RNA–Protein interactions for RNA: YFR056C

YFR056C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR056C, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR056CYFR056C VID24P38263 362 aa2.37□□□□□ -2.03
YFR056CYFR056C YNG2P38806 282 aaKnown RBP2.37□□□□□ -2.03
YFR056CYFR056C SEC31P38968 1273 aaKnown RBP2.37□□□□□ -2.03
YFR056CYFR056C ASG1P40467 964 aa2.37□□□□□ -2.03
YFR056CYFR056C ART5P53244 586 aaKnown RBP2.37□□□□□ -2.03
YFR056CYFR056C RPC11Q04307 110 aaPredicted RBP2.37□□□□□ -2.03
YFR056CYFR056C MRD1Q06106 887 aaKnown RBP2.37□□□□□ -2.03
YFR056CYFR056C YLR345WQ06137 509 aa2.37□□□□□ -2.03
YFR056CYFR056C FRE3Q08905 711 aa2.37□□□□□ -2.03
YFR056CYFR056C YPL272CQ08984 517 aa2.37□□□□□ -2.03
YFR056CYFR056C ATG29Q12092 213 aa2.37□□□□□ -2.03
YFR056CYFR056C INP53Q12271 1107 aa2.37□□□□□ -2.03
YFR056CYFR056C HSP82P02829 709 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C GPA1P08539 472 aa2.36□□□□□ -2.03
YFR056CYFR056C MRP13P12686 339 aa2.36□□□□□ -2.03
YFR056CYFR056C NAT1P12945 854 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C RPL3P14126 387 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C APE1P14904 514 aa2.36□□□□□ -2.03
YFR056CYFR056C PDA1P16387 420 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C CLB1P24868 471 aa2.36□□□□□ -2.03
YFR056CYFR056C ADH7P25377 361 aa2.36□□□□□ -2.03
YFR056CYFR056C IMG1P25626 169 aa2.36□□□□□ -2.03
YFR056CYFR056C WBP1P33767 430 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C PMT1P33775 817 aa2.36□□□□□ -2.03
YFR056CYFR056C TIF3P34167 436 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C APE3P37302 537 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C DIA4P38705 446 aaPredicted RBP2.36□□□□□ -2.03
YFR056CYFR056C LRP1P38801 184 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C YND1P40009 630 aa2.36□□□□□ -2.03
YFR056CYFR056C ALG5P40350 334 aa2.36□□□□□ -2.03
YFR056CYFR056C JEM1P40358 645 aa2.36□□□□□ -2.03
YFR056CYFR056C LCB2P40970 561 aa2.36□□□□□ -2.03
YFR056CYFR056C ROK1P45818 564 aaPredicted RBP2.36□□□□□ -2.03
YFR056CYFR056C HOS2P53096 452 aaPredicted RBP2.36□□□□□ -2.03
YFR056CYFR056C NNF2P53253 936 aa2.36□□□□□ -2.03
YFR056CYFR056C OGG1P53397 376 aaPredicted RBP2.36□□□□□ -2.03
YFR056CYFR056C YNL234WP53857 426 aa2.36□□□□□ -2.03
YFR056CYFR056C BNI5P53890 448 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C ARX1Q03862 593 aaKnown RBP2.36□□□□□ -2.03
YFR056CYFR056C CAC2Q04199 468 aa2.36□□□□□ -2.03
YFR056CYFR056C GYL1Q04322 720 aa2.36□□□□□ -2.03
YFR056CYFR056C YLR455WQ06188 304 aa2.36□□□□□ -2.03
YFR056CYFR056C ATG9Q12142 997 aa2.36□□□□□ -2.03
YFR056CYFR056C AVL9Q12500 764 aa2.36□□□□□ -2.03
YFR056CYFR056C AFI1Q99222 893 aa2.36□□□□□ -2.03
YFR056CYFR056C CBP1P07252 654 aa2.35□□□□□ -2.03
YFR056CYFR056C REC107P21651 314 aa2.35□□□□□ -2.03
YFR056CYFR056C MNE1P24720 663 aa2.35□□□□□ -2.03
YFR056CYFR056C SYN8P31377 255 aa2.35□□□□□ -2.03
YFR056CYFR056C SSE2P32590 693 aaKnown RBP2.35□□□□□ -2.03
YFR056CYFR056C YME1P32795 747 aa2.35□□□□□ -2.03
YFR056CYFR056C CMC1P36064 111 aa2.35□□□□□ -2.03
YFR056CYFR056C RXT2P38255 430 aa2.35□□□□□ -2.03
YFR056CYFR056C OTU2P38747 307 aaKnown RBP2.35□□□□□ -2.03
YFR056CYFR056C ELO1P39540 310 aa2.35□□□□□ -2.03
YFR056CYFR056C UIP3P39547 235 aa2.35□□□□□ -2.03
YFR056CYFR056C PKP1P40530 394 aa2.35□□□□□ -2.03
YFR056CYFR056C HXT14P42833 540 aa2.35□□□□□ -2.03
YFR056CYFR056C ZIM17P42844 174 aa2.35□□□□□ -2.03
YFR056CYFR056C RPN11P43588 306 aaKnown RBP2.35□□□□□ -2.03
YFR056CYFR056C IST1P53843 298 aaPredicted RBP2.35□□□□□ -2.03
YFR056CYFR056C ESBP6P53918 673 aa2.35□□□□□ -2.03
YFR056CYFR056C RPA49Q01080 415 aaPredicted RBP2.35□□□□□ -2.03
YFR056CYFR056C CIK1Q01649 594 aa2.35□□□□□ -2.03
YFR056CYFR056C PFA5Q03289 374 aa2.35□□□□□ -2.03
YFR056CYFR056C YMR254CQ04838 102 aa2.35□□□□□ -2.03
YFR056CYFR056C RTT103Q05543 409 aa2.35□□□□□ -2.03
YFR056CYFR056C TEN1Q07921 160 aa2.35□□□□□ -2.03
YFR056CYFR056C PAR32Q12515 295 aaKnown RBP2.35□□□□□ -2.03
YFR056CYFR056C YER145C-AA0A023PYF4 145 aa2.34□□□□□ -2.03
YFR056CYFR056C CHO1P08456 276 aa2.34□□□□□ -2.03
YFR056CYFR056C RAP1P11938 827 aa2.34□□□□□ -2.03
YFR056CYFR056C PUP3P25451 205 aaKnown RBP2.34□□□□□ -2.03
YFR056CYFR056C YCR051WP25631 222 aa2.34□□□□□ -2.03
YFR056CYFR056C PAP1P29468 568 aaKnown RBP2.34□□□□□ -2.03
YFR056CYFR056C TFB1P32776 642 aa2.34□□□□□ -2.03
YFR056CYFR056C YBL055CP34220 418 aaPredicted RBP2.34□□□□□ -2.03
YFR056CYFR056C SNU114P36048 1008 aaKnown RBP2.34□□□□□ -2.03
YFR056CYFR056C ANS1P38832 159 aa2.34□□□□□ -2.03
YFR056CYFR056C PTR3P43606 678 aa2.34□□□□□ -2.03
YFR056CYFR056C FAR3P46671 204 aa2.34□□□□□ -2.03
YFR056CYFR056C YJL055WP47044 245 aa2.34□□□□□ -2.03
YFR056CYFR056C MNP1P53163 194 aaPredicted RBP2.34□□□□□ -2.03
YFR056CYFR056C YGR016WP53209 190 aa2.34□□□□□ -2.03
YFR056CYFR056C TWF1P53250 332 aa2.34□□□□□ -2.03
YFR056CYFR056C YGR127WP53275 312 aa2.34□□□□□ -2.03
YFR056CYFR056C CAF130P53280 1122 aaPredicted RBP2.34□□□□□ -2.03
YFR056CYFR056C YNL181WP53878 407 aa2.34□□□□□ -2.03
YFR056CYFR056C CRZ1P53968 678 aa2.34□□□□□ -2.03
YFR056CYFR056C EFM6P53970 246 aa2.34□□□□□ -2.03
YFR056CYFR056C PDS5Q04264 1277 aa2.34□□□□□ -2.03
YFR056CYFR056C ROY1Q04847 553 aa2.34□□□□□ -2.03
YFR056CYFR056C FMP45Q07651 309 aa2.34□□□□□ -2.03
YFR056CYFR056C RTT109Q07794 436 aa2.34□□□□□ -2.03
YFR056CYFR056C LEU9Q12166 604 aaKnown RBP2.34□□□□□ -2.03
YFR056CYFR056C PDH1Q12428 516 aaKnown RBP2.34□□□□□ -2.03
YFR056CYFR056C ISN1Q99312 450 aa2.34□□□□□ -2.03
YFR056CYFR056C MDH1P17505 334 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
YFR056CYFR056C HNM1P19807 563 aa2.33□□□□□ -2.04
YFR056CYFR056C SPE2P21182 396 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms