RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	AEP1	P32493	518 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	NGG1	P32494	702 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	PTM1	P32857	523 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	MTC2	P34246	357 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	EMC3	P36039	253 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	YBL029W	P38201	376 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	CCZ1	P38273	704 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	TSL1	P38427	1098 aa	Known RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	FHL1	P39521	936 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	YFL054C	P43549	646 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	FMP32	P43557	207 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	LSM3	P57743	89 aa	Known RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	CEG1	Q01159	459 aa	Predicted RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	MTD1	Q02046	320 aa	Known RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	MEH1	Q02205	184 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	TAF12	Q03761	539 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	ENT5	Q03769	411 aa	Known RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	INP2	Q03824	705 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	RPN9	Q04062	393 aa	Known RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	AIM32	Q04689	311 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	DYN3	Q04949	312 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	YDL073W	Q07454	984 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	SLF1	Q12034	447 aa	Known RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	TAF3	Q12297	353 aa		4.7	□□□□□ -1.66
RVB1	YDR190C	HSH49	Q99181	213 aa	Predicted RBP	4.7	□□□□□ -1.66
RVB1	YDR190C	SEM1	O94742	89 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	AMD1	P15274	810 aa	Known RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
RVB1	YDR190C	CCA1	P21269	546 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	MSB1	P21339	1137 aa	Known RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	TRX2	P22803	104 aa	Known RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	URE2	P23202	354 aa	Known RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	MDJ1	P35191	511 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	MRP21	P38175	177 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	TDP1	P38319	544 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	YBR238C	P38330	731 aa	Known RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	GIP4	P39732	760 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	ECM10	P39987	644 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	ELO3	P40319	345 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	CAF16	P43569	289 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	GYP8	P43570	497 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	NIT3	P49954	291 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	MRK1	P50873	501 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	GET1	P53192	235 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	NOP19	P53317	196 aa	Predicted RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	TRM112	P53738	135 aa	Predicted RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	CDC14	Q00684	551 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	RMI1	Q02685	241 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	FMP30	Q02883	468 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	EAR1	Q03212	550 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	GCN5	Q03330	439 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	CDA1	Q06702	301 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	SGT1	Q08446	395 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	MRH1	Q12117	320 aa	Predicted RBP	4.69	□□□□□ -1.66
RVB1	YDR190C	MDY2	Q12285	212 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	RMD5	Q12508	421 aa		4.69	□□□□□ -1.66
RVB1	YDR190C	HAP2	P06774	265 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	SEC53	P07283	254 aa	Known RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	ATR1	P13090	542 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	YSP3	P25036	478 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	YCR090C	P25654	182 aa	Known RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	YCR099C	P25657	155 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	PCL2	P25693	308 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	RPL5	P26321	297 aa	Known RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	FUN30	P31380	1131 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
RVB1	YDR190C	ECM4	P36156	370 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	YHL012W	P38709	493 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	ARN1	P38731	627 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	YHB1	P39676	399 aa	Known RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	ARB1	P40024	610 aa	Known RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	YER158C	P40095	573 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	YJR061W	P40355	935 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	COA1	P40452	197 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	UBP7	P40453	1071 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	ESL1	P40456	1118 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	DLD2	P46681	530 aa	Known RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	YJR154W	P47181	346 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	VMA10	P48836	114 aa	Known RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	GPG1	P53130	126 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	GPI1	P53306	609 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	SLM2	P53955	656 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	MET14	Q02196	202 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	NUP100	Q02629	959 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	GAS3	Q03655	524 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	YDR131C	Q03899	556 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	YDR514C	Q04408	483 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	ECM22	Q05958	814 aa	Predicted RBP	4.68	□□□□□ -1.66
RVB1	YDR190C	ECM30	Q06673	1274 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	NSE1	Q07913	336 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	PGC1	Q08959	321 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	ENV7	Q12003	364 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	UPC2	Q12151	913 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	NTO1	Q12311	748 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	TMA17	Q12513	150 aa		4.68	□□□□□ -1.66
RVB1	YDR190C	SUC2	P00724	532 aa		4.67	□□□□□ -1.66
RVB1	YDR190C	ATP6	P00854	259 aa		4.67	□□□□□ -1.66
RVB1	YDR190C	SNF4	P12904	322 aa		4.67	□□□□□ -1.66
RVB1	YDR190C	ABF1	P14164	731 aa		4.67	□□□□□ -1.66
RVB1	YDR190C	SAM35	P14693	329 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 87.4 ms