46970	1048 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	HNT2	P49775	206 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	SGF73	P53165	657 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	COG6	P53959	839 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	SIZ1	Q04195	904 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	YOR012W	Q12351	137 aa		4.59	□□□□□ -1.67
ATM1	YMR301C	CMD1	P06787	147 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	URA7	P28274	579 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	TIP20	P33891	701 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	RRP1	P35178	278 aa	Predicted RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	FMP46	P36141	133 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	TRM7	P38238	310 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	YHI9	P38765	294 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	GAT1	P43574	510 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	UBX4	P54730	416 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	TRS23	Q03784	219 aa		4.58	□□□□□ -1.68

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