RNA–Protein interactions for RNA: YJR135W-A

TIM8, Transcript of Mitochondrial intermembrane space protein, yeastyeast

Gene TIM8, Length 264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM8YJR135W-A SHR3Q02774 210 aa2.44□□□□□ -2.02
TIM8YJR135W-A NGL3Q03210 505 aa2.44□□□□□ -2.02
TIM8YJR135W-A MSS11Q03825 758 aa2.44□□□□□ -2.02
TIM8YJR135W-A FIN1Q03898 291 aa2.44□□□□□ -2.02
TIM8YJR135W-A TMA64Q04600 565 aaKnown RBP2.44□□□□□ -2.02
TIM8YJR135W-A NRT1Q08485 598 aa2.44□□□□□ -2.02
TIM8YJR135W-A BUD21Q08492 214 aaPredicted RBP2.44□□□□□ -2.02
TIM8YJR135W-A RRI2Q12348 645 aa2.44□□□□□ -2.02
TIM8YJR135W-A DFR1P07807 211 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
TIM8YJR135W-A BAR1P12630 587 aa2.43□□□□□ -2.02
TIM8YJR135W-A HSC82P15108 705 aaKnown RBP2.43□□□□□ -2.02
TIM8YJR135W-A GLN3P18494 730 aa2.43□□□□□ -2.02
TIM8YJR135W-A PEP3P27801 918 aa2.43□□□□□ -2.02
TIM8YJR135W-A SEC1P30619 724 aaKnown RBP2.43□□□□□ -2.02
TIM8YJR135W-A ACH1P32316 526 aa2.43□□□□□ -2.02
TIM8YJR135W-A ERG1P32476 496 aaKnown RBP2.43□□□□□ -2.02
TIM8YJR135W-A TIF3P34167 436 aaKnown RBP2.43□□□□□ -2.02
TIM8YJR135W-A UBP11P36026 717 aa2.43□□□□□ -2.02
TIM8YJR135W-A YJL068CP40363 299 aa2.43□□□□□ -2.02
TIM8YJR135W-A AZF1P41696 914 aa2.43□□□□□ -2.02
TIM8YJR135W-A SNG1P46950 547 aa2.43□□□□□ -2.02
TIM8YJR135W-A DSD1P53095 428 aa2.43□□□□□ -2.02
TIM8YJR135W-A HOS2P53096 452 aaPredicted RBP2.43□□□□□ -2.02
TIM8YJR135W-A TDA7P53882 636 aaPredicted RBP2.43□□□□□ -2.02
TIM8YJR135W-A SAM50P53969 484 aa2.43□□□□□ -2.02
TIM8YJR135W-A MSC1Q03104 513 aa2.43□□□□□ -2.02
TIM8YJR135W-A GLO2Q05584 274 aa2.43□□□□□ -2.02
TIM8YJR135W-A THI20Q08224 551 aa2.43□□□□□ -2.02
TIM8YJR135W-A MED1Q12321 566 aa2.43□□□□□ -2.02
TIM8YJR135W-A PDH1Q12428 516 aaKnown RBP2.43□□□□□ -2.02
TIM8YJR135W-A AVL9Q12500 764 aa2.43□□□□□ -2.02
TIM8YJR135W-A CSR2Q12734 1121 aa2.43□□□□□ -2.02
TIM8YJR135W-A CBS1P14066 229 aa2.42□□□□□ -2.02
TIM8YJR135W-A PDA1P16387 420 aaKnown RBP2.42□□□□□ -2.02
TIM8YJR135W-A EST1P17214 699 aaPredicted RBP2.42□□□□□ -2.02
TIM8YJR135W-A TCD2P36101 447 aaKnown RBP2.42□□□□□ -2.02
TIM8YJR135W-A REG2P38232 338 aa2.42□□□□□ -2.02
TIM8YJR135W-A YBR225WP38321 900 aa2.42□□□□□ -2.02
TIM8YJR135W-A YHR210CP38893 341 aa2.42□□□□□ -2.02
TIM8YJR135W-A YER130CP39959 443 aa2.42□□□□□ -2.02
TIM8YJR135W-A CSM2P40465 213 aa2.42□□□□□ -2.02
TIM8YJR135W-A RMD8P43620 662 aa2.42□□□□□ -2.02
TIM8YJR135W-A ALK1P43633 760 aaKnown RBP2.42□□□□□ -2.02
TIM8YJR135W-A MRX6P48564 524 aa2.42□□□□□ -2.02
TIM8YJR135W-A YGL260WP53056 76 aa2.42□□□□□ -2.02
TIM8YJR135W-A LCL3P53153 274 aa2.42□□□□□ -2.02
TIM8YJR135W-A VPS75P53853 264 aa2.42□□□□□ -2.02
TIM8YJR135W-A CRZ1P53968 678 aa2.42□□□□□ -2.02
TIM8YJR135W-A YPL014WQ02606 381 aa2.42□□□□□ -2.02
TIM8YJR135W-A YMR317WQ04893 1140 aa2.42□□□□□ -2.02
TIM8YJR135W-A VPS38Q05919 439 aa2.42□□□□□ -2.02
TIM8YJR135W-A DIC1Q06143 298 aa2.42□□□□□ -2.02
TIM8YJR135W-A NCE102Q12207 173 aaRIP-Chip data2.42□□□□□ -2.02not detected
TIM8YJR135W-A BRR1Q99177 341 aaPredicted RBP2.42□□□□□ -2.02
TIM8YJR135W-A YML002WP0CF17 737 aa2.41□□□□□ -2.02
TIM8YJR135W-A MRP13P12686 339 aa2.41□□□□□ -2.02
TIM8YJR135W-A MRP7P12687 371 aa2.41□□□□□ -2.02
TIM8YJR135W-A PMS1P14242 873 aa2.41□□□□□ -2.02
TIM8YJR135W-A SEC62P21825 274 aa2.41□□□□□ -2.02
TIM8YJR135W-A OCA4P25366 362 aa2.41□□□□□ -2.02
TIM8YJR135W-A RPS2P25443 254 aaKnown RBP2.41□□□□□ -2.02
TIM8YJR135W-A PAP1P29468 568 aaKnown RBP2.41□□□□□ -2.02
TIM8YJR135W-A SHP1P34223 423 aa2.41□□□□□ -2.02
TIM8YJR135W-A MSR1P38714 643 aa2.41□□□□□ -2.02
TIM8YJR135W-A ARF3P40994 183 aaRIP-Chip data2.41□□□□□ -2.02not detected
TIM8YJR135W-A YJR154WP47181 346 aa2.41□□□□□ -2.02
TIM8YJR135W-A IMD4P50094 524 aaKnown RBP2.41□□□□□ -2.02
TIM8YJR135W-A RBG2P53295 368 aaKnown RBP2.41□□□□□ -2.02
TIM8YJR135W-A ARE2P53629 642 aaKnown RBP2.41□□□□□ -2.02
TIM8YJR135W-A IPI3P53877 555 aa2.41□□□□□ -2.02
TIM8YJR135W-A TOF2Q02208 771 aa2.41□□□□□ -2.02
TIM8YJR135W-A RPM2Q02773 1202 aa2.41□□□□□ -2.02
TIM8YJR135W-A FMP45Q07651 309 aa2.41□□□□□ -2.02
TIM8YJR135W-A YOR365CQ08844 703 aa2.41□□□□□ -2.02
TIM8YJR135W-A DAP1Q12091 152 aa2.41□□□□□ -2.02
TIM8YJR135W-A FOB1O13329 566 aa2.4□□□□□ -2.03
TIM8YJR135W-A PEP4P07267 405 aaKnown RBP2.4□□□□□ -2.03
TIM8YJR135W-A MET8P15807 274 aa2.4□□□□□ -2.03
TIM8YJR135W-A PRP2P20095 876 aaPredicted RBP2.4□□□□□ -2.03
TIM8YJR135W-A PRD1P25375 712 aa2.4□□□□□ -2.03
TIM8YJR135W-A MRE11P32829 692 aa2.4□□□□□ -2.03
TIM8YJR135W-A SWE1P32944 819 aa2.4□□□□□ -2.03
TIM8YJR135W-A ECM15P35195 104 aa2.4□□□□□ -2.03
TIM8YJR135W-A UTP9P38882 575 aaKnown RBP2.4□□□□□ -2.03
TIM8YJR135W-A NPR2P39923 615 aa2.4□□□□□ -2.03
TIM8YJR135W-A BUD32P53323 261 aa2.4□□□□□ -2.03
TIM8YJR135W-A VPS72Q03388 795 aa2.4□□□□□ -2.03
TIM8YJR135W-A HCR1Q05775 265 aaKnown RBP2.4□□□□□ -2.03
TIM8YJR135W-A YDL057WQ07379 328 aa2.4□□□□□ -2.03
TIM8YJR135W-A RLM1Q12224 676 aa2.4□□□□□ -2.03
TIM8YJR135W-A RTP1Q12751 981 aa2.4□□□□□ -2.03
TIM8YJR135W-A HSH49Q99181 213 aaPredicted RBP2.4□□□□□ -2.03
TIM8YJR135W-A SGS1P35187 1447 aa2.4□□□□□ -2.03
TIM8YJR135W-A GAL80P04387 435 aa2.39□□□□□ -2.03
TIM8YJR135W-A APE1P14904 514 aa2.39□□□□□ -2.03
TIM8YJR135W-A YCR007CP25354 239 aa2.39□□□□□ -2.03
TIM8YJR135W-A WBP1P33767 430 aaKnown RBP2.39□□□□□ -2.03
TIM8YJR135W-A FMP46P36141 133 aaKnown RBP2.39□□□□□ -2.03
TIM8YJR135W-A DUG2P38149 878 aa2.39□□□□□ -2.03
TIM8YJR135W-A MUM2P38236 366 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms