RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	PCL7	P40186	285 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	OPT1	P40897	799 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	YJL107C	P42947	387 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	ERG26	P53199	349 aa	Known RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	CAF130	P53280	1122 aa	Predicted RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	RPT4	P53549	437 aa	Known RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	RPL6A	Q02326	176 aa	Known RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	ADA2	Q02336	434 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	MSC1	Q03104	513 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	ACL4	Q03771	387 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	DBP9	Q06218	594 aa	Known RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	ARO10	Q06408	635 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	KRS1	P15180	591 aa	Known RBP	4.08	□□□□□ -1.76
SPB4	YFL002C	DAP2	P18962	818 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	RPL32	P38061	130 aa	Known RBP	4.08	□□□□□ -1.76
SPB4	YFL002C	GDT1	P38301	280 aa	Predicted RBP	4.08	□□□□□ -1.76
SPB4	YFL002C	WSS1	P38838	269 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	TDA10	P42938	290 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	ALT2	P52892	507 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	YMR178W	Q03219	274 aa	Known RBP	4.08	□□□□□ -1.76
SPB4	YFL002C	YMR160W	Q03823	816 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	PPM1	Q04081	328 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	MGR3	Q04472	501 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	COQ9	Q05779	260 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	CDC45	Q08032	650 aa		4.08	□□□□□ -1.76
SPB4	YFL002C	MRP2	P10663	115 aa	Predicted RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	SPO7	P18410	259 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	BUD5	P25300	642 aa	Predicted RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	YIM1	P28625	365 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	IMD2	P38697	523 aa	Known RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	CIN4	P39110	191 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	CCT7	P42943	550 aa	Known RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	YJL132W	P47014	750 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	YPR003C	P53394	754 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	RHO5	P53879	331 aa	Known RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	YNL058C	P53947	316 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	TOF2	Q02208	771 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	RAD34	Q06665	692 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	SIL1	Q08199	421 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	AEP3	Q12089	606 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	RTC1	Q08281	1341 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	CHO1	P08456	276 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	RAD14	P28519	371 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	ECM27	P47144	725 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	EMI2	Q04409	500 aa	Known RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	PML1	Q07930	204 aa	Predicted RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	MLH2	Q07980	695 aa		4.07	□□□□□ -1.76
SPB4	YFL002C	SLK19	Q08581	821 aa	Known RBP	4.07	□□□□□ -1.76
SPB4	YFL002C	YMR084W	A2P2R3	262 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	RPL7A	P05737	244 aa	Known RBP	4.06	□□□□□ -1.76
SPB4	YFL002C	SPS4	P09937	338 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	PMA2	P19657	947 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	URA4	P20051	364 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	PRP2	P20095	876 aa	Predicted RBP	4.06	□□□□□ -1.76
SPB4	YFL002C	GAC1	P28006	793 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	DBP8	P38719	431 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	CHS6	P40955	746 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	SHE4	P51534	789 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	YNR068C	P53754	272 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	PRO2	P54885	456 aa	Known RBP	4.06	□□□□□ -1.76
SPB4	YFL002C	YMR130W	Q04223	302 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	CYK3	Q07533	885 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	MED2	Q12124	431 aa		4.06	□□□□□ -1.76
SPB4	YFL002C	RPL7B	Q12213	244 aa	Known RBP	4.06	□□□□□ -1.76
SPB4	YFL002C	ARG81	P05085	880 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	RPC40	P07703	335 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	RAP1	P11938	827 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	SRV2	P17555	526 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	CLN1	P20437	546 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	TKL1	P23254	680 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	PMI40	P29952	429 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	AFG1	P32317	509 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	SPC110	P32380	944 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	RIX1	P38883	763 aa	Predicted RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	EXO1	P39875	702 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	ATG27	P46989	271 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	AIM22	P47051	409 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	ASN1	P49089	572 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	HST1	P53685	503 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	SPH1	Q06160	661 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	YLR455W	Q06188	304 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	THI3	Q07471	609 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	RPS10A	Q08745	105 aa	Predicted RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	HER1	Q12276	1246 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	YDR061W	Q12298	539 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	YLR278C	Q05854	1341 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	SUI2	P20459	304 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	SAC1	P32368	623 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	SUR1	P33300	382 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	ANS1	P38832	159 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	MBB1	P39534	108 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	RPS10B	P46784	105 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	TOM22	P49334	152 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	PDR16	P53860	351 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	SLG1	P54867	378 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	RSM23	Q01163	450 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	PFA5	Q03289	374 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	RPN9	Q04062	393 aa	Known RBP	4.05	□□□□□ -1.76
SPB4	YFL002C	ECM30	Q06673	1274 aa		4.05	□□□□□ -1.76
SPB4	YFL002C	RTC5	Q12108	567 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms