RNA–Protein interactions for RNA: YHL009W-A

YHL009W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YHL009W-A, Length 1,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-AYHL009W-A PUT2P07275 575 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A KGD1P20967 1014 aaKnown RBP2.36□□□□□ -2.03
YHL009W-AYHL009W-A ISY1P21374 235 aaPredicted RBP2.36□□□□□ -2.03
YHL009W-AYHL009W-A SYN8P31377 255 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A CNS1P33313 385 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A DIA4P38705 446 aaPredicted RBP2.36□□□□□ -2.03
YHL009W-AYHL009W-A ELO1P39540 310 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A VPS52P39904 641 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A MUB1Q03162 620 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A SKG3Q06315 1026 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A ECM30Q06673 1274 aa2.36□□□□□ -2.03
YHL009W-AYHL009W-A CAR1P00812 333 aaKnown RBP2.35□□□□□ -2.03
YHL009W-AYHL009W-A PWP1P21304 576 aaKnown RBP2.35□□□□□ -2.03
YHL009W-AYHL009W-A SWD3P38123 315 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A KTR3P38130 404 aaPredicted RBP2.35□□□□□ -2.03
YHL009W-AYHL009W-A LAG1P38703 411 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A UIP3P39547 235 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A IES5P40060 125 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A SGM1P47166 707 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A BUD32P53323 261 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A SMM1P53720 384 aaKnown RBP2.35□□□□□ -2.03
YHL009W-AYHL009W-A GTR1Q00582 310 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A YVH1Q02256 364 aaKnown RBP2.35□□□□□ -2.03
YHL009W-AYHL009W-A RLI1Q03195 608 aaKnown RBP2.35□□□□□ -2.03
YHL009W-AYHL009W-A RCO1Q04779 684 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A VIP1Q06685 1146 aaKnown RBP2.35□□□□□ -2.03
YHL009W-AYHL009W-A ENT4Q07872 247 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A TEN1Q07921 160 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A HRT3Q12347 344 aa2.35□□□□□ -2.03
YHL009W-AYHL009W-A PSY4P38193 441 aa2.34□□□□□ -2.03
YHL009W-AYHL009W-A DBP8P38719 431 aa2.34□□□□□ -2.03
YHL009W-AYHL009W-A UME6P39001 836 aa2.34□□□□□ -2.03
YHL009W-AYHL009W-A ERG26P53199 349 aaKnown RBP2.34□□□□□ -2.03
YHL009W-AYHL009W-A DRN1P53255 507 aaKnown RBP2.34□□□□□ -2.03
YHL009W-AYHL009W-A GLO2Q05584 274 aa2.34□□□□□ -2.03
YHL009W-AYHL009W-A NKP1Q12493 238 aa2.34□□□□□ -2.03
YHL009W-AYHL009W-A ARG81P05085 880 aa2.33□□□□□ -2.04
YHL009W-AYHL009W-A SPE2P21182 396 aa2.33□□□□□ -2.04
YHL009W-AYHL009W-A PDB1P32473 366 aaKnown RBP2.33□□□□□ -2.04
YHL009W-AYHL009W-A YER010CP40011 234 aa2.33□□□□□ -2.04
YHL009W-AYHL009W-A SHO1P40073 367 aa2.33□□□□□ -2.04
YHL009W-AYHL009W-A CSM2P40465 213 aa2.33□□□□□ -2.04
YHL009W-AYHL009W-A MSC1Q03104 513 aa2.33□□□□□ -2.04
YHL009W-AYHL009W-A CLN3P13365 580 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A AMD1P15274 810 aaKnown RBP2.32□□□□□ -2.04
YHL009W-AYHL009W-A CBF2P32504 956 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A YNG2P38806 282 aaKnown RBP2.32□□□□□ -2.04
YHL009W-AYHL009W-A SAP185P40856 1058 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A DIA3P52290 468 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A RHO4Q00246 291 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A YMR160WQ03823 816 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A PSR1Q07800 427 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A RIX7Q07844 837 aaKnown RBP2.32□□□□□ -2.04
YHL009W-AYHL009W-A TMS1Q12116 473 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A NCE102Q12207 173 aaRIP-Chip data2.32□□□□□ -2.04not detected
YHL009W-AYHL009W-A SSM4P40318 1319 aa2.32□□□□□ -2.04
YHL009W-AYHL009W-A SUP35P05453 685 aaKnown RBP2.31□□□□□ -2.04
YHL009W-AYHL009W-A APE1P14904 514 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A SLC1P33333 303 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A OSH3P38713 996 aaKnown RBP2.31□□□□□ -2.04
YHL009W-AYHL009W-A ALG8P40351 577 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A SNG1P46950 547 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A SIP4P46954 829 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A AAD10P47182 288 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A ARK1P53974 638 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A ELP3Q02908 557 aaKnown RBP2.31□□□□□ -2.04
YHL009W-AYHL009W-A DPB4Q04603 196 aaKnown RBP2.31□□□□□ -2.04
YHL009W-AYHL009W-A SYO1Q07395 620 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A YPL272CQ08984 517 aa2.31□□□□□ -2.04
YHL009W-AYHL009W-A LEU9Q12166 604 aaKnown RBP2.31□□□□□ -2.04
YHL009W-AYHL009W-A HHF1P02309 103 aaKnown RBP2.3□□□□□ -2.04
YHL009W-AYHL009W-A CPR1P14832 162 aaKnown RBP2.3□□□□□ -2.04
YHL009W-AYHL009W-A PUT3P25502 979 aaPredicted RBP2.3□□□□□ -2.04
YHL009W-AYHL009W-A MAL33P38157 468 aa2.3□□□□□ -2.04
YHL009W-AYHL009W-A YJR008WP47085 338 aa2.3□□□□□ -2.04
YHL009W-AYHL009W-A YGR021WP53212 290 aa2.3□□□□□ -2.04
YHL009W-AYHL009W-A DUG3P53871 357 aa2.3□□□□□ -2.04
YHL009W-AYHL009W-A PBA1Q05778 276 aa2.3□□□□□ -2.04
YHL009W-AYHL009W-A BUD5P25300 642 aaPredicted RBP2.29□□□□□ -2.04
YHL009W-AYHL009W-A PUP3P25451 205 aaKnown RBP2.29□□□□□ -2.04
YHL009W-AYHL009W-A FRE1P32791 686 aa2.29□□□□□ -2.04
YHL009W-AYHL009W-A SCD6P45978 349 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
YHL009W-AYHL009W-A DSD1P53095 428 aa2.29□□□□□ -2.04
YHL009W-AYHL009W-A RAD30Q04049 632 aa2.29□□□□□ -2.04
YHL009W-AYHL009W-A RPC11Q04307 110 aaPredicted RBP2.29□□□□□ -2.04
YHL009W-AYHL009W-A RRN11Q04712 507 aa2.29□□□□□ -2.04
YHL009W-AYHL009W-A BNA5Q05979 453 aa2.29□□□□□ -2.04
YHL009W-AYHL009W-A CTF3Q12748 733 aa2.29□□□□□ -2.04
YHL009W-AYHL009W-A FAB1P34756 2278 aa2.29□□□□□ -2.04
YHL009W-AYHL009W-A VMA16P23968 213 aa2.28□□□□□ -2.04
YHL009W-AYHL009W-A ADH7P25377 361 aa2.28□□□□□ -2.04
YHL009W-AYHL009W-A YBL055CP34220 418 aaPredicted RBP2.28□□□□□ -2.04
YHL009W-AYHL009W-A PTH2P34222 208 aa2.28□□□□□ -2.04
YHL009W-AYHL009W-A NUP133P36161 1157 aa2.28□□□□□ -2.04
YHL009W-AYHL009W-A RPL32P38061 130 aaKnown RBP2.28□□□□□ -2.04
YHL009W-AYHL009W-A HAT2P39984 401 aa2.28□□□□□ -2.04
YHL009W-AYHL009W-A DPH1P40487 425 aaKnown RBP2.28□□□□□ -2.04
YHL009W-AYHL009W-A LCL3P53153 274 aa2.28□□□□□ -2.04
YHL009W-AYHL009W-A CBK1P53894 756 aa2.28□□□□□ -2.04
YHL009W-AYHL009W-A EFM6P53970 246 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms