RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	ATC1	Q04005	294 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	LOT6	Q07923	191 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	GEP3	Q08622	556 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	FMP40	Q08968	688 aa	Predicted RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	NBL1	Q3E7Y6	73 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	MSS116	P15424	664 aa	Known RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	TUP1	P16649	713 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	UGA1	P17649	471 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	PPH22	P23595	377 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	MEK1	P24719	497 aa	Predicted RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	URK1	P27515	501 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	CDC15	P27636	974 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	TAT1	P38085	619 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	YHR182W	P38870	785 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	FKH2	P41813	862 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	OTU1	P43558	301 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	GTO1	P48239	356 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	RIB4	P50861	169 aa	Predicted RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	COS12	P53053	380 aa		4.11	□□□□□ -1.75
PTR3	YFR029W	RPT4	P53549	437 aa	Known RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	SLU7	Q02775	382 aa	Known RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	WHI4	Q07655	649 aa	Known RBP	4.11	□□□□□ -1.75
PTR3	YFR029W	LAM4	P38800	1345 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	YLR278C	Q05854	1341 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	SGS1	P35187	1447 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	CDC37	P06101	506 aa	Known RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	ILV5	P06168	395 aa	Known RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	GPA1	P08539	472 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	SSA3	P09435	649 aa	Known RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	KSS1	P14681	368 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	PRP16	P15938	1071 aa	Predicted RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	KGD1	P20967	1014 aa	Known RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	MGR1	P25573	417 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	RDS1	P25611	832 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	SIP1	P32578	815 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	RFC5	P38251	354 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	SIC1	P38634	284 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	SMF2	P38778	549 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	TMN3	P40071	706 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	URM1	P40554	99 aa	Predicted RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	MTR3	P48240	250 aa	Predicted RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	YGR126W	P53274	230 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	DBP6	P53734	629 aa	Known RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	RPM2	Q02773	1202 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	ERV41	Q04651	352 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	CRF1	Q04930	467 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	YLR455W	Q06188	304 aa		4.1	□□□□□ -1.75
PTR3	YFR029W	PRS5	Q12265	496 aa	Known RBP	4.1	□□□□□ -1.75
PTR3	YFR029W	YML003W	P0CF16	290 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	SPO7	P18410	259 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	GID7	P25569	745 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	NDI1	P32340	513 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	IMP3	P32899	183 aa	Predicted RBP	4.09	□□□□□ -1.75
PTR3	YFR029W	PTR2	P32901	601 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	TUL1	P36096	758 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	PZF1	P39933	429 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	YGR149W	P48236	432 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	RMR1	P53060	241 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	ESBP6	P53918	673 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	SRL4	Q03085	281 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	PDS5	Q04264	1277 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	FUS2	Q05670	677 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	RGC1	Q06108	1083 aa	Known RBP	4.09	□□□□□ -1.75
PTR3	YFR029W	VTA1	Q06263	330 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	YFH1	Q07540	174 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	RTT109	Q07794	436 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	GAS5	Q08193	484 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	SIL1	Q08199	421 aa		4.09	□□□□□ -1.75
PTR3	YFR029W	MRP13	P12686	339 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	GAL3	P13045	520 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	ADY2	P25613	283 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	YIH1	P25637	258 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	OCT1	P35999	772 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	TCD1	P38756	429 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	MSS4	P38994	779 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	CIN1	P40987	1014 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	OYE3	P41816	400 aa	Predicted RBP	4.09	□□□□□ -1.76
PTR3	YFR029W	RPA34	P47006	233 aa	Predicted RBP	4.09	□□□□□ -1.76
PTR3	YFR029W	YIP5	P53108	310 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	YGR067C	P53243	804 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	RET3	P53600	189 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	PRM1	P53835	661 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	KTR5	P53966	522 aa	Predicted RBP	4.09	□□□□□ -1.76
PTR3	YFR029W	URH1	Q04179	340 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	CRN1	Q06440	651 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	ARR3	Q06598	404 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	MCM21	Q06675	368 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	VAC14	Q06708	880 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	SRN2	Q99176	213 aa		4.09	□□□□□ -1.76
PTR3	YFR029W	HRP1	Q99383	534 aa	Known RBP	4.09	□□□□□ -1.76
PTR3	YFR029W	SPE1	P08432	466 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	RVS161	P25343	265 aa	Known RBP	4.08	□□□□□ -1.76
PTR3	YFR029W	PET18	P25362	215 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	ADH7	P25377	361 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	BEM1	P29366	551 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	SSE2	P32590	693 aa	Known RBP	4.08	□□□□□ -1.76
PTR3	YFR029W	ZTA1	P38230	334 aa	Known RBP	4.08	□□□□□ -1.76
PTR3	YFR029W	PRM9	P39551	298 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	GET2	P40056	285 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	NET1	P47035	1189 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms