RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C YIH1P25637 258 aa1.54□□□□□ -2.16
VPS55YJR044C RFA2P26754 273 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C GPI10P30777 616 aa1.54□□□□□ -2.16
VPS55YJR044C NPL6P32832 435 aa1.54□□□□□ -2.16
VPS55YJR044C PDR3P33200 976 aa1.54□□□□□ -2.16
VPS55YJR044C SEF1P34228 1148 aa1.54□□□□□ -2.16
VPS55YJR044C AUR1P36107 401 aaPredicted RBP1.54□□□□□ -2.16
VPS55YJR044C ADE17P38009 592 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C SRO77P38163 1010 aa1.54□□□□□ -2.16
VPS55YJR044C UBP13P38187 747 aa1.54□□□□□ -2.16
VPS55YJR044C CST26P38226 397 aa1.54□□□□□ -2.16
VPS55YJR044C RXT2P38255 430 aa1.54□□□□□ -2.16
VPS55YJR044C CAJ1P39101 391 aa1.54□□□□□ -2.16
VPS55YJR044C NPR2P39923 615 aa1.54□□□□□ -2.16
VPS55YJR044C PHM8P40025 321 aa1.54□□□□□ -2.16
VPS55YJR044C BUR6P40096 142 aa1.54□□□□□ -2.16
VPS55YJR044C SLZ1P40167 298 aa1.54□□□□□ -2.16
VPS55YJR044C HXT9P40885 567 aa1.54□□□□□ -2.16
VPS55YJR044C LCB2P40970 561 aa1.54□□□□□ -2.16
VPS55YJR044C IME4P41833 600 aa1.54□□□□□ -2.16
VPS55YJR044C ZIM17P42844 174 aa1.54□□□□□ -2.16
VPS55YJR044C FET5P43561 622 aa1.54□□□□□ -2.16
VPS55YJR044C AAD10P47182 288 aa1.54□□□□□ -2.16
VPS55YJR044C MNP1P53163 194 aaPredicted RBP1.54□□□□□ -2.16
VPS55YJR044C ARE2P53629 642 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C VPS75P53853 264 aa1.54□□□□□ -2.16
VPS55YJR044C YNL234WP53857 426 aa1.54□□□□□ -2.16
VPS55YJR044C CSL4P53859 292 aaPredicted RBP1.54□□□□□ -2.16
VPS55YJR044C MAK10Q02197 733 aa1.54□□□□□ -2.16
VPS55YJR044C MUB1Q03162 620 aa1.54□□□□□ -2.16
VPS55YJR044C RSM28Q03430 361 aa1.54□□□□□ -2.16
VPS55YJR044C EKI1Q03764 534 aa1.54□□□□□ -2.16
VPS55YJR044C AIM32Q04689 311 aa1.54□□□□□ -2.16
VPS55YJR044C ATG23Q06671 453 aa1.54□□□□□ -2.16
VPS55YJR044C VAM6Q07468 1049 aa1.54□□□□□ -2.16
VPS55YJR044C RIX7Q07844 837 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C PPT2Q12036 173 aa1.54□□□□□ -2.16
VPS55YJR044C PAR32Q12515 295 aaKnown RBP1.54□□□□□ -2.16
VPS55YJR044C YOR019WQ99248 730 aa1.54□□□□□ -2.16
VPS55YJR044C YML003WP0CF16 290 aa1.53□□□□□ -2.16
VPS55YJR044C RPL19AP0CX82 189 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C RPL19BP0CX83 189 aaPredicted RBP1.53□□□□□ -2.16
VPS55YJR044C BIK1P11709 440 aa1.53□□□□□ -2.16
VPS55YJR044C RPL3P14126 387 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C LRE1P25579 583 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C BRF1P29056 596 aa1.53□□□□□ -2.16
VPS55YJR044C ERG3P32353 365 aa1.53□□□□□ -2.16
VPS55YJR044C SOF1P33750 489 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C RRP1P35178 278 aaPredicted RBP1.53□□□□□ -2.16
VPS55YJR044C LHS1P36016 881 aa1.53□□□□□ -2.16
VPS55YJR044C STB6P36085 766 aa1.53□□□□□ -2.16
VPS55YJR044C YPK3P38070 525 aa1.53□□□□□ -2.16
VPS55YJR044C VID24P38263 362 aa1.53□□□□□ -2.16
VPS55YJR044C LRP1P38801 184 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C MRX1P40050 688 aa1.53□□□□□ -2.16
VPS55YJR044C ALG5P40350 334 aa1.53□□□□□ -2.16
VPS55YJR044C SEC28P40509 296 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C PTR3P43606 678 aa1.53□□□□□ -2.16
VPS55YJR044C SIP4P46954 829 aa1.53□□□□□ -2.16
VPS55YJR044C DIA3P52290 468 aa1.53□□□□□ -2.16
VPS55YJR044C SGF73P53165 657 aa1.53□□□□□ -2.16
VPS55YJR044C YGR016WP53209 190 aa1.53□□□□□ -2.16
VPS55YJR044C NNF2P53253 936 aa1.53□□□□□ -2.16
VPS55YJR044C DCP2P53550 970 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C BOR1P53838 576 aa1.53□□□□□ -2.16
VPS55YJR044C JJJ1P53863 590 aa1.53□□□□□ -2.16
VPS55YJR044C PEX25Q02969 394 aa1.53□□□□□ -2.16
VPS55YJR044C NGL3Q03210 505 aa1.53□□□□□ -2.16
VPS55YJR044C ERB1Q04660 807 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C VPS38Q05919 439 aa1.53□□□□□ -2.16
VPS55YJR044C CRN1Q06440 651 aa1.53□□□□□ -2.16
VPS55YJR044C MCP2Q06567 569 aa1.53□□□□□ -2.16
VPS55YJR044C SWA2Q06677 668 aa1.53□□□□□ -2.16
VPS55YJR044C FMP40Q08968 688 aaPredicted RBP1.53□□□□□ -2.16
VPS55YJR044C SMF3Q12078 473 aaPredicted RBP1.53□□□□□ -2.16
VPS55YJR044C CFT2Q12102 859 aaPredicted RBP1.53□□□□□ -2.16
VPS55YJR044C NMD4Q12129 218 aa1.53□□□□□ -2.16
VPS55YJR044C YLL056CQ12177 298 aa1.53□□□□□ -2.16
VPS55YJR044C PDH1Q12428 516 aaKnown RBP1.53□□□□□ -2.16
VPS55YJR044C CSR2Q12734 1121 aa1.53□□□□□ -2.16
VPS55YJR044C YJR112W-AQ3E743 109 aa1.53□□□□□ -2.16
VPS55YJR044C AFI1Q99222 893 aa1.53□□□□□ -2.16
VPS55YJR044C VCX1Q99385 411 aa1.53□□□□□ -2.16
VPS55YJR044C EDE1P34216 1381 aa1.52□□□□□ -2.17
VPS55YJR044C GAL80P04387 435 aa1.52□□□□□ -2.17
VPS55YJR044C DFR1P07807 211 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
VPS55YJR044C MDH1P17505 334 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
VPS55YJR044C CLC1P17891 233 aa1.52□□□□□ -2.17
VPS55YJR044C GLN3P18494 730 aa1.52□□□□□ -2.17
VPS55YJR044C CLB1P24868 471 aa1.52□□□□□ -2.17
VPS55YJR044C YCR051WP25631 222 aa1.52□□□□□ -2.17
VPS55YJR044C DPH2P32461 534 aa1.52□□□□□ -2.17
VPS55YJR044C SMI1P32566 505 aa1.52□□□□□ -2.17
VPS55YJR044C SRB5P32585 307 aa1.52□□□□□ -2.17
VPS55YJR044C YME1P32795 747 aa1.52□□□□□ -2.17
VPS55YJR044C YHR054CP38780 354 aa1.52□□□□□ -2.17
VPS55YJR044C PSD1P39006 500 aa1.52□□□□□ -2.17
VPS55YJR044C RGI2P40188 164 aa1.52□□□□□ -2.17
VPS55YJR044C SEC24P40482 926 aaKnown RBP1.52□□□□□ -2.17
VPS55YJR044C PKP1P40530 394 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms