RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	EMP70	P32802	667 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	UGP1	P32861	499 aa	Known RBP	5.22	□□□□□ -1.57
SPC34	YKR037C	KES1	P35844	434 aa	Known RBP	5.22	□□□□□ -1.57
SPC34	YKR037C	BYE1	P36106	594 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	EXO1	P39875	702 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	ASG1	P40467	964 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	GPD2	P41911	440 aa	Known RBP	5.22	□□□□□ -1.57
SPC34	YKR037C	TDA10	P42938	290 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	RPS7B	P48164	190 aa	Known RBP	5.22	□□□□□ -1.57
SPC34	YKR037C	YMR155W	Q03795	547 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	BUD22	Q04347	519 aa	Known RBP	5.22	□□□□□ -1.57
SPC34	YKR037C	CYK3	Q07533	885 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	YEH1	Q07804	573 aa		5.22	□□□□□ -1.57
SPC34	YKR037C	LEA1	Q08963	238 aa	Predicted RBP	5.22	□□□□□ -1.57
SPC34	YKR037C	GET3	Q12154	354 aa	Known RBP	5.22	□□□□□ -1.57
SPC34	YKR037C	HXK2	P04807	486 aa	Known RBP	5.21	□□□□□ -1.58
SPC34	YKR037C	APE1	P14904	514 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	YIH1	P25637	258 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	YMC1	P32331	307 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	PDB1	P32473	366 aa	Known RBP	5.21	□□□□□ -1.58
SPC34	YKR037C	ORC2	P32833	620 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	YNG2	P38806	282 aa	Known RBP	5.21	□□□□□ -1.58
SPC34	YKR037C	MMF1	P40185	145 aa	Known RBP	5.21	□□□□□ -1.58
SPC34	YKR037C	YJL043W	P47053	257 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	SLI1	P53304	468 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	YOR389W	Q08912	624 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	ULA1	Q12059	462 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	SFI1	Q12369	946 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	RTN2	Q12443	393 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	YJR112W-A	Q3E743	109 aa		5.21	□□□□□ -1.58
SPC34	YKR037C	ADE5,7	P07244	802 aa	Known RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	PWP1	P21304	576 aa	Known RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	ERG3	P32353	365 aa		5.2	□□□□□ -1.58
SPC34	YKR037C	DBP7	P36120	742 aa	Known RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	ADE17	P38009	592 aa	Known RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	RKM3	P38222	552 aa		5.2	□□□□□ -1.58
SPC34	YKR037C	PHM8	P40025	321 aa		5.2	□□□□□ -1.58
SPC34	YKR037C	STR3	P53101	465 aa	Known RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	SOL4	P53315	255 aa		5.2	□□□□□ -1.58
SPC34	YKR037C	YGR266W	P53326	701 aa		5.2	□□□□□ -1.58
SPC34	YKR037C	HEF3	P53978	1044 aa	Known RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	YMR321C	Q04898	105 aa		5.2	□□□□□ -1.58
SPC34	YKR037C	KEL3	Q08979	651 aa	Predicted RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	PGA3	Q12746	312 aa	Known RBP	5.2	□□□□□ -1.58
SPC34	YKR037C	YPT6	Q99260	215 aa		5.2	□□□□□ -1.58
SPC34	YKR037C	RPN13	O13563	156 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	ARD1	P07347	238 aa	Predicted RBP	5.19	□□□□□ -1.58
SPC34	YKR037C	SAM1	P10659	382 aa	Known RBP	5.19	□□□□□ -1.58
SPC34	YKR037C	HOM3	P10869	527 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	VMA8	P32610	256 aa	Known RBP	5.19	□□□□□ -1.58
SPC34	YKR037C	RPC34	P32910	317 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	PXA2	P34230	853 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	YEL057C	P39983	233 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	ECM10	P39987	644 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	YEL020C	P39994	560 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	MAF1	P41910	395 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	IRC8	P47046	822 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	RSC1	P53236	928 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	YGR066C	P53242	292 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	IST1	P53843	298 aa	Predicted RBP	5.19	□□□□□ -1.58
SPC34	YKR037C	INM2	Q05533	292 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	RAD34	Q06665	692 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	NSE1	Q07913	336 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	BUD7	Q08754	746 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	PNS1	Q12412	539 aa		5.19	□□□□□ -1.58
SPC34	YKR037C	AQY1	P0CD91	305 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	EST1	P17214	699 aa	Predicted RBP	5.18	□□□□□ -1.58
SPC34	YKR037C	GSH1	P32477	678 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	SHP1	P34223	423 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	COY1	P34237	679 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	MNN2	P38069	597 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	SLX1	P38324	304 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
SPC34	YKR037C	CTK2	P46962	323 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	DPB11	P47027	764 aa	Predicted RBP	5.18	□□□□□ -1.58
SPC34	YKR037C	DIA3	P52290	468 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	YNL058C	P53947	316 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	YLR455W	Q06188	304 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	ARO10	Q06408	635 aa		5.18	□□□□□ -1.58
SPC34	YKR037C	LUC7	Q07508	261 aa	Predicted RBP	5.18	□□□□□ -1.58
SPC34	YKR037C	YLR422W	Q06409	1932 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	BI2	P03873	423 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
SPC34	YKR037C	PET111	P08468	800 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	SPO11	P23179	398 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	TKL1	P23254	680 aa	Known RBP	5.17	□□□□□ -1.58
SPC34	YKR037C	ECM32	P32644	1121 aa	Known RBP	5.17	□□□□□ -1.58
SPC34	YKR037C	YKL050C	P35736	922 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	UBP11	P36026	717 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	MUM2	P38236	366 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	DIA4	P38705	446 aa	Predicted RBP	5.17	□□□□□ -1.58
SPC34	YKR037C	LSM5	P40089	93 aa	Known RBP	5.17	□□□□□ -1.58
SPC34	YKR037C	MET28	P40573	187 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	AXL1	P40851	1208 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	YFR020W	P43600	232 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	YPR003C	P53394	754 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	VPS38	Q05919	439 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	YPL272C	Q08984	517 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	RIM20	Q12033	661 aa		5.17	□□□□□ -1.58
SPC34	YKR037C	PDX1	P16451	410 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms