RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C SSE2P32590 693 aaKnown RBP3.54□□□□□ -1.84
CTK2YJL006C YBR144CP34215 104 aa3.54□□□□□ -1.84
CTK2YJL006C RRT2P38332 387 aa3.54□□□□□ -1.84
CTK2YJL006C FLC2P39719 783 aa3.54□□□□□ -1.84
CTK2YJL006C PTR3P43606 678 aa3.54□□□□□ -1.84
CTK2YJL006C YGR127WP53275 312 aa3.54□□□□□ -1.84
CTK2YJL006C SOL4P53315 255 aa3.54□□□□□ -1.84
CTK2YJL006C YML037CQ03703 340 aa3.54□□□□□ -1.84
CTK2YJL006C BUD22Q04347 519 aaKnown RBP3.54□□□□□ -1.84
CTK2YJL006C ECM30Q06673 1274 aa3.54□□□□□ -1.84
CTK2YJL006C LUC7Q07508 261 aaPredicted RBP3.54□□□□□ -1.84
CTK2YJL006C RDR1Q08904 546 aa3.54□□□□□ -1.84
CTK2YJL006C BUD5P25300 642 aaPredicted RBP3.53□□□□□ -1.84
CTK2YJL006C CMK1P27466 446 aaKnown RBP3.53□□□□□ -1.84
CTK2YJL006C AGA1P32323 725 aa3.53□□□□□ -1.84
CTK2YJL006C IMP2'P32351 346 aa3.53□□□□□ -1.84
CTK2YJL006C MTR2P34232 184 aaKnown RBP3.53□□□□□ -1.84
CTK2YJL006C ROT2P38138 954 aa3.53□□□□□ -1.84
CTK2YJL006C ICS2P38284 255 aa3.53□□□□□ -1.84
CTK2YJL006C SLX1P38324 304 aa3.53□□□□□ -1.84
CTK2YJL006C RRP3P38712 501 aaKnown RBP3.53□□□□□ -1.84
CTK2YJL006C PYK2P52489 506 aaKnown RBP3.53□□□□□ -1.84
CTK2YJL006C LCL3P53153 274 aa3.53□□□□□ -1.84
CTK2YJL006C RSM23Q01163 450 aa3.53□□□□□ -1.84
CTK2YJL006C NGL3Q03210 505 aa3.53□□□□□ -1.84
CTK2YJL006C RPL15AP05748 204 aaKnown RBP3.52□□□□□ -1.85
CTK2YJL006C BOS1P25385 244 aa3.52□□□□□ -1.85
CTK2YJL006C IMG1P25626 169 aa3.52□□□□□ -1.85
CTK2YJL006C SNC1P31109 117 aa3.52□□□□□ -1.85
CTK2YJL006C YBL055CP34220 418 aaPredicted RBP3.52□□□□□ -1.85
CTK2YJL006C YER130CP39959 443 aa3.52□□□□□ -1.85
CTK2YJL006C YJL213WP40896 331 aa3.52□□□□□ -1.85
CTK2YJL006C YJL132WP47014 750 aa3.52□□□□□ -1.85
CTK2YJL006C APT1P49435 187 aaKnown RBP3.52□□□□□ -1.85
CTK2YJL006C TDA7P53882 636 aaPredicted RBP3.52□□□□□ -1.85
CTK2YJL006C SUB1P54000 292 aaKnown RBP3.52□□□□□ -1.85
CTK2YJL006C HCR1Q05775 265 aaKnown RBP3.52□□□□□ -1.85
CTK2YJL006C YEH1Q07804 573 aa3.52□□□□□ -1.85
CTK2YJL006C SPA2P23201 1466 aaKnown RBP3.52□□□□□ -1.85
CTK2YJL006C OLE1P21147 510 aaKnown RBP3.51□□□□□ -1.85
CTK2YJL006C YKL100CP34248 587 aa3.51□□□□□ -1.85
CTK2YJL006C PHD1P36093 366 aa3.51□□□□□ -1.85
CTK2YJL006C SPC34P36131 295 aa3.51□□□□□ -1.85
CTK2YJL006C NUP133P36161 1157 aa3.51□□□□□ -1.85
CTK2YJL006C LAG1P38703 411 aa3.51□□□□□ -1.85
CTK2YJL006C CCT6P39079 546 aa3.51□□□□□ -1.85
CTK2YJL006C IKS1P47042 667 aa3.51□□□□□ -1.85
CTK2YJL006C MSC1Q03104 513 aa3.51□□□□□ -1.85
CTK2YJL006C IMH1Q06704 911 aaKnown RBP3.51□□□□□ -1.85
CTK2YJL006C YEH2Q07950 538 aa3.51□□□□□ -1.85
CTK2YJL006C FMP40Q08968 688 aaPredicted RBP3.51□□□□□ -1.85
CTK2YJL006C RRI2Q12348 645 aa3.51□□□□□ -1.85
CTK2YJL006C RPS2P25443 254 aaKnown RBP3.5□□□□□ -1.85
CTK2YJL006C SGF29P25554 259 aa3.5□□□□□ -1.85
CTK2YJL006C MCM4P30665 933 aaKnown RBP3.5□□□□□ -1.85
CTK2YJL006C UBP11P36026 717 aa3.5□□□□□ -1.85
CTK2YJL006C RPL32P38061 130 aaKnown RBP3.5□□□□□ -1.85
CTK2YJL006C AFG3P39925 761 aa3.5□□□□□ -1.85
CTK2YJL006C YGL242CP53066 181 aa3.5□□□□□ -1.85
CTK2YJL006C DSD1P53095 428 aa3.5□□□□□ -1.85
CTK2YJL006C SSK1Q07084 712 aa3.5□□□□□ -1.85
CTK2YJL006C CTI6Q08923 506 aa3.5□□□□□ -1.85
CTK2YJL006C RCN2Q12044 265 aa3.5□□□□□ -1.85
CTK2YJL006C ARP6Q12509 438 aa3.5□□□□□ -1.85
CTK2YJL006C YPT6Q99260 215 aa3.5□□□□□ -1.85
CTK2YJL006C ART10P18634 518 aaKnown RBP3.49□□□□□ -1.85
CTK2YJL006C ATS1P31386 333 aa3.49□□□□□ -1.85
CTK2YJL006C RPH1P39956 796 aa3.49□□□□□ -1.85
CTK2YJL006C YFR016CP43597 1233 aaKnown RBP3.49□□□□□ -1.85
CTK2YJL006C MRX6P48564 524 aa3.49□□□□□ -1.85
CTK2YJL006C SMM1P53720 384 aaKnown RBP3.49□□□□□ -1.85
CTK2YJL006C YMR160WQ03823 816 aa3.49□□□□□ -1.85
CTK2YJL006C CDC45Q08032 650 aa3.49□□□□□ -1.85
CTK2YJL006C MED1Q12321 566 aa3.49□□□□□ -1.85
CTK2YJL006C YJR112W-AQ3E743 109 aa3.49□□□□□ -1.85
CTK2YJL006C MRP13P12686 339 aa3.48□□□□□ -1.85
CTK2YJL006C MCK1P21965 375 aaKnown RBP3.48□□□□□ -1.85
CTK2YJL006C PEP3P27801 918 aa3.48□□□□□ -1.85
CTK2YJL006C ACH1P32316 526 aa3.48□□□□□ -1.85
CTK2YJL006C YBP1P38315 674 aa3.48□□□□□ -1.85
CTK2YJL006C YBR225WP38321 900 aa3.48□□□□□ -1.85
CTK2YJL006C CIN4P39110 191 aa3.48□□□□□ -1.85
CTK2YJL006C AXL1P40851 1208 aa3.48□□□□□ -1.85
CTK2YJL006C COS10P52924 374 aa3.48□□□□□ -1.85
CTK2YJL006C VID30P53076 958 aa3.48□□□□□ -1.85
CTK2YJL006C YVH1Q02256 364 aaKnown RBP3.48□□□□□ -1.85
CTK2YJL006C RPM2Q02773 1202 aa3.48□□□□□ -1.85
CTK2YJL006C MSS11Q03825 758 aa3.48□□□□□ -1.85
CTK2YJL006C DIC1Q06143 298 aa3.48□□□□□ -1.85
CTK2YJL006C FMP45Q07651 309 aa3.48□□□□□ -1.85
CTK2YJL006C NCE102Q12207 173 aaRIP-Chip data3.48□□□□□ -1.85not detected
CTK2YJL006C PDH1Q12428 516 aaKnown RBP3.48□□□□□ -1.85
CTK2YJL006C SET6Q12529 373 aa3.48□□□□□ -1.85
CTK2YJL006C GCN4P03069 281 aa3.47□□□□□ -1.85
CTK2YJL006C PEP5P12868 1029 aa3.47□□□□□ -1.85
CTK2YJL006C MET8P15807 274 aa3.47□□□□□ -1.85
CTK2YJL006C EST1P17214 699 aaPredicted RBP3.47□□□□□ -1.85
CTK2YJL006C SWE1P32944 819 aa3.47□□□□□ -1.85
CTK2YJL006C SEF1P34228 1148 aa3.47□□□□□ -1.85
CTK2YJL006C NAB3P38996 802 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms