RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YCR061WP25639 631 aa3.33□□□□□ -1.88
SDO1YLR022C MFT1P33441 392 aaKnown RBP3.33□□□□□ -1.88
SDO1YLR022C ASK1P35734 292 aa3.33□□□□□ -1.88
SDO1YLR022C FTH1P38310 465 aa3.33□□□□□ -1.88
SDO1YLR022C HEM14P40012 539 aa3.33□□□□□ -1.88
SDO1YLR022C CFD1P40558 293 aa3.33□□□□□ -1.88
SDO1YLR022C PEX8P53248 589 aa3.33□□□□□ -1.88
SDO1YLR022C CAF130P53280 1122 aaPredicted RBP3.33□□□□□ -1.88
SDO1YLR022C SCW4P53334 386 aaKnown RBP3.33□□□□□ -1.88
SDO1YLR022C NCS2P53923 493 aaPredicted RBP3.33□□□□□ -1.88
SDO1YLR022C YNL058CP53947 316 aa3.33□□□□□ -1.88
SDO1YLR022C TRM82Q03774 444 aa3.33□□□□□ -1.88
SDO1YLR022C SNU56Q03782 492 aaKnown RBP3.33□□□□□ -1.88
SDO1YLR022C MCP2Q06567 569 aa3.33□□□□□ -1.88
SDO1YLR022C YDR061WQ12298 539 aa3.33□□□□□ -1.88
SDO1YLR022C DBP10Q12389 995 aaKnown RBP3.33□□□□□ -1.88
SDO1YLR022C POL2P21951 2222 aaKnown RBP3.32□□□□□ -1.88
SDO1YLR022C RRP43P25359 394 aaPredicted RBP3.32□□□□□ -1.88
SDO1YLR022C BEM1P29366 551 aa3.32□□□□□ -1.88
SDO1YLR022C TKL2P33315 681 aa3.32□□□□□ -1.88
SDO1YLR022C MPE1P35728 441 aaKnown RBP3.32□□□□□ -1.88
SDO1YLR022C YKL050CP35736 922 aa3.32□□□□□ -1.88
SDO1YLR022C KES1P35844 434 aaKnown RBP3.32□□□□□ -1.88
SDO1YLR022C MRPL40P36534 297 aa3.32□□□□□ -1.88
SDO1YLR022C SHE3P38272 425 aaKnown RBP3.32□□□□□ -1.88
SDO1YLR022C ERC1P38767 581 aa3.32□□□□□ -1.88
SDO1YLR022C SHQ1P40486 507 aaPredicted RBP3.32□□□□□ -1.88
SDO1YLR022C IRC7P43623 340 aa3.32□□□□□ -1.88
SDO1YLR022C SCD6P45978 349 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SDO1YLR022C IDS2P46958 469 aa3.32□□□□□ -1.88
SDO1YLR022C AIM23P47015 356 aa3.32□□□□□ -1.88
SDO1YLR022C FLC3P53121 802 aa3.32□□□□□ -1.88
SDO1YLR022C NOP13P53883 403 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SDO1YLR022C AQR1P53943 586 aa3.32□□□□□ -1.88
SDO1YLR022C CEG1Q01159 459 aaPredicted RBP3.32□□□□□ -1.88
SDO1YLR022C TRS31Q03337 283 aa3.32□□□□□ -1.88
SDO1YLR022C YML096WQ04489 525 aa3.32□□□□□ -1.88
SDO1YLR022C CDD1Q06549 142 aa3.32□□□□□ -1.88
SDO1YLR022C GPM2Q12008 311 aa3.32□□□□□ -1.88
SDO1YLR022C NKP1Q12493 238 aa3.32□□□□□ -1.88
SDO1YLR022C HFA1P32874 2273 aa3.32□□□□□ -1.88
SDO1YLR022C TPK1P06244 397 aa3.31□□□□□ -1.88
SDO1YLR022C YER190C-BP0CX94 160 aa3.31□□□□□ -1.88
SDO1YLR022C YEL077W-AP0CX95 160 aa3.31□□□□□ -1.88
SDO1YLR022C YGR296C-BP0CX96 160 aa3.31□□□□□ -1.88
SDO1YLR022C YPL283W-BP0CX97 160 aa3.31□□□□□ -1.88
SDO1YLR022C YPR204C-AP0CX98 160 aa3.31□□□□□ -1.88
SDO1YLR022C TRX2P22803 104 aaKnown RBP3.31□□□□□ -1.88
SDO1YLR022C PHO3P24031 467 aa3.31□□□□□ -1.88
SDO1YLR022C COQ3P27680 312 aa3.31□□□□□ -1.88
SDO1YLR022C PIM1P36775 1133 aa3.31□□□□□ -1.88
SDO1YLR022C YBR225WP38321 900 aa3.31□□□□□ -1.88
SDO1YLR022C IMD2P38697 523 aaKnown RBP3.31□□□□□ -1.88
SDO1YLR022C YLF2P38746 405 aa3.31□□□□□ -1.88
SDO1YLR022C YHR054CP38780 354 aa3.31□□□□□ -1.88
SDO1YLR022C ARO9P38840 513 aaPredicted RBP3.31□□□□□ -1.88
SDO1YLR022C MTG2P38860 518 aa3.31□□□□□ -1.88
SDO1YLR022C ERP2P39704 215 aa3.31□□□□□ -1.88
SDO1YLR022C YIL024CP40543 189 aa3.31□□□□□ -1.88
SDO1YLR022C IMD3P50095 523 aaKnown RBP3.31□□□□□ -1.88
SDO1YLR022C PYK2P52489 506 aaKnown RBP3.31□□□□□ -1.88
SDO1YLR022C YGL260WP53056 76 aa3.31□□□□□ -1.88
SDO1YLR022C VEL1P53058 206 aa3.31□□□□□ -1.88
SDO1YLR022C SHE10P53075 577 aa3.31□□□□□ -1.88
SDO1YLR022C COP1P53622 1201 aaKnown RBP3.31□□□□□ -1.88
SDO1YLR022C YPL014WQ02606 381 aa3.31□□□□□ -1.88
SDO1YLR022C ATG16Q03818 150 aa3.31□□□□□ -1.88
SDO1YLR022C PLM2Q04383 521 aa3.31□□□□□ -1.88
SDO1YLR022C TDA9Q04545 1251 aa3.31□□□□□ -1.88
SDO1YLR022C FMP45Q07651 309 aa3.31□□□□□ -1.88
SDO1YLR022C YDL242WQ07746 117 aa3.31□□□□□ -1.88
SDO1YLR022C YOL024WQ08172 172 aa3.31□□□□□ -1.88
SDO1YLR022C YPR089WO13585 888 aa3.3□□□□□ -1.88
SDO1YLR022C YPT1P01123 206 aaKnown RBP3.3□□□□□ -1.88
SDO1YLR022C RPC53P25441 422 aa3.3□□□□□ -1.88
SDO1YLR022C PRE2P30656 287 aaKnown RBP3.3□□□□□ -1.88
SDO1YLR022C MUM2P38236 366 aa3.3□□□□□ -1.88
SDO1YLR022C YMR124WP39523 943 aaKnown RBP3.3□□□□□ -1.88
SDO1YLR022C SAP1P39955 897 aaKnown RBP3.3□□□□□ -1.88
SDO1YLR022C AVT2P39981 480 aa3.3□□□□□ -1.88
SDO1YLR022C VFA1P40080 203 aa3.3□□□□□ -1.88
SDO1YLR022C CIN1P40987 1014 aa3.3□□□□□ -1.88
SDO1YLR022C YGR021WP53212 290 aa3.3□□□□□ -1.88
SDO1YLR022C PGA2P53903 129 aa3.3□□□□□ -1.88
SDO1YLR022C YLH47Q06493 454 aa3.3□□□□□ -1.88
SDO1YLR022C RAD34Q06665 692 aa3.3□□□□□ -1.88
SDO1YLR022C TSR1Q07381 788 aaKnown RBP3.3□□□□□ -1.88
SDO1YLR022C LYS21Q12122 440 aaKnown RBP3.3□□□□□ -1.88
SDO1YLR022C YOR097CQ12274 175 aaPredicted RBP3.3□□□□□ -1.88
SDO1YLR022C SEC39Q12745 709 aa3.3□□□□□ -1.88
SDO1YLR022C YER175W-AQ8TGU4 54 aa3.3□□□□□ -1.88
SDO1YLR022C VAS1P07806 1104 aaKnown RBP3.29□□□□□ -1.88
SDO1YLR022C CIN8P27895 1000 aa3.29□□□□□ -1.88
SDO1YLR022C CWP1P28319 239 aa3.29□□□□□ -1.88
SDO1YLR022C SCS2P40075 244 aaKnown RBP3.29□□□□□ -1.88
SDO1YLR022C VPS27P40343 622 aaKnown RBP3.29□□□□□ -1.88
SDO1YLR022C CIS3P47001 227 aa3.29□□□□□ -1.88
SDO1YLR022C BIR1P47134 954 aa3.29□□□□□ -1.88
SDO1YLR022C ORC5P50874 479 aa3.29□□□□□ -1.88
SDO1YLR022C VTC3Q02725 835 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms