RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C YPL014WQ02606 381 aa2.08□□□□□ -2.08
BRE1YDL074C PIR3Q03180 325 aa2.08□□□□□ -2.08
BRE1YDL074C TFB3Q03290 321 aa2.08□□□□□ -2.08
BRE1YDL074C NSE5Q03718 556 aa2.08□□□□□ -2.08
BRE1YDL074C CIA1Q05583 330 aa2.08□□□□□ -2.08
BRE1YDL074C GRS2Q06817 618 aa2.08□□□□□ -2.08
BRE1YDL074C YLL007CQ07799 665 aa2.08□□□□□ -2.08
BRE1YDL074C SLD7Q08457 257 aa2.08□□□□□ -2.08
BRE1YDL074C THI72Q08579 599 aa2.08□□□□□ -2.08
BRE1YDL074C RSA1Q08932 381 aa2.08□□□□□ -2.08
BRE1YDL074C YDR056CQ12025 205 aa2.08□□□□□ -2.08
BRE1YDL074C APC9Q12107 265 aa2.08□□□□□ -2.08
BRE1YDL074C GET4Q12125 312 aa2.08□□□□□ -2.08
BRE1YDL074C RRP42Q12277 265 aaPredicted RBP2.08□□□□□ -2.08
BRE1YDL074C PSY3Q12318 242 aa2.08□□□□□ -2.08
BRE1YDL074C ICT1Q12385 394 aa2.08□□□□□ -2.08
BRE1YDL074C LPX1Q12405 387 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C YOR338WQ99326 363 aa2.08□□□□□ -2.08
BRE1YDL074C STE2D6VTK4 431 aa2.08□□□□□ -2.08
BRE1YDL074C SEC53P07283 254 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C MRP13P12686 339 aa2.08□□□□□ -2.08
BRE1YDL074C PMA2P19657 947 aa2.08□□□□□ -2.08
BRE1YDL074C CCA1P21269 546 aa2.08□□□□□ -2.08
BRE1YDL074C PDE1P22434 369 aa2.08□□□□□ -2.08
BRE1YDL074C SAN1P22470 610 aa2.08□□□□□ -2.08
BRE1YDL074C PPH22P23595 377 aa2.08□□□□□ -2.08
BRE1YDL074C SPB1P25582 841 aaPredicted RBP2.08□□□□□ -2.08
BRE1YDL074C MLS1P30952 554 aa2.08□□□□□ -2.08
BRE1YDL074C CCR4P31384 837 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C NGG1P32494 702 aa2.08□□□□□ -2.08
BRE1YDL074C AIM26P32858 118 aa2.08□□□□□ -2.08
BRE1YDL074C TIP20P33891 701 aa2.08□□□□□ -2.08
BRE1YDL074C SCD5P34758 872 aa2.08□□□□□ -2.08
BRE1YDL074C MRP8P35719 219 aa2.08□□□□□ -2.08
BRE1YDL074C LHS1P36016 881 aa2.08□□□□□ -2.08
BRE1YDL074C SPC42P36094 363 aa2.08□□□□□ -2.08
BRE1YDL074C YLF2P38746 405 aa2.08□□□□□ -2.08
BRE1YDL074C YHR131CP38835 850 aa2.08□□□□□ -2.08
BRE1YDL074C DHH1P39517 506 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C RBG1P39729 369 aa2.08□□□□□ -2.08
BRE1YDL074C SPF1P39986 1215 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C ARB1P40024 610 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C YIL161WP40449 235 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C GCD10P41814 478 aa2.08□□□□□ -2.08
BRE1YDL074C AGP3P43548 558 aa2.08□□□□□ -2.08
BRE1YDL074C FMP32P43557 207 aa2.08□□□□□ -2.08
BRE1YDL074C YJR124CP47159 448 aa2.08□□□□□ -2.08
BRE1YDL074C LYS5P50113 272 aa2.08□□□□□ -2.08
BRE1YDL074C AIM14P53109 570 aa2.08□□□□□ -2.08
BRE1YDL074C GND2P53319 492 aa2.08□□□□□ -2.08
BRE1YDL074C TUB4P53378 473 aa2.08□□□□□ -2.08
BRE1YDL074C ECM9Q02202 377 aa2.08□□□□□ -2.08
BRE1YDL074C HER2Q03557 464 aa2.08□□□□□ -2.08
BRE1YDL074C EFR3Q03653 782 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C YET2Q04210 160 aa2.08□□□□□ -2.08
BRE1YDL074C TY1A-MR1Q04215 440 aa2.08□□□□□ -2.08
BRE1YDL074C RAD33Q04231 177 aa2.08□□□□□ -2.08
BRE1YDL074C PEX12Q04370 399 aa2.08□□□□□ -2.08
BRE1YDL074C SSL1Q04673 461 aaPredicted RBP2.08□□□□□ -2.08
BRE1YDL074C RCO1Q04779 684 aa2.08□□□□□ -2.08
BRE1YDL074C YLR257WQ06146 321 aaKnown RBP2.08□□□□□ -2.08
BRE1YDL074C YCS4Q06156 1176 aa2.08□□□□□ -2.08
BRE1YDL074C YLR049CQ12110 428 aa2.08□□□□□ -2.08
BRE1YDL074C UBX3Q12229 455 aa2.08□□□□□ -2.08
BRE1YDL074C YLL054CQ12244 843 aa2.08□□□□□ -2.08
BRE1YDL074C LCB4Q12246 624 aa2.08□□□□□ -2.08
BRE1YDL074C PEX11Q12462 236 aa2.08□□□□□ -2.08
BRE1YDL074C YOL159C-AQ3E769 90 aa2.08□□□□□ -2.08
BRE1YDL074C ATP4P05626 244 aa2.07□□□□□ -2.08
BRE1YDL074C CPA1P07258 411 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C SPE1P08432 466 aa2.07□□□□□ -2.08
BRE1YDL074C ART10P18634 518 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C CMK2P22517 447 aa2.07□□□□□ -2.08
BRE1YDL074C CNA1P23287 553 aa2.07□□□□□ -2.08
BRE1YDL074C CLB2P24869 491 aa2.07□□□□□ -2.08
BRE1YDL074C PHO84P25297 587 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C RBK1P25332 333 aa2.07□□□□□ -2.08
BRE1YDL074C YCR099CP25657 155 aa2.07□□□□□ -2.08
BRE1YDL074C AAR2P32357 355 aaPredicted RBP2.07□□□□□ -2.08
BRE1YDL074C DPH5P32469 300 aaPredicted RBP2.07□□□□□ -2.08
BRE1YDL074C SPS19P32573 292 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C PTM1P32857 523 aa2.07□□□□□ -2.08
BRE1YDL074C SWE1P32944 819 aa2.07□□□□□ -2.08
BRE1YDL074C PRP18P33411 251 aaPredicted RBP2.07□□□□□ -2.08
BRE1YDL074C PXA2P34230 853 aa2.07□□□□□ -2.08
BRE1YDL074C SPC34P36131 295 aa2.07□□□□□ -2.08
BRE1YDL074C GLG1P36143 616 aa2.07□□□□□ -2.08
BRE1YDL074C YBR056WP38081 501 aa2.07□□□□□ -2.08
BRE1YDL074C YBL029WP38201 376 aa2.07□□□□□ -2.08
BRE1YDL074C RIM4P38741 713 aa2.07□□□□□ -2.08
BRE1YDL074C LRP1P38801 184 aaKnown RBP2.07□□□□□ -2.08
BRE1YDL074C SSN3P39073 555 aa2.07□□□□□ -2.08
BRE1YDL074C EMP65P40085 556 aa2.07□□□□□ -2.08
BRE1YDL074C YTA6P40328 754 aa2.07□□□□□ -2.08
BRE1YDL074C GTS1P40956 396 aa2.07□□□□□ -2.08
BRE1YDL074C TY4A-JP47023 414 aa2.07□□□□□ -2.08
BRE1YDL074C KEL2P50090 882 aa2.07□□□□□ -2.08
BRE1YDL074C COG1P53079 417 aa2.07□□□□□ -2.08
BRE1YDL074C TIM13P53299 105 aa2.07□□□□□ -2.08
BRE1YDL074C COQ6P53318 479 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms